RNA–Protein interactions for RNA: ENST00000360228.10

CACNA1A-201, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene CACNA1A, Length 8,627 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-201ENST00000360228 SIT1Q9Y3P8 196 aa15.71■□□□□ 0.11
CACNA1A-201ENST00000360228 CLEC2LP0C7M8 214 aa15.71■□□□□ 0.11
CACNA1A-201ENST00000360228 ADAT1Q9BUB4 502 aaKnown RBP15.71■□□□□ 0.11
CACNA1A-201ENST00000360228 HOXC11O43248 304 aaPredicted RBP15.71■□□□□ 0.1
CACNA1A-201ENST00000360228 OR52N1Q8NH53 320 aa15.71■□□□□ 0.1
CACNA1A-201ENST00000360228 COPS9Q8WXC6 57 aa15.71■□□□□ 0.1
CACNA1A-201ENST00000360228 M0R135 149 aa15.71■□□□□ 0.1
CACNA1A-201ENST00000360228 XRCC2O43543 280 aa15.71■□□□□ 0.1
CACNA1A-201ENST00000360228 CSNK1EP49674 416 aaKnown RBP15.71■□□□□ 0.1
CACNA1A-201ENST00000360228 OR2A2Q6IF42 318 aa15.71■□□□□ 0.1
CACNA1A-201ENST00000360228 ZNF799Q96GE5 643 aa15.71■□□□□ 0.1
CACNA1A-201ENST00000360228 NPAS1Q99742 590 aa15.71■□□□□ 0.1
CACNA1A-201ENST00000360228 COL14A1Q05707 1796 aaKnown RBP15.7■□□□□ 0.1
CACNA1A-201ENST00000360228 PPP6CO00743 305 aa15.7■□□□□ 0.1
CACNA1A-201ENST00000360228 CAMPP49913 170 aa15.7■□□□□ 0.1
CACNA1A-201ENST00000360228 WBP2Q969T9 261 aa15.7■□□□□ 0.1
CACNA1A-201ENST00000360228 C16orf70Q9BSU1 422 aa15.7■□□□□ 0.1
CACNA1A-201ENST00000360228 TMEM191AQ9H0A3 160 aa15.7■□□□□ 0.1
CACNA1A-201ENST00000360228 ABCA4P78363 2273 aa15.7■□□□□ 0.1
CACNA1A-201ENST00000360228 FZD6O60353 706 aa15.7■□□□□ 0.1
CACNA1A-201ENST00000360228 TFAP2AP05549 437 aa15.7■□□□□ 0.1
CACNA1A-201ENST00000360228 HOXA4Q00056 320 aaPredicted RBP15.7■□□□□ 0.1
CACNA1A-201ENST00000360228 AANATQ16613 207 aa15.7■□□□□ 0.1
CACNA1A-201ENST00000360228 ARFGAP1Q8N6T3 406 aa15.7■□□□□ 0.1
CACNA1A-201ENST00000360228 SLAMF6Q96DU3 332 aa15.7■□□□□ 0.1
CACNA1A-201ENST00000360228 ZNF749O43361 778 aa15.7■□□□□ 0.1
CACNA1A-201ENST00000360228 HLA-BQ31612 363 aa15.7■□□□□ 0.1
CACNA1A-201ENST00000360228 SLC39A5Q6ZMH5 540 aa15.7■□□□□ 0.1
CACNA1A-201ENST00000360228 CALHM3Q86XJ0 350 aa15.7■□□□□ 0.1
CACNA1A-201ENST00000360228 KCNE4Q8WWG9 221 aa15.7■□□□□ 0.1
CACNA1A-201ENST00000360228 TIMM10BQ9Y5J6 103 aa15.7■□□□□ 0.1
CACNA1A-201ENST00000360228 IGHV3-15A0A0B4J1V0 119 aa15.7■□□□□ 0.1
CACNA1A-201ENST00000360228 DGCR2P98153 550 aa15.7■□□□□ 0.1
CACNA1A-201ENST00000360228 DHODHQ02127 395 aa15.7■□□□□ 0.1
CACNA1A-201ENST00000360228 NXPE3Q969Y0 559 aa15.7■□□□□ 0.1
CACNA1A-201ENST00000360228 Q96M85 177 aa15.7■□□□□ 0.1
CACNA1A-201ENST00000360228 SEBOXQ9HB31 216 aaPredicted RBP15.7■□□□□ 0.1
CACNA1A-201ENST00000360228 ELOA3CA0A087WX78 387 aaPredicted RBP15.7■□□□□ 0.1
CACNA1A-201ENST00000360228 TMEM81Q6P7N7 255 aa15.7■□□□□ 0.1
CACNA1A-201ENST00000360228 SLC26A10Q8NG04 563 aa15.7■□□□□ 0.1
CACNA1A-201ENST00000360228 C20orf141Q9NUB4 165 aa15.7■□□□□ 0.1
CACNA1A-201ENST00000360228 ST3GAL6Q9Y274 331 aa15.7■□□□□ 0.1
CACNA1A-201ENST00000360228 TOMM34Q15785 309 aaPredicted RBP15.7■□□□□ 0.1
CACNA1A-201ENST00000360228 OTUD1Q5VV17 481 aaPredicted RBP15.7■□□□□ 0.1
CACNA1A-201ENST00000360228 IL17CQ9P0M4 197 aa15.69■□□□□ 0.1
CACNA1A-201ENST00000360228 H7C2G1 150 aa15.69■□□□□ 0.1
CACNA1A-201ENST00000360228 HIST1H1CP16403 213 aaKnown RBP15.69■□□□□ 0.1
CACNA1A-201ENST00000360228 OR1C1Q15619 314 aa15.69■□□□□ 0.1
CACNA1A-201ENST00000360228 LIN28BQ6ZN17 250 aaKnown RBP eCLIP15.69■□□□□ 0.1
CACNA1A-201ENST00000360228 MARCH1Q8TCQ1 289 aa15.69■□□□□ 0.1
CACNA1A-201ENST00000360228 TMEM140Q9NV12 185 aa15.69■□□□□ 0.1
CACNA1A-201ENST00000360228 TIMP1P01033 207 aa15.69■□□□□ 0.1
CACNA1A-201ENST00000360228 OR1N2Q8NGR9 330 aa15.69■□□□□ 0.1
CACNA1A-201ENST00000360228 FGF13Q92913 245 aa15.69■□□□□ 0.1
CACNA1A-201ENST00000360228 TMEM9BQ9NQ34 198 aa15.69■□□□□ 0.1
CACNA1A-201ENST00000360228 SP1P08047 785 aa15.69■□□□□ 0.1
CACNA1A-201ENST00000360228 ZNF260Q3ZCT1 412 aa15.69■□□□□ 0.1
CACNA1A-201ENST00000360228 OR1B1Q8NGR6 318 aa15.69■□□□□ 0.1
CACNA1A-201ENST00000360228 TNFRSF19Q9NS68 423 aa15.69■□□□□ 0.1
CACNA1A-201ENST00000360228 PHF3Q92576 2039 aaKnown RBP15.69■□□□□ 0.1
CACNA1A-201ENST00000360228 CTSAP10619 480 aa15.69■□□□□ 0.1
CACNA1A-201ENST00000360228 HSF5Q4G112 596 aaPredicted RBP15.69■□□□□ 0.1
CACNA1A-201ENST00000360228 SLCO4A1Q96BD0 722 aa15.69■□□□□ 0.1
CACNA1A-201ENST00000360228 PROCRQ9UNN8 238 aa15.69■□□□□ 0.1
CACNA1A-201ENST00000360228 A0A1B0GUH1 482 aa15.69■□□□□ 0.1
CACNA1A-201ENST00000360228 CST7O76096 145 aa15.69■□□□□ 0.1
CACNA1A-201ENST00000360228 PPIAP62937 165 aaKnown RBP15.69■□□□□ 0.1
CACNA1A-201ENST00000360228 CLDN23Q96B33 292 aa15.69■□□□□ 0.1
CACNA1A-201ENST00000360228 SPAG8Q99932 426 aaPredicted RBP15.69■□□□□ 0.1
CACNA1A-201ENST00000360228 RPL30P62888 115 aaKnown RBP15.69■□□□□ 0.1
CACNA1A-201ENST00000360228 OR52N4Q8NGI2 321 aa15.69■□□□□ 0.1
CACNA1A-201ENST00000360228 ATP5SQ99766 215 aa15.69■□□□□ 0.1
CACNA1A-201ENST00000360228 KNDC1Q76NI1 1749 aa15.68■□□□□ 0.1
CACNA1A-201ENST00000360228 GABRB1P18505 474 aa15.68■□□□□ 0.1
CACNA1A-201ENST00000360228 C7orf72A4D263 438 aa15.68■□□□□ 0.1
CACNA1A-201ENST00000360228 IL2RAP01589 272 aa15.68■□□□□ 0.1
CACNA1A-201ENST00000360228 Q6ZNX1 250 aa15.68■□□□□ 0.1
CACNA1A-201ENST00000360228 ZIC5Q96T25 663 aa15.68■□□□□ 0.1
CACNA1A-201ENST00000360228 CXorf36Q9H7Y0 433 aa15.68■□□□□ 0.1
CACNA1A-201ENST00000360228 SLC25A22Q9H936 323 aa15.68■□□□□ 0.1
CACNA1A-201ENST00000360228 MRC1P22897 1456 aa15.68■□□□□ 0.1
CACNA1A-201ENST00000360228 A0A1B0GX78 115 aa15.68■□□□□ 0.1
CACNA1A-201ENST00000360228 LYG2Q86SG7 212 aa15.68■□□□□ 0.1
CACNA1A-201ENST00000360228 OR52B4Q8NGK2 314 aa15.68■□□□□ 0.1
CACNA1A-201ENST00000360228 FAM174AQ8TBP5 190 aa15.68■□□□□ 0.1
CACNA1A-201ENST00000360228 IL21Q9HBE4 155 aa15.68■□□□□ 0.1
CACNA1A-201ENST00000360228 MARCH5Q9NX47 278 aa15.68■□□□□ 0.1
CACNA1A-201ENST00000360228 BCL3P20749 454 aa15.68■□□□□ 0.1
CACNA1A-201ENST00000360228 GNG10P50151 68 aa15.68■□□□□ 0.1
CACNA1A-201ENST00000360228 ZNF750Q32MQ0 723 aa15.68■□□□□ 0.1
CACNA1A-201ENST00000360228 PRDM7Q9NQW5 492 aa15.68■□□□□ 0.1
CACNA1A-201ENST00000360228 OR2A25A4D2G3 310 aa15.68■□□□□ 0.1
CACNA1A-201ENST00000360228 TLCD2A6NGC4 264 aa15.68■□□□□ 0.1
CACNA1A-201ENST00000360228 OR1N1Q8NGS0 311 aa15.68■□□□□ 0.1
CACNA1A-201ENST00000360228 C4AP0C0L4 1744 aa15.68■□□□□ 0.1
CACNA1A-201ENST00000360228 C4BP0C0L5 1744 aa15.68■□□□□ 0.1
CACNA1A-201ENST00000360228 C1SP09871 688 aa15.68■□□□□ 0.1
CACNA1A-201ENST00000360228 EGR3Q06889 387 aa15.68■□□□□ 0.1
CACNA1A-201ENST00000360228 ABI3BPQ7Z7G0 1075 aa15.68■□□□□ 0.1
CACNA1A-201ENST00000360228 LAMB2P55268 1798 aa15.68■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 78.4 ms