RNA–Protein interactions for RNA: ENST00000356352.6

UPF2-201, Transcript of UPF2, regulator of nonsense mediated mRNA decay, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UPF2, Length 5,569 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF2-201ENST00000356352 RPL7P18124 248 aaKnown RBP5.82□□□□□ -1.48
UPF2-201ENST00000356352 HTRA3P83110 453 aa5.82□□□□□ -1.48
UPF2-201ENST00000356352 PAX5Q02548 391 aa5.82□□□□□ -1.48
UPF2-201ENST00000356352 CST9Q5W186 159 aa5.82□□□□□ -1.48
UPF2-201ENST00000356352 PRR27Q6MZM9 219 aa5.82□□□□□ -1.48
UPF2-201ENST00000356352 OR11G2Q8NGC1 345 aa5.82□□□□□ -1.48
UPF2-201ENST00000356352 OTOSQ8NHW6 89 aa5.82□□□□□ -1.48
UPF2-201ENST00000356352 PTDSS2Q9BVG9 487 aa5.82□□□□□ -1.48
UPF2-201ENST00000356352 NIT2Q9NQR4 276 aa5.82□□□□□ -1.48
UPF2-201ENST00000356352 UQCC1Q9NVA1 299 aa5.82□□□□□ -1.48
UPF2-201ENST00000356352 ZNF716A6NP11 495 aa5.81□□□□□ -1.48
UPF2-201ENST00000356352 SPRY3O43610 288 aa5.81□□□□□ -1.48
UPF2-201ENST00000356352 GCSHP23434 173 aa5.81□□□□□ -1.48
UPF2-201ENST00000356352 GPNMBQ14956 572 aa5.81□□□□□ -1.48
UPF2-201ENST00000356352 OXA1LQ15070 435 aa5.81□□□□□ -1.48
UPF2-201ENST00000356352 SOWAHCQ53LP3 525 aaPredicted RBP5.81□□□□□ -1.48
UPF2-201ENST00000356352 OR13G1Q8NGZ3 307 aa5.81□□□□□ -1.48
UPF2-201ENST00000356352 SMIM4Q8WVI0 70 aa5.81□□□□□ -1.48
UPF2-201ENST00000356352 ADTRPQ96IZ2 230 aa5.81□□□□□ -1.48
UPF2-201ENST00000356352 OR8B4Q96RC9 309 aa5.81□□□□□ -1.48
UPF2-201ENST00000356352 PARP12Q9H0J9 701 aaKnown RBP5.81□□□□□ -1.48
UPF2-201ENST00000356352 RAB1BQ9H0U4 201 aa5.81□□□□□ -1.48
UPF2-201ENST00000356352 CA10Q9NS85 328 aa5.81□□□□□ -1.48
UPF2-201ENST00000356352 MYH7BA7E2Y1 1941 aa5.81□□□□□ -1.48
UPF2-201ENST00000356352 hADV38S2A0JD32 116 aa5.81□□□□□ -1.48
UPF2-201ENST00000356352 M0R1X1 148 aa5.81□□□□□ -1.48
UPF2-201ENST00000356352 SOX15O60248 233 aa5.81□□□□□ -1.48
UPF2-201ENST00000356352 MMP7P09237 267 aaPredicted RBP5.81□□□□□ -1.48
UPF2-201ENST00000356352 SCGB1C2P0DMR2 95 aa5.81□□□□□ -1.48
UPF2-201ENST00000356352 SRP14P37108 136 aaKnown RBP5.81□□□□□ -1.48
UPF2-201ENST00000356352 FOXC1Q12948 553 aa5.81□□□□□ -1.48
UPF2-201ENST00000356352 ATP6V1FQ16864 119 aa5.81□□□□□ -1.48
UPF2-201ENST00000356352 TMEM65Q6PI78 240 aa5.81□□□□□ -1.48
UPF2-201ENST00000356352 RIMKLAQ8IXN7 391 aa5.81□□□□□ -1.48
UPF2-201ENST00000356352 OR2Z1Q8NG97 314 aa5.81□□□□□ -1.48
UPF2-201ENST00000356352 MAFAQ8NHW3 353 aaPredicted RBP5.81□□□□□ -1.48
UPF2-201ENST00000356352 FBXO17Q96EF6 278 aa5.81□□□□□ -1.48
UPF2-201ENST00000356352 LYRM2Q9NU23 88 aaPredicted RBP5.81□□□□□ -1.48
UPF2-201ENST00000356352 ALG1L2C9J202 215 aa5.81□□□□□ -1.48
UPF2-201ENST00000356352 TBX19O60806 448 aa5.81□□□□□ -1.48
UPF2-201ENST00000356352 HOXC4P09017 264 aaPredicted RBP5.81□□□□□ -1.48
UPF2-201ENST00000356352 MPGP29372 298 aa5.81□□□□□ -1.48
UPF2-201ENST00000356352 RFC3P40938 356 aa5.81□□□□□ -1.48
UPF2-201ENST00000356352 FAM3AP98173 230 aa5.81□□□□□ -1.48
UPF2-201ENST00000356352 FABP5Q01469 135 aa5.81□□□□□ -1.48
UPF2-201ENST00000356352 RNF151Q2KHN1 245 aa5.81□□□□□ -1.48
UPF2-201ENST00000356352 HLA-BQ31612 363 aa5.81□□□□□ -1.48
UPF2-201ENST00000356352 TMEM108Q6UXF1 575 aa5.81□□□□□ -1.48
UPF2-201ENST00000356352 LRRTM1Q86UE6 522 aa5.81□□□□□ -1.48
UPF2-201ENST00000356352 RTN4RL1Q86UN2 441 aaPredicted RBP5.81□□□□□ -1.48
UPF2-201ENST00000356352 YIPF6Q96EC8 236 aa5.81□□□□□ -1.48
UPF2-201ENST00000356352 LRRC61Q9BV99 259 aa5.81□□□□□ -1.48
UPF2-201ENST00000356352 PECRQ9BY49 303 aa5.81□□□□□ -1.48
UPF2-201ENST00000356352 DUSP21Q9H596 190 aa5.81□□□□□ -1.48
UPF2-201ENST00000356352 CTNNBIP1Q9NSA3 81 aaPredicted RBP5.81□□□□□ -1.48
UPF2-201ENST00000356352 PPIL1Q9Y3C6 166 aa5.81□□□□□ -1.48
UPF2-201ENST00000356352 POMT1Q9Y6A1 747 aa5.81□□□□□ -1.48
UPF2-201ENST00000356352 TCHHQ07283 1943 aa5.81□□□□□ -1.48
UPF2-201ENST00000356352 LOC102723971A0A1B0GUV8 181 aa5.81□□□□□ -1.48
UPF2-201ENST00000356352 HSBP1O75506 76 aa5.81□□□□□ -1.48
UPF2-201ENST00000356352 GP1BAP07359 652 aa5.81□□□□□ -1.48
UPF2-201ENST00000356352 SSPNQ14714 243 aa5.81□□□□□ -1.48
UPF2-201ENST00000356352 VAMP3Q15836 100 aa5.81□□□□□ -1.48
UPF2-201ENST00000356352 PCNPQ8WW12 178 aaKnown RBP5.81□□□□□ -1.48
UPF2-201ENST00000356352 MAP6Q96JE9 813 aa5.81□□□□□ -1.48
UPF2-201ENST00000356352 DOK1Q99704 481 aa5.81□□□□□ -1.48
UPF2-201ENST00000356352 VPS25Q9BRG1 176 aa5.81□□□□□ -1.48
UPF2-201ENST00000356352 NUDT16L1Q9BRJ7 211 aaKnown RBP5.81□□□□□ -1.48
UPF2-201ENST00000356352 SARGQ9BW04 601 aa5.81□□□□□ -1.48
UPF2-201ENST00000356352 SLC22A13Q9Y226 551 aa5.81□□□□□ -1.48
UPF2-201ENST00000356352 C5P01031 1676 aa5.81□□□□□ -1.48
UPF2-201ENST00000356352 A0A1B0GVG6 124 aa5.8□□□□□ -1.48
UPF2-201ENST00000356352 OR2T8A6NH00 312 aa5.8□□□□□ -1.48
UPF2-201ENST00000356352 C2CD4DB7Z1M9 353 aa5.8□□□□□ -1.48
UPF2-201ENST00000356352 B4GALT3O60512 393 aa5.8□□□□□ -1.48
UPF2-201ENST00000356352 TXNDC12O95881 172 aa5.8□□□□□ -1.48
UPF2-201ENST00000356352 EPXP11678 715 aa5.8□□□□□ -1.48
UPF2-201ENST00000356352 NME1P15531 152 aaKnown RBP5.8□□□□□ -1.48
UPF2-201ENST00000356352 USF1P22415 310 aaPredicted RBP5.8□□□□□ -1.48
UPF2-201ENST00000356352 OPRK1P41145 380 aa5.8□□□□□ -1.48
UPF2-201ENST00000356352 MEOX1P50221 254 aa5.8□□□□□ -1.48
UPF2-201ENST00000356352 WDR73Q6P4I2 378 aa5.8□□□□□ -1.48
UPF2-201ENST00000356352 DEGS2Q6QHC5 323 aa5.8□□□□□ -1.48
UPF2-201ENST00000356352 VASH2Q86V25 355 aa5.8□□□□□ -1.48
UPF2-201ENST00000356352 MYPOPQ86VE0 399 aaPredicted RBP5.8□□□□□ -1.48
UPF2-201ENST00000356352 EIF4E3Q8N5X7 224 aaKnown RBP5.8□□□□□ -1.48
UPF2-201ENST00000356352 SLC25A37Q9NYZ2 338 aa5.8□□□□□ -1.48
UPF2-201ENST00000356352 LRP12Q9Y561 859 aa5.8□□□□□ -1.48
UPF2-201ENST00000356352 FAM221AA4D161 298 aa5.8□□□□□ -1.48
UPF2-201ENST00000356352 DNASE2O00115 360 aaPredicted RBP5.8□□□□□ -1.48
UPF2-201ENST00000356352 SPRY1O43609 319 aaPredicted RBP5.8□□□□□ -1.48
UPF2-201ENST00000356352 FCMRO60667 390 aa5.8□□□□□ -1.48
UPF2-201ENST00000356352 SCO1O75880 301 aa5.8□□□□□ -1.48
UPF2-201ENST00000356352 DHRS3O75911 302 aa5.8□□□□□ -1.48
UPF2-201ENST00000356352 NGFP01138 241 aa5.8□□□□□ -1.48
UPF2-201ENST00000356352 PRDX4Q13162 271 aa5.8□□□□□ -1.48
UPF2-201ENST00000356352 ACSM6Q6P461 480 aa5.8□□□□□ -1.48
UPF2-201ENST00000356352 SSX8Q7RTT4 187 aa5.8□□□□□ -1.48
UPF2-201ENST00000356352 OR6S1Q8NH40 331 aa5.8□□□□□ -1.48
UPF2-201ENST00000356352 PATE1Q8WXA2 126 aa5.8□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms