RNA–Protein interactions for RNA: ENST00000358901.10

VCP-201, Transcript of valosin containing protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VCP, Length 4,370 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCP-201ENST00000358901 HYAL1Q12794 435 aa12.28□□□□□ -0.44
VCP-201ENST00000358901 OR8G1Q15617 311 aa12.28□□□□□ -0.44
VCP-201ENST00000358901 CLEC12BQ2HXU8 276 aa12.28□□□□□ -0.44
VCP-201ENST00000358901 C20orf196Q8IYI0 205 aa12.28□□□□□ -0.44
VCP-201ENST00000358901 UQCC2Q9BRT2 126 aa12.28□□□□□ -0.44
VCP-201ENST00000358901 OSGIN2Q9Y236 505 aa12.28□□□□□ -0.44
VCP-201ENST00000358901 ZNF816-ZNF321PA0A0X1KG74 233 aa12.27□□□□□ -0.44
VCP-201ENST00000358901 ENSAO43768 121 aaKnown RBP12.27□□□□□ -0.44
VCP-201ENST00000358901 GCM2O75603 506 aaPredicted RBP12.27□□□□□ -0.44
VCP-201ENST00000358901 MPC2O95563 127 aa12.27□□□□□ -0.44
VCP-201ENST00000358901 THBS4P35443 961 aa12.27□□□□□ -0.44
VCP-201ENST00000358901 INSM1Q01101 510 aaPredicted RBP12.27□□□□□ -0.44
VCP-201ENST00000358901 MESP2Q0VG99 397 aa12.27□□□□□ -0.44
VCP-201ENST00000358901 ZNF573Q86YE8 665 aa12.27□□□□□ -0.44
VCP-201ENST00000358901 ZNF321PQ8N8H1 164 aa12.27□□□□□ -0.44
VCP-201ENST00000358901 OR5M8Q8NGP6 311 aa12.27□□□□□ -0.44
VCP-201ENST00000358901 OR10AC1Q8NH08 325 aa12.27□□□□□ -0.44
VCP-201ENST00000358901 HGDQ93099 445 aa12.27□□□□□ -0.44
VCP-201ENST00000358901 ZC3HAV1LQ96H79 300 aaKnown RBP12.27□□□□□ -0.44
VCP-201ENST00000358901 BTF3L4Q96K17 158 aa12.27□□□□□ -0.44
VCP-201ENST00000358901 CCDC74BQ96LY2 380 aa12.27□□□□□ -0.44
VCP-201ENST00000358901 VSTM2LQ96N03 204 aa12.27□□□□□ -0.44
VCP-201ENST00000358901 OPA3Q9H6K4 179 aa12.27□□□□□ -0.44
VCP-201ENST00000358901 FRRS1LQ9P0K9 344 aa12.27□□□□□ -0.44
VCP-201ENST00000358901 TRIOBPQ9H2D6 2365 aa12.27□□□□□ -0.45
VCP-201ENST00000358901 COL24A1Q17RW2 1714 aa12.27□□□□□ -0.45
VCP-201ENST00000358901 CENPVL1A0A0U1RR11 272 aa12.27□□□□□ -0.45
VCP-201ENST00000358901 RNASEK-C17orf49H0YIS7 233 aa12.27□□□□□ -0.45
VCP-201ENST00000358901 SLC37A1P57057 533 aa12.27□□□□□ -0.45
VCP-201ENST00000358901 SCAND1P57086 179 aa12.27□□□□□ -0.45
VCP-201ENST00000358901 C4orf17Q53FE4 359 aa12.27□□□□□ -0.45
VCP-201ENST00000358901 C9orf62Q8N4C0 152 aa12.27□□□□□ -0.45
VCP-201ENST00000358901 OR11H7Q8NGC8 314 aa12.27□□□□□ -0.45
VCP-201ENST00000358901 PPP1R3EQ9H7J1 279 aa12.27□□□□□ -0.45
VCP-201ENST00000358901 CNTD2Q9H8S5 307 aa12.27□□□□□ -0.45
VCP-201ENST00000358901 ZNF275Q9NSD4 429 aaPredicted RBP12.27□□□□□ -0.45
VCP-201ENST00000358901 DOCK3Q8IZD9 2030 aa12.27□□□□□ -0.45
VCP-201ENST00000358901 TO15178 435 aa12.27□□□□□ -0.45
VCP-201ENST00000358901 FAM157BP0CG42 384 aa12.27□□□□□ -0.45
VCP-201ENST00000358901 RD3LP0DJH9 198 aa12.27□□□□□ -0.45
VCP-201ENST00000358901 GLULP15104 373 aa12.27□□□□□ -0.45
VCP-201ENST00000358901 RAB32Q13637 225 aa12.27□□□□□ -0.45
VCP-201ENST00000358901 LSRQ86X29 649 aaPredicted RBP12.27□□□□□ -0.45
VCP-201ENST00000358901 SLC35G3Q8N808 338 aa12.27□□□□□ -0.45
VCP-201ENST00000358901 ZNF439Q8NDP4 499 aa12.27□□□□□ -0.45
VCP-201ENST00000358901 PAPPA2Q9BXP8 1791 aa12.27□□□□□ -0.45
VCP-201ENST00000358901 PDGFBP01127 241 aaPredicted RBP12.26□□□□□ -0.45
VCP-201ENST00000358901 PTGFRP43088 359 aa12.26□□□□□ -0.45
VCP-201ENST00000358901 GPR3P46089 330 aa12.26□□□□□ -0.45
VCP-201ENST00000358901 CSRP3P50461 194 aa12.26□□□□□ -0.45
VCP-201ENST00000358901 OR8B8Q15620 311 aa12.26□□□□□ -0.45
VCP-201ENST00000358901 FAM109BQ6ICB4 259 aaPredicted RBP12.26□□□□□ -0.45
VCP-201ENST00000358901 FAM199XQ6PEV8 388 aaPredicted RBP12.26□□□□□ -0.45
VCP-201ENST00000358901 ABI3BPQ7Z7G0 1075 aa12.26□□□□□ -0.45
VCP-201ENST00000358901 SPEM1Q8N4L4 309 aa12.26□□□□□ -0.45
VCP-201ENST00000358901 NECAP1Q8NC96 275 aa12.26□□□□□ -0.45
VCP-201ENST00000358901 OR1J1Q8NGS3 322 aa12.26□□□□□ -0.45
VCP-201ENST00000358901 LRRC3BQ96PB8 259 aa12.26□□□□□ -0.45
VCP-201ENST00000358901 C9orf170A2RU37 121 aa12.26□□□□□ -0.45
VCP-201ENST00000358901 GP1BAP07359 652 aa12.26□□□□□ -0.45
VCP-201ENST00000358901 FPR2P25090 351 aa12.26□□□□□ -0.45
VCP-201ENST00000358901 ZDHHC23Q8IYP9 409 aa12.26□□□□□ -0.45
VCP-201ENST00000358901 FOXB1Q99853 325 aa12.26□□□□□ -0.45
VCP-201ENST00000358901 CABLES2Q9BTV7 478 aa12.26□□□□□ -0.45
VCP-201ENST00000358901 NDRG3Q9UGV2 375 aa12.26□□□□□ -0.45
VCP-201ENST00000358901 OR4C45A6NMZ5 311 aa12.26□□□□□ -0.45
VCP-201ENST00000358901 OR8U8P0C7N1 319 aa12.26□□□□□ -0.45
VCP-201ENST00000358901 SULT1A3P0DMM9 295 aa12.26□□□□□ -0.45
VCP-201ENST00000358901 SULT1A4P0DMN0 295 aa12.26□□□□□ -0.45
VCP-201ENST00000358901 FUT3P21217 361 aa12.26□□□□□ -0.45
VCP-201ENST00000358901 SEZ6L2Q6UXD5 910 aa12.26□□□□□ -0.45
VCP-201ENST00000358901 LSMEM1Q8N8F7 131 aa12.26□□□□□ -0.45
VCP-201ENST00000358901 BPIFCQ8NFQ6 507 aa12.26□□□□□ -0.45
VCP-201ENST00000358901 ADAM19Q9H013 955 aa12.26□□□□□ -0.45
VCP-201ENST00000358901 NTMQ9P121 344 aa12.26□□□□□ -0.45
VCP-201ENST00000358901 SIRT4Q9Y6E7 314 aaPredicted RBP12.26□□□□□ -0.45
VCP-201ENST00000358901 IGHV1OR21-1A0A087WYE8 117 aa12.25□□□□□ -0.45
VCP-201ENST00000358901 ADAP1O75689 374 aa12.25□□□□□ -0.45
VCP-201ENST00000358901 MGST1P10620 155 aaKnown RBP12.25□□□□□ -0.45
VCP-201ENST00000358901 ASCL1P50553 236 aa12.25□□□□□ -0.45
VCP-201ENST00000358901 SLC10A1Q14973 349 aa12.25□□□□□ -0.45
VCP-201ENST00000358901 MPPED2Q15777 294 aa12.25□□□□□ -0.45
VCP-201ENST00000358901 VASH2Q86V25 355 aa12.25□□□□□ -0.45
VCP-201ENST00000358901 C15orf54Q8N8G6 183 aa12.25□□□□□ -0.45
VCP-201ENST00000358901 OR10P1Q8NGE3 313 aa12.25□□□□□ -0.45
VCP-201ENST00000358901 SPSB1Q96BD6 273 aa12.25□□□□□ -0.45
VCP-201ENST00000358901 RNF150Q9ULK6 438 aa12.25□□□□□ -0.45
VCP-201ENST00000358901 TRAV8-7A0A075B6U6 113 aa12.25□□□□□ -0.45
VCP-201ENST00000358901 SH2D1BO14796 132 aa12.25□□□□□ -0.45
VCP-201ENST00000358901 AGFG1P52594 562 aaKnown RBP12.25□□□□□ -0.45
VCP-201ENST00000358901 PJVKQ0ZLH3 352 aa12.25□□□□□ -0.45
VCP-201ENST00000358901 MESTQ5EB52 335 aa12.25□□□□□ -0.45
VCP-201ENST00000358901 ZNF787Q6DD87 383 aa12.25□□□□□ -0.45
VCP-201ENST00000358901 C6orf201Q7Z4U5 140 aa12.25□□□□□ -0.45
VCP-201ENST00000358901 GCNT2Q8N0V5 402 aa12.25□□□□□ -0.45
VCP-201ENST00000358901 ZNF561Q8N587 486 aa12.25□□□□□ -0.45
VCP-201ENST00000358901 RBMXL3Q8N7X1 1067 aaKnown RBP12.25□□□□□ -0.45
VCP-201ENST00000358901 UBALD1Q8TB05 177 aa12.25□□□□□ -0.45
VCP-201ENST00000358901 ZNF75AQ96N20 296 aa12.25□□□□□ -0.45
VCP-201ENST00000358901 UBR3Q6ZT12 1888 aa12.25□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms