RNA–Protein interactions for RNA: ENST00000360718.5

SQSTM1-201, Transcript of sequestosome 1, humanhuman

TSL 1 (best) BASIC

Gene SQSTM1, Length 2,253 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQSTM1-201ENST00000360718 KDM4BO94953 1096 aa11.53□□□□□ -0.56
SQSTM1-201ENST00000360718 SIX6O95475 246 aa11.53□□□□□ -0.56
SQSTM1-201ENST00000360718 DUX4L2P0CJ85 424 aa11.53□□□□□ -0.56
SQSTM1-201ENST00000360718 DUX4L3P0CJ86 424 aa11.53□□□□□ -0.56
SQSTM1-201ENST00000360718 DUX4L4P0CJ87 422 aa11.53□□□□□ -0.56
SQSTM1-201ENST00000360718 DUX4L5P0CJ88 424 aa11.53□□□□□ -0.56
SQSTM1-201ENST00000360718 DUX4L6P0CJ89 424 aa11.53□□□□□ -0.56
SQSTM1-201ENST00000360718 DUX4L7P0CJ90 424 aa11.53□□□□□ -0.56
SQSTM1-201ENST00000360718 MSR1P21757 451 aa11.53□□□□□ -0.56
SQSTM1-201ENST00000360718 H2BFSP57053 126 aa11.53□□□□□ -0.56
SQSTM1-201ENST00000360718 RIPPLY2Q5TAB7 128 aa11.53□□□□□ -0.56
SQSTM1-201ENST00000360718 GSG1LQ6UXU4 331 aa11.53□□□□□ -0.56
SQSTM1-201ENST00000360718 ZNF627Q7L945 461 aa11.53□□□□□ -0.56
SQSTM1-201ENST00000360718 ZC3HAV1Q7Z2W4 902 aaKnown RBP11.53□□□□□ -0.56
SQSTM1-201ENST00000360718 P4HA3Q7Z4N8 544 aa11.53□□□□□ -0.56
SQSTM1-201ENST00000360718 HIST2H2ABQ8IUE6 130 aaPredicted RBP11.53□□□□□ -0.56
SQSTM1-201ENST00000360718 OR4D10Q8NGI6 311 aa11.53□□□□□ -0.56
SQSTM1-201ENST00000360718 FOXRED1Q96CU9 486 aaPredicted RBP11.53□□□□□ -0.56
SQSTM1-201ENST00000360718 DOCK7Q96N67 2140 aa11.53□□□□□ -0.56
SQSTM1-201ENST00000360718 NELFAQ9H3P2 528 aa11.53□□□□□ -0.56
SQSTM1-201ENST00000360718 CALHM2Q9HA72 323 aa11.53□□□□□ -0.56
SQSTM1-201ENST00000360718 BCO1Q9HAY6 547 aa11.53□□□□□ -0.56
SQSTM1-201ENST00000360718 MYOZ1Q9NP98 299 aaPredicted RBP11.53□□□□□ -0.56
SQSTM1-201ENST00000360718 ZNF71Q9NQZ8 489 aaPredicted RBP11.53□□□□□ -0.56
SQSTM1-201ENST00000360718 DUX4Q9UBX2 424 aa11.53□□□□□ -0.56
SQSTM1-201ENST00000360718 CYB5R1Q9UHQ9 305 aa11.53□□□□□ -0.56
SQSTM1-201ENST00000360718 HHLA2Q9UM44 414 aa11.53□□□□□ -0.56
SQSTM1-201ENST00000360718 MED19A0JLT2 244 aaPredicted RBP11.53□□□□□ -0.56
SQSTM1-201ENST00000360718 H3BUI4 141 aa11.53□□□□□ -0.56
SQSTM1-201ENST00000360718 SCO1O75880 301 aa11.53□□□□□ -0.56
SQSTM1-201ENST00000360718 PNPP00491 289 aa11.53□□□□□ -0.56
SQSTM1-201ENST00000360718 FAM87AP0C7U9 286 aa11.53□□□□□ -0.56
SQSTM1-201ENST00000360718 CD37P11049 281 aa11.53□□□□□ -0.56
SQSTM1-201ENST00000360718 LSM6P62312 80 aaKnown RBP11.53□□□□□ -0.56
SQSTM1-201ENST00000360718 FGL1Q08830 312 aa11.53□□□□□ -0.56
SQSTM1-201ENST00000360718 OR7E24Q6IFN5 339 aa11.53□□□□□ -0.56
SQSTM1-201ENST00000360718 DEGS2Q6QHC5 323 aa11.53□□□□□ -0.56
SQSTM1-201ENST00000360718 ZNF704Q6ZNC4 412 aaPredicted RBP11.53□□□□□ -0.56
SQSTM1-201ENST00000360718 TUSC5Q8IXB3 177 aa11.53□□□□□ -0.56
SQSTM1-201ENST00000360718 C12orf45Q8N5I9 185 aaPredicted RBP11.53□□□□□ -0.56
SQSTM1-201ENST00000360718 PLPP7Q8NBV4 271 aa11.53□□□□□ -0.56
SQSTM1-201ENST00000360718 SLC25A28Q96A46 364 aa11.53□□□□□ -0.56
SQSTM1-201ENST00000360718 CRLF2Q9HC73 371 aa11.53□□□□□ -0.56
SQSTM1-201ENST00000360718 PLSCR2Q9NRY7 297 aa11.53□□□□□ -0.56
SQSTM1-201ENST00000360718 TMEM82A0PJX8 343 aa11.52□□□□□ -0.56
SQSTM1-201ENST00000360718 MEIS3P1A6NDR6 274 aa11.52□□□□□ -0.56
SQSTM1-201ENST00000360718 MFSD2BA6NFX1 497 aa11.52□□□□□ -0.56
SQSTM1-201ENST00000360718 H2BFMP0C1H6 154 aa11.52□□□□□ -0.56
SQSTM1-201ENST00000360718 RPA2P15927 270 aa11.52□□□□□ -0.56
SQSTM1-201ENST00000360718 IGFBP3P17936 291 aaPredicted RBP11.52□□□□□ -0.56
SQSTM1-201ENST00000360718 AGTR1P30556 359 aa11.52□□□□□ -0.56
SQSTM1-201ENST00000360718 GLYATL3Q5SZD4 288 aa11.52□□□□□ -0.56
SQSTM1-201ENST00000360718 CORO6Q6QEF8 472 aa11.52□□□□□ -0.56
SQSTM1-201ENST00000360718 UNQ6494/PRO21346Q6UXR6 183 aa11.52□□□□□ -0.56
SQSTM1-201ENST00000360718 COQ8AQ8NI60 647 aa11.52□□□□□ -0.56
SQSTM1-201ENST00000360718 CPT1CQ8TCG5 803 aa11.52□□□□□ -0.56
SQSTM1-201ENST00000360718 ST7LQ8TDW4 575 aa11.52□□□□□ -0.56
SQSTM1-201ENST00000360718 PTX4Q96A99 478 aa11.52□□□□□ -0.56
SQSTM1-201ENST00000360718 SEH1LQ96EE3 360 aa11.52□□□□□ -0.56
SQSTM1-201ENST00000360718 ZNF837Q96EG3 531 aaPredicted RBP11.52□□□□□ -0.56
SQSTM1-201ENST00000360718 REG4Q9BYZ8 158 aa11.52□□□□□ -0.56
SQSTM1-201ENST00000360718 MFFQ9GZY8 342 aa11.52□□□□□ -0.56
SQSTM1-201ENST00000360718 GP6Q9HCN6 339 aa11.52□□□□□ -0.56
SQSTM1-201ENST00000360718 CENPMQ9NSP4 180 aa11.52□□□□□ -0.56
SQSTM1-201ENST00000360718 TAS2R4Q9NYW5 299 aa11.52□□□□□ -0.56
SQSTM1-201ENST00000360718 LRP12Q9Y561 859 aa11.52□□□□□ -0.56
SQSTM1-201ENST00000360718 R4GMQ9 66 aa11.52□□□□□ -0.56
SQSTM1-201ENST00000360718 OR14I1A6ND48 311 aa11.52□□□□□ -0.57
SQSTM1-201ENST00000360718 RFPL4AA6NLU0 287 aa11.52□□□□□ -0.57
SQSTM1-201ENST00000360718 RFPL4AL1F8VTS6 287 aa11.52□□□□□ -0.57
SQSTM1-201ENST00000360718 CYB5AP00167 134 aa11.52□□□□□ -0.57
SQSTM1-201ENST00000360718 NMBP08949 121 aa11.52□□□□□ -0.57
SQSTM1-201ENST00000360718 OR4E1P0C645 316 aa11.52□□□□□ -0.57
SQSTM1-201ENST00000360718 ACHEP22303 614 aa11.52□□□□□ -0.57
SQSTM1-201ENST00000360718 NUP62P37198 522 aaPredicted RBP11.52□□□□□ -0.57
SQSTM1-201ENST00000360718 SFRP5Q5T4F7 317 aa11.52□□□□□ -0.57
SQSTM1-201ENST00000360718 TMEM244Q5VVB8 128 aa11.52□□□□□ -0.57
SQSTM1-201ENST00000360718 FAM180AQ6UWF9 173 aa11.52□□□□□ -0.57
SQSTM1-201ENST00000360718 FOXL2NBQ6ZUU3 175 aa11.52□□□□□ -0.57
SQSTM1-201ENST00000360718 ADGRE4PQ86SQ3 457 aa11.52□□□□□ -0.57
SQSTM1-201ENST00000360718 PDZD9Q8IXQ8 264 aa11.52□□□□□ -0.57
SQSTM1-201ENST00000360718 OR13C3Q8NGS6 347 aa11.52□□□□□ -0.57
SQSTM1-201ENST00000360718 OR6K3Q8NGY3 331 aa11.52□□□□□ -0.57
SQSTM1-201ENST00000360718 DVL3Q92997 716 aaPredicted RBP11.52□□□□□ -0.57
SQSTM1-201ENST00000360718 WDR89Q96FK6 387 aaPredicted RBP11.52□□□□□ -0.57
SQSTM1-201ENST00000360718 ALKBH3Q96Q83 286 aaPredicted RBP11.52□□□□□ -0.57
SQSTM1-201ENST00000360718 POFUT1Q9H488 388 aa11.52□□□□□ -0.57
SQSTM1-201ENST00000360718 ASH2LQ9UBL3 628 aa11.52□□□□□ -0.57
SQSTM1-201ENST00000360718 GLS2Q9UI32 602 aa11.52□□□□□ -0.57
SQSTM1-201ENST00000360718 GDF2Q9UK05 429 aaPredicted RBP11.52□□□□□ -0.57
SQSTM1-201ENST00000360718 LHFPL6Q9Y693 200 aa11.52□□□□□ -0.57
SQSTM1-201ENST00000360718 METTL21EPA6NDL7 271 aa11.51□□□□□ -0.57
SQSTM1-201ENST00000360718 ISG15P05161 165 aa11.51□□□□□ -0.57
SQSTM1-201ENST00000360718 MRPS34P82930 218 aaKnown RBP11.51□□□□□ -0.57
SQSTM1-201ENST00000360718 MFGE8Q08431 387 aaPredicted RBP11.51□□□□□ -0.57
SQSTM1-201ENST00000360718 TAF13Q15543 124 aa11.51□□□□□ -0.57
SQSTM1-201ENST00000360718 C2orf68Q2NKX9 166 aa11.51□□□□□ -0.57
SQSTM1-201ENST00000360718 LIN54Q6MZP7 749 aa11.51□□□□□ -0.57
SQSTM1-201ENST00000360718 ALKAL2Q6UX46 152 aa11.51□□□□□ -0.57
SQSTM1-201ENST00000360718 BIVMQ86UB2 503 aa11.51□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms