RNA–Protein interactions for RNA: ENST00000364739.1

RNU4-28P-201, Transcript of RNA, U4 small nuclear 28, pseudogene, humanhuman

BASIC

Gene RNU4-28P, Length 141 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-28P-201ENST00000364739 FUSP35637 526 aaKnown RBP eCLIP1.51□□□□□ -2.17
RNU4-28P-201ENST00000364739 HSDL1Q3SXM5 330 aa1.51□□□□□ -2.17
RNU4-28P-201ENST00000364739 Q6ZS52 159 aa1.51□□□□□ -2.17
RNU4-28P-201ENST00000364739 PDPNQ86YL7 162 aa1.51□□□□□ -2.17
RNU4-28P-201ENST00000364739 ARL6IP6Q8N6S5 226 aa1.51□□□□□ -2.17
RNU4-28P-201ENST00000364739 OR56A4Q8NGH8 313 aa1.51□□□□□ -2.17
RNU4-28P-201ENST00000364739 ZNF420Q8TAQ5 688 aaPredicted RBP1.51□□□□□ -2.17
RNU4-28P-201ENST00000364739 RAB1CQ92928 201 aa1.51□□□□□ -2.17
RNU4-28P-201ENST00000364739 RASD2Q96D21 266 aa1.51□□□□□ -2.17
RNU4-28P-201ENST00000364739 ABCG5Q9H222 651 aa1.51□□□□□ -2.17
RNU4-28P-201ENST00000364739 OR2S2Q9NQN1 319 aa1.51□□□□□ -2.17
RNU4-28P-201ENST00000364739 TMCC3Q9ULS5 477 aa1.51□□□□□ -2.17
RNU4-28P-201ENST00000364739 TEX46H3BTG2 121 aa1.5□□□□□ -2.17
RNU4-28P-201ENST00000364739 DNALI1O14645 258 aaPredicted RBP1.5□□□□□ -2.17
RNU4-28P-201ENST00000364739 OR5AC1P0C628 307 aa1.5□□□□□ -2.17
RNU4-28P-201ENST00000364739 NBL1P41271 181 aa1.5□□□□□ -2.17
RNU4-28P-201ENST00000364739 UQCRFS1P47985 274 aa1.5□□□□□ -2.17
RNU4-28P-201ENST00000364739 OR12D2P58182 307 aa1.5□□□□□ -2.17
RNU4-28P-201ENST00000364739 IL5RAQ01344 420 aa1.5□□□□□ -2.17
RNU4-28P-201ENST00000364739 FA2HQ7L5A8 372 aa1.5□□□□□ -2.17
RNU4-28P-201ENST00000364739 ALS2CR12Q96Q35 445 aa1.5□□□□□ -2.17
RNU4-28P-201ENST00000364739 PANX1Q96RD7 426 aa1.5□□□□□ -2.17
RNU4-28P-201ENST00000364739 SFXN3Q9BWM7 321 aa1.5□□□□□ -2.17
RNU4-28P-201ENST00000364739 BAZ1BQ9UIG0 1483 aaKnown RBP1.5□□□□□ -2.17
RNU4-28P-201ENST00000364739 SETD1AO15047 1707 aaKnown RBP1.49□□□□□ -2.17
RNU4-28P-201ENST00000364739 NINLQ9Y2I6 1382 aa1.49□□□□□ -2.17
RNU4-28P-201ENST00000364739 GOLGA6L4A6NEF3 574 aa1.49□□□□□ -2.17
RNU4-28P-201ENST00000364739 CIB2O75838 187 aa1.49□□□□□ -2.17
RNU4-28P-201ENST00000364739 OR2F2O95006 317 aa1.49□□□□□ -2.17
RNU4-28P-201ENST00000364739 KCNK2O95069 426 aa1.49□□□□□ -2.17
RNU4-28P-201ENST00000364739 PRPS1L1P21108 318 aa1.49□□□□□ -2.17
RNU4-28P-201ENST00000364739 OR1G1P47890 313 aa1.49□□□□□ -2.17
RNU4-28P-201ENST00000364739 HHATQ5VTY9 493 aa1.49□□□□□ -2.17
RNU4-28P-201ENST00000364739 LRRC66Q68CR7 880 aa1.49□□□□□ -2.17
RNU4-28P-201ENST00000364739 TAS2R42Q7RTR8 314 aa1.49□□□□□ -2.17
RNU4-28P-201ENST00000364739 VKORC1L1Q8N0U8 176 aa1.49□□□□□ -2.17
RNU4-28P-201ENST00000364739 OR8K3Q8NH51 312 aa1.49□□□□□ -2.17
RNU4-28P-201ENST00000364739 OR51F2Q8NH61 342 aa1.49□□□□□ -2.17
RNU4-28P-201ENST00000364739 FXYD5Q96DB9 178 aa1.49□□□□□ -2.17
RNU4-28P-201ENST00000364739 DERL3Q96Q80 235 aa1.49□□□□□ -2.17
RNU4-28P-201ENST00000364739 TEAD3Q99594 435 aa1.49□□□□□ -2.17
RNU4-28P-201ENST00000364739 ZNF649Q9BS31 505 aa1.49□□□□□ -2.17
RNU4-28P-201ENST00000364739 EMC6Q9BV81 110 aa1.49□□□□□ -2.17
RNU4-28P-201ENST00000364739 SND1-IT1Q9HBX3 110 aa1.49□□□□□ -2.17
RNU4-28P-201ENST00000364739 ZNF160Q9HCG1 818 aa1.49□□□□□ -2.17
RNU4-28P-201ENST00000364739 PLXNB3Q9ULL4 1909 aa1.48□□□□□ -2.17
RNU4-28P-201ENST00000364739 VWDEQ8N2E2 1590 aa1.48□□□□□ -2.17
RNU4-28P-201ENST00000364739 IGKV1OR2-108A0A075B7D4 117 aa1.48□□□□□ -2.17
RNU4-28P-201ENST00000364739 CDH16O75309 829 aa1.48□□□□□ -2.17
RNU4-28P-201ENST00000364739 LCA5LO95447 670 aa1.48□□□□□ -2.17
RNU4-28P-201ENST00000364739 RPS15AP62244 130 aaKnown RBP1.48□□□□□ -2.17
RNU4-28P-201ENST00000364739 FAM104BQ5XKR9 115 aa1.48□□□□□ -2.17
RNU4-28P-201ENST00000364739 RAB43Q86YS6 212 aa1.48□□□□□ -2.17
RNU4-28P-201ENST00000364739 LRRC8AQ8IWT6 810 aa1.48□□□□□ -2.17
RNU4-28P-201ENST00000364739 ZFP62Q8NB50 900 aaPredicted RBP1.48□□□□□ -2.17
RNU4-28P-201ENST00000364739 ITLN2Q8WWU7 325 aaPredicted RBP1.48□□□□□ -2.17
RNU4-28P-201ENST00000364739 ZNF606Q8WXB4 792 aa1.48□□□□□ -2.17
RNU4-28P-201ENST00000364739 NRGNQ92686 78 aa1.48□□□□□ -2.17
RNU4-28P-201ENST00000364739 C8orf44Q96CB5 159 aa1.48□□□□□ -2.17
RNU4-28P-201ENST00000364739 YIPF6Q96EC8 236 aa1.48□□□□□ -2.17
RNU4-28P-201ENST00000364739 CALN1Q9BXU9 219 aa1.48□□□□□ -2.17
RNU4-28P-201ENST00000364739 FBXO8Q9NRD0 319 aa1.48□□□□□ -2.17
RNU4-28P-201ENST00000364739 INIPQ9NRY2 104 aa1.48□□□□□ -2.17
RNU4-28P-201ENST00000364739 CES1P1Q9UKY3 287 aa1.48□□□□□ -2.17
RNU4-28P-201ENST00000364739 ZNF257Q9Y2Q1 563 aa1.48□□□□□ -2.17
RNU4-28P-201ENST00000364739 ICE1Q9Y2F5 2266 aa1.47□□□□□ -2.17
RNU4-28P-201ENST00000364739 H3BQ85 93 aa1.47□□□□□ -2.17
RNU4-28P-201ENST00000364739 PSPHP1O15172 72 aa1.47□□□□□ -2.17
RNU4-28P-201ENST00000364739 ERI3O43414 337 aaKnown RBP1.47□□□□□ -2.17
RNU4-28P-201ENST00000364739 FARS2O95363 451 aaKnown RBP1.47□□□□□ -2.17
RNU4-28P-201ENST00000364739 SEC11BP0C7V7 166 aa1.47□□□□□ -2.17
RNU4-28P-201ENST00000364739 RAB5AP20339 215 aa1.47□□□□□ -2.17
RNU4-28P-201ENST00000364739 OTX1P32242 354 aaPredicted RBP1.47□□□□□ -2.17
RNU4-28P-201ENST00000364739 ZNF33AQ06730 810 aa1.47□□□□□ -2.17
RNU4-28P-201ENST00000364739 OR1Q1Q15612 314 aa1.47□□□□□ -2.17
RNU4-28P-201ENST00000364739 ZNF181Q2M3W8 571 aa1.47□□□□□ -2.17
RNU4-28P-201ENST00000364739 KLHL40Q2TBA0 621 aa1.47□□□□□ -2.17
RNU4-28P-201ENST00000364739 CCDC183Q5T5S1 534 aa1.47□□□□□ -2.17
RNU4-28P-201ENST00000364739 ARMC12Q5T9G4 340 aa1.47□□□□□ -2.17
RNU4-28P-201ENST00000364739 OR2T5Q6IEZ7 315 aa1.47□□□□□ -2.17
RNU4-28P-201ENST00000364739 METAP1DQ6UB28 335 aaPredicted RBP1.47□□□□□ -2.17
RNU4-28P-201ENST00000364739 PAGE2Q7Z2X7 111 aa1.47□□□□□ -2.17
RNU4-28P-201ENST00000364739 OR2T29Q8NH02 315 aa1.47□□□□□ -2.17
RNU4-28P-201ENST00000364739 RXFP2Q8WXD0 754 aa1.47□□□□□ -2.17
RNU4-28P-201ENST00000364739 TMEM100Q9NV29 134 aa1.47□□□□□ -2.17
RNU4-28P-201ENST00000364739 LYARQ9NX58 379 aaKnown RBP1.47□□□□□ -2.17
RNU4-28P-201ENST00000364739 STX18Q9P2W9 335 aaKnown RBP1.47□□□□□ -2.17
RNU4-28P-201ENST00000364739 ZNF608Q9ULD9 1512 aaPredicted RBP1.46□□□□□ -2.18
RNU4-28P-201ENST00000364739 ZNF73O43830 326 aaPredicted RBP1.46□□□□□ -2.18
RNU4-28P-201ENST00000364739 CTNSO60931 367 aa1.46□□□□□ -2.18
RNU4-28P-201ENST00000364739 WBP4O75554 376 aaKnown RBP1.46□□□□□ -2.18
RNU4-28P-201ENST00000364739 CBR1P16152 277 aa1.46□□□□□ -2.18
RNU4-28P-201ENST00000364739 SLC1A2P43004 574 aa1.46□□□□□ -2.18
RNU4-28P-201ENST00000364739 RGS6P49758 472 aa1.46□□□□□ -2.18
RNU4-28P-201ENST00000364739 FOXA1P55317 472 aa1.46□□□□□ -2.18
RNU4-28P-201ENST00000364739 C21orf59P57076 290 aa1.46□□□□□ -2.18
RNU4-28P-201ENST00000364739 RGS8P57771 180 aaPredicted RBP1.46□□□□□ -2.18
RNU4-28P-201ENST00000364739 INCA1Q0VD86 236 aa1.46□□□□□ -2.18
RNU4-28P-201ENST00000364739 TPBGQ13641 420 aa1.46□□□□□ -2.18
RNU4-28P-201ENST00000364739 TSC22D1Q15714 1073 aa1.46□□□□□ -2.18
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms