RNA–Protein interactions for RNA: ENST00000357604.9

UPF2-202, Transcript of UPF2, regulator of nonsense mediated mRNA decay, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UPF2, Length 5,193 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF2-202ENST00000357604 GPA33Q99795 319 aa7.93□□□□□ -1.14
UPF2-202ENST00000357604 UQCC2Q9BRT2 126 aa7.93□□□□□ -1.14
UPF2-202ENST00000357604 PKIBQ9C010 78 aa7.93□□□□□ -1.14
UPF2-202ENST00000357604 LGALS8O00214 317 aa7.93□□□□□ -1.14
UPF2-202ENST00000357604 P2RY4P51582 365 aa7.93□□□□□ -1.14
UPF2-202ENST00000357604 MXD1Q05195 221 aa7.93□□□□□ -1.14
UPF2-202ENST00000357604 METTL11BQ5VVY1 283 aa7.93□□□□□ -1.14
UPF2-202ENST00000357604 FAM90A1Q86YD7 464 aa7.93□□□□□ -1.14
UPF2-202ENST00000357604 ZNF701Q9NV72 531 aaPredicted RBP7.93□□□□□ -1.14
UPF2-202ENST00000357604 MRPS18AQ9NVS2 196 aaKnown RBP7.93□□□□□ -1.14
UPF2-202ENST00000357604 ING1Q9UK53 422 aaPredicted RBP7.93□□□□□ -1.14
UPF2-202ENST00000357604 TRDV1A0A1B0GX56 115 aa7.93□□□□□ -1.14
UPF2-202ENST00000357604 CST4P01036 141 aa7.93□□□□□ -1.14
UPF2-202ENST00000357604 IGHA1P01876 353 aa7.93□□□□□ -1.14
UPF2-202ENST00000357604 ZNF182P17025 639 aaPredicted RBP7.93□□□□□ -1.14
UPF2-202ENST00000357604 TMEM33P57088 247 aa7.93□□□□□ -1.14
UPF2-202ENST00000357604 SLC22A6Q4U2R8 563 aa7.93□□□□□ -1.14
UPF2-202ENST00000357604 WDR38Q5JTN6 314 aa7.93□□□□□ -1.14
UPF2-202ENST00000357604 UBE2NLQ5JXB2 153 aa7.93□□□□□ -1.14
UPF2-202ENST00000357604 C22orf42Q6IC83 251 aa7.93□□□□□ -1.14
UPF2-202ENST00000357604 GLIPR1L1Q6UWM5 242 aa7.93□□□□□ -1.14
UPF2-202ENST00000357604 DEFB108BQ8NET1 73 aa7.93□□□□□ -1.14
UPF2-202ENST00000357604 OR2AE1Q8NHA4 323 aa7.93□□□□□ -1.14
UPF2-202ENST00000357604 MS4A3Q96HJ5 214 aa7.93□□□□□ -1.14
UPF2-202ENST00000357604 NPAS1Q99742 590 aa7.93□□□□□ -1.14
UPF2-202ENST00000357604 HEXA-AS1Q9H8Q6 139 aa7.93□□□□□ -1.14
UPF2-202ENST00000357604 ZNF286AQ9HBT8 521 aa7.93□□□□□ -1.14
UPF2-202ENST00000357604 HMG20AQ9NP66 347 aa7.93□□□□□ -1.14
UPF2-202ENST00000357604 ZNF275Q9NSD4 429 aaPredicted RBP7.93□□□□□ -1.14
UPF2-202ENST00000357604 ING3Q9NXR8 418 aa7.93□□□□□ -1.14
UPF2-202ENST00000357604 CLN8Q9UBY8 286 aa7.93□□□□□ -1.14
UPF2-202ENST00000357604 MRM2Q9UI43 246 aaKnown RBP7.93□□□□□ -1.14
UPF2-202ENST00000357604 GPR37O15354 613 aa7.92□□□□□ -1.14
UPF2-202ENST00000357604 KITLGP21583 273 aa7.92□□□□□ -1.14
UPF2-202ENST00000357604 IL2RGP31785 369 aa7.92□□□□□ -1.14
UPF2-202ENST00000357604 KCNJ3P48549 501 aa7.92□□□□□ -1.14
UPF2-202ENST00000357604 TMBIM6P55061 237 aa7.92□□□□□ -1.14
UPF2-202ENST00000357604 TSPAN5P62079 268 aa7.92□□□□□ -1.14
UPF2-202ENST00000357604 FAM131AQ6UXB0 335 aa7.92□□□□□ -1.14
UPF2-202ENST00000357604 FAM58AQ8N1B3 248 aa7.92□□□□□ -1.14
UPF2-202ENST00000357604 OSR2Q8N2R0 312 aa7.92□□□□□ -1.14
UPF2-202ENST00000357604 NEIL1Q96FI4 390 aaPredicted RBP7.92□□□□□ -1.14
UPF2-202ENST00000357604 NARFLQ9H6Q4 476 aa7.92□□□□□ -1.14
UPF2-202ENST00000357604 MRPS7Q9Y2R9 242 aaKnown RBP7.92□□□□□ -1.14
UPF2-202ENST00000357604 TMEM30CPA0ZSE6 113 aa7.92□□□□□ -1.14
UPF2-202ENST00000357604 RNF212BA8MTL3 300 aa7.92□□□□□ -1.14
UPF2-202ENST00000357604 CYB5BO43169 146 aa7.92□□□□□ -1.14
UPF2-202ENST00000357604 ENSAO43768 121 aaKnown RBP7.92□□□□□ -1.14
UPF2-202ENST00000357604 IGKV3-15P01624 115 aa7.92□□□□□ -1.14
UPF2-202ENST00000357604 GALP22466 123 aa7.92□□□□□ -1.14
UPF2-202ENST00000357604 DEFB113Q30KQ7 82 aa7.92□□□□□ -1.14
UPF2-202ENST00000357604 OR2G6Q5TZ20 316 aa7.92□□□□□ -1.14
UPF2-202ENST00000357604 ITLN1Q8WWA0 313 aa7.92□□□□□ -1.14
UPF2-202ENST00000357604 CABIN1Q9Y6J0 2220 aa7.92□□□□□ -1.14
UPF2-202ENST00000357604 A0A1W2PPK0 400 aa7.92□□□□□ -1.14
UPF2-202ENST00000357604 IGHV3-13P01766 116 aa7.92□□□□□ -1.14
UPF2-202ENST00000357604 ZNF14P17017 642 aaPredicted RBP7.92□□□□□ -1.14
UPF2-202ENST00000357604 SRMP19623 302 aa7.92□□□□□ -1.14
UPF2-202ENST00000357604 USF1P22415 310 aaPredicted RBP7.92□□□□□ -1.14
UPF2-202ENST00000357604 CEACAM3P40198 252 aa7.92□□□□□ -1.14
UPF2-202ENST00000357604 PRRX1P54821 245 aa7.92□□□□□ -1.14
UPF2-202ENST00000357604 IL13RA1P78552 427 aa7.92□□□□□ -1.14
UPF2-202ENST00000357604 BTN2A1Q7KYR7 527 aa7.92□□□□□ -1.14
UPF2-202ENST00000357604 NRG4Q8WWG1 115 aa7.92□□□□□ -1.14
UPF2-202ENST00000357604 POM121L2Q96KW2 1035 aa7.92□□□□□ -1.14
UPF2-202ENST00000357604 YAE1D1Q9NRH1 226 aa7.92□□□□□ -1.14
UPF2-202ENST00000357604 ETAA1Q9NY74 926 aa7.92□□□□□ -1.14
UPF2-202ENST00000357604 C14orf166Q9Y224 244 aaKnown RBP7.92□□□□□ -1.14
UPF2-202ENST00000357604 LOC100289279A0A1B0GTE1 492 aa7.92□□□□□ -1.14
UPF2-202ENST00000357604 PGAM2P15259 253 aa7.92□□□□□ -1.14
UPF2-202ENST00000357604 AMY2BP19961 511 aa7.92□□□□□ -1.14
UPF2-202ENST00000357604 ACSM1Q08AH1 577 aa7.92□□□□□ -1.14
UPF2-202ENST00000357604 Q5PR19 223 aa7.92□□□□□ -1.14
UPF2-202ENST00000357604 OLFML2AQ68BL7 652 aa7.92□□□□□ -1.14
UPF2-202ENST00000357604 SAXO1Q8IYX7 474 aa7.92□□□□□ -1.14
UPF2-202ENST00000357604 OR8H2Q8N162 312 aa7.92□□□□□ -1.14
UPF2-202ENST00000357604 BPIFB2Q8N4F0 458 aa7.92□□□□□ -1.14
UPF2-202ENST00000357604 OR10AD1Q8NGE0 317 aa7.92□□□□□ -1.14
UPF2-202ENST00000357604 MCFD2Q8NI22 146 aa7.92□□□□□ -1.14
UPF2-202ENST00000357604 ZNF420Q8TAQ5 688 aaPredicted RBP7.92□□□□□ -1.14
UPF2-202ENST00000357604 CHST5Q9GZS9 411 aa7.92□□□□□ -1.14
UPF2-202ENST00000357604 TMEM106BQ9NUM4 274 aa7.92□□□□□ -1.14
UPF2-202ENST00000357604 MRPL22Q9NWU5 206 aaKnown RBP7.92□□□□□ -1.14
UPF2-202ENST00000357604 B3GNT2Q9NY97 397 aa7.92□□□□□ -1.14
UPF2-202ENST00000357604 NLKQ9UBE8 527 aa7.92□□□□□ -1.14
UPF2-202ENST00000357604 DAPK2Q9UIK4 370 aa7.92□□□□□ -1.14
UPF2-202ENST00000357604 ZNF221Q9UK13 617 aa7.92□□□□□ -1.14
UPF2-202ENST00000357604 KLK2P20151 261 aa7.91□□□□□ -1.14
UPF2-202ENST00000357604 CDKN1AP38936 164 aa7.91□□□□□ -1.14
UPF2-202ENST00000357604 CRYBA2P53672 197 aa7.91□□□□□ -1.14
UPF2-202ENST00000357604 MRPS10P82664 201 aaKnown RBP7.91□□□□□ -1.14
UPF2-202ENST00000357604 MRPS11P82912 194 aaKnown RBP7.91□□□□□ -1.14
UPF2-202ENST00000357604 LSM11P83369 360 aaKnown RBP eCLIP7.91□□□□□ -1.14
UPF2-202ENST00000357604 ZNF85Q03923 595 aa7.91□□□□□ -1.14
UPF2-202ENST00000357604 P2RY14Q15391 338 aa7.91□□□□□ -1.14
UPF2-202ENST00000357604 ZNF584Q8IVC4 421 aa7.91□□□□□ -1.14
UPF2-202ENST00000357604 KCTD12Q96CX2 325 aaKnown RBP7.91□□□□□ -1.14
UPF2-202ENST00000357604 SIRPB1O00241 398 aa7.91□□□□□ -1.14
UPF2-202ENST00000357604 POLR2IP36954 125 aaKnown RBP7.91□□□□□ -1.14
UPF2-202ENST00000357604 RAB25P57735 213 aa7.91□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 47.4 ms