RNA–Protein interactions for RNA: ENST00000364738.1

RNU4-42P-201, Transcript of RNA, U4 small nuclear 42, pseudogene, humanhuman

BASIC

Gene RNU4-42P, Length 142 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-42P-201ENST00000364738 KLF6Q99612 283 aaPredicted RBP1.52□□□□□ -2.17
RNU4-42P-201ENST00000364738 APOL4Q9BPW4 351 aa1.52□□□□□ -2.17
RNU4-42P-201ENST00000364738 MICU1Q9BPX6 476 aa1.52□□□□□ -2.17
RNU4-42P-201ENST00000364738 FEM1AQ9BSK4 669 aa1.52□□□□□ -2.17
RNU4-42P-201ENST00000364738 KATNB1Q9BVA0 655 aa1.52□□□□□ -2.17
RNU4-42P-201ENST00000364738 RIOK2Q9BVS4 552 aaKnown RBP1.52□□□□□ -2.17
RNU4-42P-201ENST00000364738 UGT2B28Q9BY64 529 aa1.52□□□□□ -2.17
RNU4-42P-201ENST00000364738 TLNRD1Q9H1K6 362 aa1.52□□□□□ -2.17
RNU4-42P-201ENST00000364738 DCSTAMPQ9H295 470 aa1.52□□□□□ -2.17
RNU4-42P-201ENST00000364738 RPF2Q9H7B2 306 aaKnown RBP1.52□□□□□ -2.17
RNU4-42P-201ENST00000364738 C6orf50Q9HD87 102 aa1.52□□□□□ -2.17
RNU4-42P-201ENST00000364738 RAB18Q9NP72 206 aa1.52□□□□□ -2.17
RNU4-42P-201ENST00000364738 MIEF1Q9NQG6 463 aa1.52□□□□□ -2.17
RNU4-42P-201ENST00000364738 CTNNBIP1Q9NSA3 81 aaPredicted RBP1.52□□□□□ -2.17
RNU4-42P-201ENST00000364738 PIGVQ9NUD9 493 aa1.52□□□□□ -2.17
RNU4-42P-201ENST00000364738 FAM49BQ9NUQ9 324 aa1.52□□□□□ -2.17
RNU4-42P-201ENST00000364738 NLE1Q9NVX2 485 aaPredicted RBP1.52□□□□□ -2.17
RNU4-42P-201ENST00000364738 NECAP2Q9NVZ3 263 aa1.52□□□□□ -2.17
RNU4-42P-201ENST00000364738 RASL12Q9NYN1 266 aa1.52□□□□□ -2.17
RNU4-42P-201ENST00000364738 TAS2R13Q9NYV9 303 aa1.52□□□□□ -2.17
RNU4-42P-201ENST00000364738 OR12D3Q9UGF7 316 aa1.52□□□□□ -2.17
RNU4-42P-201ENST00000364738 ZNF391Q9UJN7 358 aa1.52□□□□□ -2.17
RNU4-42P-201ENST00000364738 ZNF223Q9UK11 482 aaPredicted RBP1.52□□□□□ -2.17
RNU4-42P-201ENST00000364738 EMCNQ9ULC0 261 aa1.52□□□□□ -2.17
RNU4-42P-201ENST00000364738 FOXA2Q9Y261 457 aaPredicted RBP1.52□□□□□ -2.17
RNU4-42P-201ENST00000364738 PPIAL4AQ9Y536 164 aa1.52□□□□□ -2.17
RNU4-42P-201ENST00000364738 RBM7Q9Y580 266 aaKnown RBP1.52□□□□□ -2.17
RNU4-42P-201ENST00000364738 PCYT1BQ9Y5K3 369 aaPredicted RBP1.52□□□□□ -2.17
RNU4-42P-201ENST00000364738 TSSC4Q9Y5U2 329 aaPredicted RBP1.52□□□□□ -2.17
RNU4-42P-201ENST00000364738 PEX16Q9Y5Y5 336 aa1.52□□□□□ -2.17
RNU4-42P-201ENST00000364738 LAMC1P11047 1609 aa1.51□□□□□ -2.17
RNU4-42P-201ENST00000364738 SYNMO15061 1565 aa1.51□□□□□ -2.17
RNU4-42P-201ENST00000364738 EPRSP07814 1512 aaKnown RBP1.51□□□□□ -2.17
RNU4-42P-201ENST00000364738 TEX14Q8IWB6 1497 aa1.51□□□□□ -2.17
RNU4-42P-201ENST00000364738 MLH3Q9UHC1 1453 aa1.51□□□□□ -2.17
RNU4-42P-201ENST00000364738 C9orf84Q5VXU9 1444 aa1.51□□□□□ -2.17
RNU4-42P-201ENST00000364738 FLT4P35916 1363 aa1.51□□□□□ -2.17
RNU4-42P-201ENST00000364738 PCM1Q15154 2024 aa1.51□□□□□ -2.17
RNU4-42P-201ENST00000364738 CHD5Q8TDI0 1954 aa1.51□□□□□ -2.17
RNU4-42P-201ENST00000364738 A0A087WXM4 84 aa1.51□□□□□ -2.17
RNU4-42P-201ENST00000364738 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP1.51□□□□□ -2.17
RNU4-42P-201ENST00000364738 TGIF2-C20orf24A0A0A6YYL0 155 aa1.51□□□□□ -2.17
RNU4-42P-201ENST00000364738 KBTBD11-OT1A0A1B0GTJ5 212 aa1.51□□□□□ -2.17
RNU4-42P-201ENST00000364738 PNMA8CA0A1B0GUJ8 204 aa1.51□□□□□ -2.17
RNU4-42P-201ENST00000364738 PSMB11A5LHX3 300 aa1.51□□□□□ -2.17
RNU4-42P-201ENST00000364738 OR6C6A6NF89 314 aa1.51□□□□□ -2.17
RNU4-42P-201ENST00000364738 ARL5CA6NH57 179 aa1.51□□□□□ -2.17
RNU4-42P-201ENST00000364738 VSTM2BA6NLU5 285 aa1.51□□□□□ -2.17
RNU4-42P-201ENST00000364738 HIDE1A8MVS5 230 aa1.51□□□□□ -2.17
RNU4-42P-201ENST00000364738 PPP5D1E7EU14 171 aa1.51□□□□□ -2.17
RNU4-42P-201ENST00000364738 F6UZH7 168 aa1.51□□□□□ -2.17
RNU4-42P-201ENST00000364738 TMX2-CTNND1H3BSU7 103 aa1.51□□□□□ -2.17
RNU4-42P-201ENST00000364738 H7C417 338 aa1.51□□□□□ -2.17
RNU4-42P-201ENST00000364738 M0QXV9 152 aa1.51□□□□□ -2.17
RNU4-42P-201ENST00000364738 DNASE2O00115 360 aaPredicted RBP1.51□□□□□ -2.17
RNU4-42P-201ENST00000364738 DLGAP1O14490 977 aa1.51□□□□□ -2.17
RNU4-42P-201ENST00000364738 EI24O14681 340 aa1.51□□□□□ -2.17
RNU4-42P-201ENST00000364738 AZIN1O14977 448 aa1.51□□□□□ -2.17
RNU4-42P-201ENST00000364738 CTDSPLO15194 276 aa1.51□□□□□ -2.17
RNU4-42P-201ENST00000364738 SIVA1O15304 175 aa1.51□□□□□ -2.17
RNU4-42P-201ENST00000364738 MSH4O15457 936 aa1.51□□□□□ -2.17
RNU4-42P-201ENST00000364738 MLNRO43193 412 aa1.51□□□□□ -2.17
RNU4-42P-201ENST00000364738 B4GALT5O43286 388 aa1.51□□□□□ -2.17
RNU4-42P-201ENST00000364738 RAD51CO43502 376 aa1.51□□□□□ -2.17
RNU4-42P-201ENST00000364738 SSNA1O43805 119 aa1.51□□□□□ -2.17
RNU4-42P-201ENST00000364738 PDE6DO43924 150 aa1.51□□□□□ -2.17
RNU4-42P-201ENST00000364738 TIMM8AO60220 97 aaPredicted RBP1.51□□□□□ -2.17
RNU4-42P-201ENST00000364738 NME6O75414 186 aaPredicted RBP1.51□□□□□ -2.17
RNU4-42P-201ENST00000364738 HSBP1O75506 76 aa1.51□□□□□ -2.17
RNU4-42P-201ENST00000364738 PIAS1O75925 651 aa1.51□□□□□ -2.17
RNU4-42P-201ENST00000364738 TM7SF2O76062 418 aa1.51□□□□□ -2.17
RNU4-42P-201ENST00000364738 GADD45GO95257 159 aa1.51□□□□□ -2.17
RNU4-42P-201ENST00000364738 CNIH1O95406 144 aa1.51□□□□□ -2.17
RNU4-42P-201ENST00000364738 TMEM50AO95807 157 aa1.51□□□□□ -2.17
RNU4-42P-201ENST00000364738 TSPAN13O95857 204 aa1.51□□□□□ -2.17
RNU4-42P-201ENST00000364738 ACTL6AO96019 429 aa1.51□□□□□ -2.17
RNU4-42P-201ENST00000364738 CST1P01037 141 aa1.51□□□□□ -2.17
RNU4-42P-201ENST00000364738 ISG15P05161 165 aa1.51□□□□□ -2.17
RNU4-42P-201ENST00000364738 CA3P07451 260 aa1.51□□□□□ -2.17
RNU4-42P-201ENST00000364738 MYL2P10916 166 aa1.51□□□□□ -2.17
RNU4-42P-201ENST00000364738 ZNF250P15622 560 aa1.51□□□□□ -2.17
RNU4-42P-201ENST00000364738 NELFEP18615 380 aaKnown RBP1.51□□□□□ -2.17
RNU4-42P-201ENST00000364738 CELP19835 753 aa1.51□□□□□ -2.17
RNU4-42P-201ENST00000364738 TPSB2P20231 275 aa1.51□□□□□ -2.17
RNU4-42P-201ENST00000364738 FUT3P21217 361 aa1.51□□□□□ -2.17
RNU4-42P-201ENST00000364738 TBXA2RP21731 343 aa1.51□□□□□ -2.17
RNU4-42P-201ENST00000364738 CXCR1P25024 350 aa1.51□□□□□ -2.17
RNU4-42P-201ENST00000364738 SSTR1P30872 391 aa1.51□□□□□ -2.17
RNU4-42P-201ENST00000364738 TIA1P31483 386 aaKnown RBP eCLIP1.51□□□□□ -2.17
RNU4-42P-201ENST00000364738 CFHR2P36980 270 aa1.51□□□□□ -2.17
RNU4-42P-201ENST00000364738 COILP38432 576 aaPredicted RBP1.51□□□□□ -2.17
RNU4-42P-201ENST00000364738 RBM34P42696 430 aaKnown RBP1.51□□□□□ -2.17
RNU4-42P-201ENST00000364738 TNFRSF4P43489 277 aa1.51□□□□□ -2.17
RNU4-42P-201ENST00000364738 MAP2K4P45985 399 aa1.51□□□□□ -2.17
RNU4-42P-201ENST00000364738 EVX1P49640 407 aa1.51□□□□□ -2.17
RNU4-42P-201ENST00000364738 TNFSF10P50591 281 aa1.51□□□□□ -2.17
RNU4-42P-201ENST00000364738 TDGF1P3P51864 188 aa1.51□□□□□ -2.17
RNU4-42P-201ENST00000364738 OR2B8PP59922 312 aa1.51□□□□□ -2.17
RNU4-42P-201ENST00000364738 RRAS2P62070 204 aaPredicted RBP1.51□□□□□ -2.17
RNU4-42P-201ENST00000364738 TBPL1P62380 186 aa1.51□□□□□ -2.17
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms