RNA–Protein interactions for RNA: ENST00000355480.9

COL18A1-202, Transcript of collagen type XVIII alpha 1 chain, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene COL18A1, Length 5,924 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL18A1-202ENST00000355480 ABI3BPQ7Z7G0 1075 aa16.16■□□□□ 0.18
COL18A1-202ENST00000355480 OR4D9Q8NGE8 314 aa16.16■□□□□ 0.18
COL18A1-202ENST00000355480 OR10Z1Q8NGY1 313 aa16.16■□□□□ 0.18
COL18A1-202ENST00000355480 SPSB1Q96BD6 273 aa16.16■□□□□ 0.18
COL18A1-202ENST00000355480 KIF13AQ9H1H9 1805 aa16.16■□□□□ 0.18
COL18A1-202ENST00000355480 DBX1A6NMT0 343 aa16.16■□□□□ 0.18
COL18A1-202ENST00000355480 SLC25A4P12235 298 aa16.16■□□□□ 0.18
COL18A1-202ENST00000355480 CA6P23280 308 aa16.16■□□□□ 0.18
COL18A1-202ENST00000355480 EPHA2P29317 976 aa16.16■□□□□ 0.18
COL18A1-202ENST00000355480 HTRA4P83105 476 aaPredicted RBP16.16■□□□□ 0.18
COL18A1-202ENST00000355480 FUT7Q11130 342 aa16.16■□□□□ 0.18
COL18A1-202ENST00000355480 RPUSD3Q6P087 351 aaKnown RBP16.16■□□□□ 0.18
COL18A1-202ENST00000355480 UBALD1Q8TB05 177 aa16.16■□□□□ 0.18
COL18A1-202ENST00000355480 CLDN23Q96B33 292 aa16.16■□□□□ 0.18
COL18A1-202ENST00000355480 RYDENQ9NUL5 291 aaKnown RBP16.16■□□□□ 0.18
COL18A1-202ENST00000355480 MTCH2Q9Y6C9 303 aa16.16■□□□□ 0.18
COL18A1-202ENST00000355480 EVPLQ92817 2033 aa16.16■□□□□ 0.18
COL18A1-202ENST00000355480 ZNF785A8K8V0 405 aa16.15■□□□□ 0.18
COL18A1-202ENST00000355480 GOSR1O95249 250 aa16.15■□□□□ 0.18
COL18A1-202ENST00000355480 ENDOGQ14249 297 aaKnown RBP16.15■□□□□ 0.18
COL18A1-202ENST00000355480 FAM27D1Q5T7N8 215 aa16.15■□□□□ 0.18
COL18A1-202ENST00000355480 GSX2Q9BZM3 304 aa16.15■□□□□ 0.18
COL18A1-202ENST00000355480 IL5P05113 134 aa16.15■□□□□ 0.18
COL18A1-202ENST00000355480 PDCD1Q15116 288 aa16.15■□□□□ 0.18
COL18A1-202ENST00000355480 OR52N4Q8NGI2 321 aa16.15■□□□□ 0.18
COL18A1-202ENST00000355480 CCL17Q92583 94 aa16.15■□□□□ 0.18
COL18A1-202ENST00000355480 NTN4Q9HB63 628 aa16.15■□□□□ 0.18
COL18A1-202ENST00000355480 IL9P15248 144 aa16.15■□□□□ 0.18
COL18A1-202ENST00000355480 NTF3P20783 257 aa16.15■□□□□ 0.18
COL18A1-202ENST00000355480 RCL1Q9Y2P8 373 aaKnown RBP16.15■□□□□ 0.18
COL18A1-202ENST00000355480 FXYD1O00168 92 aa16.15■□□□□ 0.18
COL18A1-202ENST00000355480 GPR31O00270 319 aa16.15■□□□□ 0.18
COL18A1-202ENST00000355480 RRASP10301 218 aa16.15■□□□□ 0.18
COL18A1-202ENST00000355480 OR4C16Q8NGL9 310 aa16.15■□□□□ 0.18
COL18A1-202ENST00000355480 OR10D3Q8NH80 312 aa16.15■□□□□ 0.18
COL18A1-202ENST00000355480 RPEQ96AT9 228 aa16.15■□□□□ 0.18
COL18A1-202ENST00000355480 ESRP2Q9H6T0 727 aaKnown RBP16.15■□□□□ 0.18
COL18A1-202ENST00000355480 ZNF629Q9UEG4 869 aaPredicted RBP16.15■□□□□ 0.18
COL18A1-202ENST00000355480 TRAV1-2A0A0B4J238 106 aa16.15■□□□□ 0.18
COL18A1-202ENST00000355480 YBX1P67809 324 aaKnown RBP16.15■□□□□ 0.18
COL18A1-202ENST00000355480 TFF2Q03403 129 aa16.15■□□□□ 0.18
COL18A1-202ENST00000355480 TMEM215Q68D42 235 aa16.15■□□□□ 0.18
COL18A1-202ENST00000355480 GALNT16Q8N428 558 aa16.15■□□□□ 0.18
COL18A1-202ENST00000355480 NUDT19A8MXV4 375 aa16.14■□□□□ 0.17
COL18A1-202ENST00000355480 H3BP45 60 aa16.14■□□□□ 0.17
COL18A1-202ENST00000355480 SLC17A2O00624 439 aa16.14■□□□□ 0.17
COL18A1-202ENST00000355480 FCER1GP30273 86 aa16.14■□□□□ 0.17
COL18A1-202ENST00000355480 RAE1P78406 368 aaKnown RBP16.14■□□□□ 0.17
COL18A1-202ENST00000355480 TMEM211Q6ICI0 200 aa16.14■□□□□ 0.17
COL18A1-202ENST00000355480 LINC01555Q8NAE3 123 aa16.14■□□□□ 0.17
COL18A1-202ENST00000355480 DTWD2Q8NBA8 298 aa16.14■□□□□ 0.17
COL18A1-202ENST00000355480 AKR1E2Q96JD6 320 aa16.14■□□□□ 0.17
COL18A1-202ENST00000355480 TMEM231Q9H6L2 316 aa16.14■□□□□ 0.17
COL18A1-202ENST00000355480 TMEM108Q6UXF1 575 aa16.14■□□□□ 0.17
COL18A1-202ENST00000355480 CADM3Q8N126 398 aa16.14■□□□□ 0.17
COL18A1-202ENST00000355480 OR13G1Q8NGZ3 307 aa16.14■□□□□ 0.17
COL18A1-202ENST00000355480 DYNC2LI1Q8TCX1 351 aa16.14■□□□□ 0.17
COL18A1-202ENST00000355480 ZNF707Q96C28 371 aaPredicted RBP16.14■□□□□ 0.17
COL18A1-202ENST00000355480 FSCN3Q9NQT6 498 aa16.14■□□□□ 0.17
COL18A1-202ENST00000355480 PPIL1Q9Y3C6 166 aa16.14■□□□□ 0.17
COL18A1-202ENST00000355480 TNFSF14O43557 240 aa16.14■□□□□ 0.17
COL18A1-202ENST00000355480 NGFP01138 241 aa16.14■□□□□ 0.17
COL18A1-202ENST00000355480 CELA2BP08218 269 aaPredicted RBP16.14■□□□□ 0.17
COL18A1-202ENST00000355480 CTGFP29279 349 aa16.14■□□□□ 0.17
COL18A1-202ENST00000355480 GUCA2AQ02747 115 aa16.14■□□□□ 0.17
COL18A1-202ENST00000355480 LYPD8Q6UX82 237 aa16.14■□□□□ 0.17
COL18A1-202ENST00000355480 LRFN3Q9BTN0 628 aa16.14■□□□□ 0.17
COL18A1-202ENST00000355480 KLK11Q9UBX7 282 aa16.14■□□□□ 0.17
COL18A1-202ENST00000355480 RER1O15258 196 aa16.14■□□□□ 0.17
COL18A1-202ENST00000355480 LYZL6O75951 148 aa16.14■□□□□ 0.17
COL18A1-202ENST00000355480 RBP4P02753 201 aa16.14■□□□□ 0.17
COL18A1-202ENST00000355480 SRSF5Q13243 272 aaKnown RBP16.14■□□□□ 0.17
COL18A1-202ENST00000355480 Q56UQ5 140 aa16.14■□□□□ 0.17
COL18A1-202ENST00000355480 OR51I2Q9H344 312 aa16.14■□□□□ 0.17
COL18A1-202ENST00000355480 OCIAD1Q9NX40 245 aa16.14■□□□□ 0.17
COL18A1-202ENST00000355480 OR13D1Q8NGV5 346 aa16.13■□□□□ 0.17
COL18A1-202ENST00000355480 OR2A5Q96R48 311 aa16.13■□□□□ 0.17
COL18A1-202ENST00000355480 CTDSP1Q9GZU7 261 aa16.13■□□□□ 0.17
COL18A1-202ENST00000355480 A0A1B0GUH1 482 aa16.13■□□□□ 0.17
COL18A1-202ENST00000355480 PDZK1IP1Q13113 114 aa16.13■□□□□ 0.17
COL18A1-202ENST00000355480 PRICKLE4Q2TBC4 344 aa16.13■□□□□ 0.17
COL18A1-202ENST00000355480 ZNF774Q6NX45 483 aa16.13■□□□□ 0.17
COL18A1-202ENST00000355480 MAMSTRQ6ZN01 415 aa16.13■□□□□ 0.17
COL18A1-202ENST00000355480 GPR32P1Q8NGA4 272 aa16.13■□□□□ 0.17
COL18A1-202ENST00000355480 OR5AP2Q8NGF4 316 aa16.13■□□□□ 0.17
COL18A1-202ENST00000355480 ADGRG7Q96K78 797 aa16.13■□□□□ 0.17
COL18A1-202ENST00000355480 NKX6-2Q9C056 277 aaPredicted RBP16.13■□□□□ 0.17
COL18A1-202ENST00000355480 IGLV3-16A0A075B6K0 115 aa16.13■□□□□ 0.17
COL18A1-202ENST00000355480 ADAM10O14672 748 aa16.13■□□□□ 0.17
COL18A1-202ENST00000355480 KRASP01116 189 aa16.13■□□□□ 0.17
COL18A1-202ENST00000355480 KIAA1958Q8N8K9 716 aa16.13■□□□□ 0.17
COL18A1-202ENST00000355480 AMER3Q8N944 861 aa16.13■□□□□ 0.17
COL18A1-202ENST00000355480 RXFP4Q8TDU9 374 aa16.13■□□□□ 0.17
COL18A1-202ENST00000355480 SMIM7Q9BQ49 75 aa16.13■□□□□ 0.17
COL18A1-202ENST00000355480 SIGLEC7Q9Y286 467 aa16.13■□□□□ 0.17
COL18A1-202ENST00000355480 K7EQS6 105 aa16.13■□□□□ 0.17
COL18A1-202ENST00000355480 SRP14P37108 136 aaKnown RBP16.13■□□□□ 0.17
COL18A1-202ENST00000355480 PABPC1L2AQ5JQF8 200 aa16.13■□□□□ 0.17
COL18A1-202ENST00000355480 DOK1Q99704 481 aa16.13■□□□□ 0.17
COL18A1-202ENST00000355480 FBXO8Q9NRD0 319 aa16.13■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms