RNA–Protein interactions for RNA: ENST00000358544.6

VPS13B-203, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene VPS13B, Length 14,094 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-203ENST00000358544 SNAI1O95863 264 aaPredicted RBP5.48□□□□□ -1.53
VPS13B-203ENST00000358544 CTXN2P0C2S0 81 aa5.48□□□□□ -1.53
VPS13B-203ENST00000358544 CTSAP10619 480 aa5.48□□□□□ -1.53
VPS13B-203ENST00000358544 ACAA2P42765 397 aaKnown RBP5.48□□□□□ -1.53
VPS13B-203ENST00000358544 KIR2DS4P43632 304 aa5.48□□□□□ -1.53
VPS13B-203ENST00000358544 KIR2DS1Q14954 304 aa5.48□□□□□ -1.53
VPS13B-203ENST00000358544 NHLRC2Q8NBF2 726 aa5.48□□□□□ -1.53
VPS13B-203ENST00000358544 GNG12Q9UBI6 72 aa5.48□□□□□ -1.53
VPS13B-203ENST00000358544 C19orf25Q9UFG5 118 aaPredicted RBP5.48□□□□□ -1.53
VPS13B-203ENST00000358544 Q9Y3F1 56 aa5.48□□□□□ -1.53
VPS13B-203ENST00000358544 IGLV3-10A0A075B6K4 115 aa5.48□□□□□ -1.53
VPS13B-203ENST00000358544 BCL2P10415 239 aa5.48□□□□□ -1.53
VPS13B-203ENST00000358544 FGF8P55075 233 aaPredicted RBP5.48□□□□□ -1.53
VPS13B-203ENST00000358544 PHF19Q5T6S3 580 aa5.48□□□□□ -1.53
VPS13B-203ENST00000358544 SPACA5Q96QH8 159 aa5.48□□□□□ -1.53
VPS13B-203ENST00000358544 SIGLEC11Q96RL6 698 aa5.48□□□□□ -1.53
VPS13B-203ENST00000358544 DNMT3BQ9UBC3 853 aaKnown RBP5.48□□□□□ -1.53
VPS13B-203ENST00000358544 RGPD2P0DJD1 1756 aa5.48□□□□□ -1.53
VPS13B-203ENST00000358544 AQP7P3A6NL99 342 aa5.48□□□□□ -1.53
VPS13B-203ENST00000358544 GSTP1P09211 210 aaKnown RBP5.48□□□□□ -1.53
VPS13B-203ENST00000358544 PIGPP57054 158 aa5.48□□□□□ -1.53
VPS13B-203ENST00000358544 RFLNAQ6ZTI6 216 aa5.48□□□□□ -1.53
VPS13B-203ENST00000358544 PLPP6Q8IY26 295 aa5.48□□□□□ -1.53
VPS13B-203ENST00000358544 OR1P1Q8NH06 330 aa5.48□□□□□ -1.53
VPS13B-203ENST00000358544 RAB40CQ96S21 281 aa5.48□□□□□ -1.53
VPS13B-203ENST00000358544 CDH20Q9HBT6 801 aa5.48□□□□□ -1.53
VPS13B-203ENST00000358544 KCNE5Q9UJ90 142 aa5.48□□□□□ -1.53
VPS13B-203ENST00000358544 TMED3Q9Y3Q3 217 aa5.48□□□□□ -1.53
VPS13B-203ENST00000358544 LDB3O75112 727 aa5.48□□□□□ -1.53
VPS13B-203ENST00000358544 NDUFS6O75380 124 aaKnown RBP5.48□□□□□ -1.53
VPS13B-203ENST00000358544 AKR7A3O95154 331 aa5.48□□□□□ -1.53
VPS13B-203ENST00000358544 IL33O95760 270 aa5.48□□□□□ -1.53
VPS13B-203ENST00000358544 ZNF154Q13106 437 aa5.48□□□□□ -1.53
VPS13B-203ENST00000358544 ELAVL3Q14576 367 aaKnown RBP5.48□□□□□ -1.53
VPS13B-203ENST00000358544 USP50Q70EL3 339 aaPredicted RBP5.48□□□□□ -1.53
VPS13B-203ENST00000358544 PRR18Q8N4B5 295 aa5.48□□□□□ -1.53
VPS13B-203ENST00000358544 OIT3Q8WWZ8 545 aa5.48□□□□□ -1.53
VPS13B-203ENST00000358544 LAMB2P55268 1798 aa5.48□□□□□ -1.53
VPS13B-203ENST00000358544 DOCK5Q9H7D0 1870 aa5.48□□□□□ -1.53
VPS13B-203ENST00000358544 OR2M5A3KFT3 312 aa5.48□□□□□ -1.53
VPS13B-203ENST00000358544 TMPRSS11DO60235 418 aa5.48□□□□□ -1.53
VPS13B-203ENST00000358544 ICOSLGO75144 302 aa5.48□□□□□ -1.53
VPS13B-203ENST00000358544 ONECUT2O95948 504 aa5.48□□□□□ -1.53
VPS13B-203ENST00000358544 TMEM33P57088 247 aa5.48□□□□□ -1.53
VPS13B-203ENST00000358544 PAX5Q02548 391 aa5.48□□□□□ -1.53
VPS13B-203ENST00000358544 MZT1Q08AG7 82 aa5.48□□□□□ -1.53
VPS13B-203ENST00000358544 RAB32Q13637 225 aa5.48□□□□□ -1.53
VPS13B-203ENST00000358544 FZD2Q14332 565 aa5.48□□□□□ -1.53
VPS13B-203ENST00000358544 SLC16A14Q7RTX9 510 aa5.48□□□□□ -1.53
VPS13B-203ENST00000358544 MKXQ8IYA7 352 aa5.48□□□□□ -1.53
VPS13B-203ENST00000358544 KLHDC9Q8NEP7 349 aa5.48□□□□□ -1.53
VPS13B-203ENST00000358544 ATP5SQ99766 215 aa5.48□□□□□ -1.53
VPS13B-203ENST00000358544 DHCR7Q9UBM7 475 aaKnown RBP5.48□□□□□ -1.53
VPS13B-203ENST00000358544 PAM16Q9Y3D7 125 aa5.48□□□□□ -1.53
VPS13B-203ENST00000358544 CST7O76096 145 aa5.48□□□□□ -1.53
VPS13B-203ENST00000358544 OR2A4O95047 310 aa5.48□□□□□ -1.53
VPS13B-203ENST00000358544 TNFP01375 233 aa5.48□□□□□ -1.53
VPS13B-203ENST00000358544 IGHA1P01876 353 aa5.48□□□□□ -1.53
VPS13B-203ENST00000358544 MBPP02686 304 aaPredicted RBP5.48□□□□□ -1.53
VPS13B-203ENST00000358544 FCER1GP30273 86 aa5.48□□□□□ -1.53
VPS13B-203ENST00000358544 PMP22Q01453 160 aa5.48□□□□□ -1.53
VPS13B-203ENST00000358544 RPEL1Q2QD12 228 aa5.48□□□□□ -1.53
VPS13B-203ENST00000358544 OR4A4PQ8NGN8 299 aa5.48□□□□□ -1.53
VPS13B-203ENST00000358544 DPF1Q92782 380 aa5.48□□□□□ -1.53
VPS13B-203ENST00000358544 IRF7Q92985 503 aa5.48□□□□□ -1.53
VPS13B-203ENST00000358544 OR2A7Q96R45 310 aa5.48□□□□□ -1.53
VPS13B-203ENST00000358544 TMEM191AQ9H0A3 160 aa5.48□□□□□ -1.53
VPS13B-203ENST00000358544 TLNRD1Q9H1K6 362 aa5.48□□□□□ -1.53
VPS13B-203ENST00000358544 FOXJ2Q9P0K8 574 aa5.48□□□□□ -1.53
VPS13B-203ENST00000358544 OR1A1Q9P1Q5 309 aa5.48□□□□□ -1.53
VPS13B-203ENST00000358544 ACAD8Q9UKU7 415 aa5.48□□□□□ -1.53
VPS13B-203ENST00000358544 VSIG4Q9Y279 399 aa5.48□□□□□ -1.53
VPS13B-203ENST00000358544 MBLAC1A4D2B0 266 aaPredicted RBP5.48□□□□□ -1.53
VPS13B-203ENST00000358544 RRP8O43159 456 aaKnown RBP5.48□□□□□ -1.53
VPS13B-203ENST00000358544 GAPDHP04406 335 aaKnown RBP5.48□□□□□ -1.53
VPS13B-203ENST00000358544 GRB2P62993 217 aaKnown RBP5.48□□□□□ -1.53
VPS13B-203ENST00000358544 CIB3Q96Q77 187 aaPredicted RBP5.48□□□□□ -1.53
VPS13B-203ENST00000358544 GSX1Q9H4S2 264 aaPredicted RBP5.48□□□□□ -1.53
VPS13B-203ENST00000358544 B4E171 279 aa5.48□□□□□ -1.53
VPS13B-203ENST00000358544 C1SP09871 688 aa5.48□□□□□ -1.53
VPS13B-203ENST00000358544 GLI4P10075 376 aa5.48□□□□□ -1.53
VPS13B-203ENST00000358544 ARSJQ5FYB0 599 aaPredicted RBP5.48□□□□□ -1.53
VPS13B-203ENST00000358544 ABHD17CQ6PCB6 329 aa5.48□□□□□ -1.53
VPS13B-203ENST00000358544 FA2HQ7L5A8 372 aa5.48□□□□□ -1.53
VPS13B-203ENST00000358544 TMEM156Q8N614 296 aa5.48□□□□□ -1.53
VPS13B-203ENST00000358544 OR11G2Q8NGC1 345 aa5.48□□□□□ -1.53
VPS13B-203ENST00000358544 THAP3Q8WTV1 239 aaPredicted RBP5.48□□□□□ -1.53
VPS13B-203ENST00000358544 UQCR10Q9UDW1 63 aa5.48□□□□□ -1.53
VPS13B-203ENST00000358544 C5P01031 1676 aa5.48□□□□□ -1.53
VPS13B-203ENST00000358544 MAST2Q6P0Q8 1798 aa5.48□□□□□ -1.53
VPS13B-203ENST00000358544 TICRRQ7Z2Z1 1910 aa5.48□□□□□ -1.53
VPS13B-203ENST00000358544 GJE1A6NN92 205 aa5.48□□□□□ -1.53
VPS13B-203ENST00000358544 H0YGG7 62 aa5.48□□□□□ -1.53
VPS13B-203ENST00000358544 GALR3O60755 368 aaPredicted RBP5.48□□□□□ -1.53
VPS13B-203ENST00000358544 RPL27P61353 136 aaKnown RBP5.48□□□□□ -1.53
VPS13B-203ENST00000358544 HLA-BQ31612 363 aa5.48□□□□□ -1.53
VPS13B-203ENST00000358544 ALKAL1Q6UXT8 129 aa5.48□□□□□ -1.53
VPS13B-203ENST00000358544 PAQR9Q6ZVX9 377 aa5.48□□□□□ -1.53
VPS13B-203ENST00000358544 SMDT1Q9H4I9 107 aa5.48□□□□□ -1.53
VPS13B-203ENST00000358544 CHST11Q9NPF2 352 aa5.48□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 47.9 ms