RNA–Protein interactions for RNA: ENST00000354880.9

CTSA-202, Transcript of cathepsin A, humanhuman

TSL 2 BASIC

Gene CTSA, Length 1,820 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-202ENST00000354880 RNF144BQ7Z419 303 aa13.41□□□□□ -0.26
CTSA-202ENST00000354880 RNASE6Q93091 150 aaKnown RBP13.41□□□□□ -0.26
CTSA-202ENST00000354880 PIGTQ969N2 578 aa13.41□□□□□ -0.26
CTSA-202ENST00000354880 LRRC46Q96FV0 321 aa13.41□□□□□ -0.26
CTSA-202ENST00000354880 MARS2Q96GW9 593 aaKnown RBP13.41□□□□□ -0.26
CTSA-202ENST00000354880 ZC3HAV1LQ96H79 300 aaKnown RBP13.41□□□□□ -0.26
CTSA-202ENST00000354880 CMTM3Q96MX0 182 aa13.41□□□□□ -0.26
CTSA-202ENST00000354880 BBC3Q96PG8 261 aaPredicted RBP13.41□□□□□ -0.26
CTSA-202ENST00000354880 GPER1Q99527 375 aa13.41□□□□□ -0.26
CTSA-202ENST00000354880 PAPOLGQ9BWT3 736 aaKnown RBP13.41□□□□□ -0.26
CTSA-202ENST00000354880 FABP12A6NFH5 140 aa13.4□□□□□ -0.26
CTSA-202ENST00000354880 ZNF850A8MQ14 1090 aa13.4□□□□□ -0.26
CTSA-202ENST00000354880 CST4P01036 141 aa13.4□□□□□ -0.26
CTSA-202ENST00000354880 THBDP07204 575 aa13.4□□□□□ -0.26
CTSA-202ENST00000354880 PRKACBP22694 351 aa13.4□□□□□ -0.26
CTSA-202ENST00000354880 PPP5CP53041 499 aa13.4□□□□□ -0.26
CTSA-202ENST00000354880 RIN1Q13671 783 aa13.4□□□□□ -0.26
CTSA-202ENST00000354880 C2orf76Q3KRA6 126 aa13.4□□□□□ -0.26
CTSA-202ENST00000354880 UBE2NLQ5JXB2 153 aa13.4□□□□□ -0.26
CTSA-202ENST00000354880 PLCXD3Q63HM9 321 aa13.4□□□□□ -0.26
CTSA-202ENST00000354880 TMEM108Q6UXF1 575 aa13.4□□□□□ -0.26
CTSA-202ENST00000354880 MOB3CQ70IA8 216 aa13.4□□□□□ -0.26
CTSA-202ENST00000354880 WFDC8Q8IUA0 241 aa13.4□□□□□ -0.26
CTSA-202ENST00000354880 BHLHE23Q8NDY6 225 aa13.4□□□□□ -0.26
CTSA-202ENST00000354880 KLF14Q8TD94 323 aaPredicted RBP13.4□□□□□ -0.26
CTSA-202ENST00000354880 BORCS5Q969J3 196 aa13.4□□□□□ -0.26
CTSA-202ENST00000354880 PPP1R3EQ9H7J1 279 aa13.4□□□□□ -0.26
CTSA-202ENST00000354880 KCNJ16Q9NPI9 418 aa13.4□□□□□ -0.26
CTSA-202ENST00000354880 CYSLTR2Q9NS75 346 aa13.4□□□□□ -0.26
CTSA-202ENST00000354880 SLC7A11Q9UPY5 501 aa13.4□□□□□ -0.26
CTSA-202ENST00000354880 SPEF1Q9Y4P9 236 aa13.4□□□□□ -0.26
CTSA-202ENST00000354880 V9GYH0 126 aa13.4□□□□□ -0.26
CTSA-202ENST00000354880 LOC100289279A0A1B0GTE1 492 aa13.39□□□□□ -0.27
CTSA-202ENST00000354880 ANKRD30BLA7E2S9 258 aa13.39□□□□□ -0.27
CTSA-202ENST00000354880 CD40P25942 277 aa13.39□□□□□ -0.27
CTSA-202ENST00000354880 CD40LGP29965 261 aa13.39□□□□□ -0.27
CTSA-202ENST00000354880 TALDO1P37837 337 aa13.39□□□□□ -0.27
CTSA-202ENST00000354880 CAPZA1P52907 286 aa13.39□□□□□ -0.27
CTSA-202ENST00000354880 CDSNQ15517 529 aa13.39□□□□□ -0.27
CTSA-202ENST00000354880 FAM131AQ6UXB0 335 aa13.39□□□□□ -0.27
CTSA-202ENST00000354880 ANGPTL5Q86XS5 388 aa13.39□□□□□ -0.27
CTSA-202ENST00000354880 PNLDC1Q8NA58 520 aaKnown RBP13.39□□□□□ -0.27
CTSA-202ENST00000354880 HAVCR1Q96D42 359 aa13.39□□□□□ -0.27
CTSA-202ENST00000354880 BORCS8Q96FH0 119 aa13.39□□□□□ -0.27
CTSA-202ENST00000354880 CPNE2Q96FN4 548 aaPredicted RBP13.39□□□□□ -0.27
CTSA-202ENST00000354880 WFIKKN1Q96NZ8 548 aa13.39□□□□□ -0.27
CTSA-202ENST00000354880 CRIM1Q9NZV1 1036 aa13.39□□□□□ -0.27
CTSA-202ENST00000354880 EXTL2Q9UBQ6 330 aa13.39□□□□□ -0.27
CTSA-202ENST00000354880 GPR160Q9UJ42 338 aa13.39□□□□□ -0.27
CTSA-202ENST00000354880 B8ZZF3 427 aa13.39□□□□□ -0.27
CTSA-202ENST00000354880 SELEP16581 610 aa13.39□□□□□ -0.27
CTSA-202ENST00000354880 PTAFRP25105 342 aa13.39□□□□□ -0.27
CTSA-202ENST00000354880 RANBP1P43487 201 aa13.39□□□□□ -0.27
CTSA-202ENST00000354880 RBP2P50120 134 aa13.39□□□□□ -0.27
CTSA-202ENST00000354880 MTCP1P56278 107 aa13.39□□□□□ -0.27
CTSA-202ENST00000354880 PSG7Q13046 419 aa13.39□□□□□ -0.27
CTSA-202ENST00000354880 PRDX4Q13162 271 aa13.39□□□□□ -0.27
CTSA-202ENST00000354880 DCTN2Q13561 401 aaKnown RBP13.39□□□□□ -0.27
CTSA-202ENST00000354880 ZNF718Q3SXZ3 478 aa13.39□□□□□ -0.27
CTSA-202ENST00000354880 AWAT2Q6E213 333 aa13.39□□□□□ -0.27
CTSA-202ENST00000354880 CRIP3Q6Q6R5 217 aa13.39□□□□□ -0.27
CTSA-202ENST00000354880 METAP1DQ6UB28 335 aaPredicted RBP13.39□□□□□ -0.27
CTSA-202ENST00000354880 LHFPL2Q6ZUX7 228 aa13.39□□□□□ -0.27
CTSA-202ENST00000354880 RFT1Q96AA3 541 aa13.39□□□□□ -0.27
CTSA-202ENST00000354880 SLC25A38Q96DW6 304 aa13.39□□□□□ -0.27
CTSA-202ENST00000354880 TMEM272A0A1B0GTI8 110 aa13.38□□□□□ -0.27
CTSA-202ENST00000354880 FAM230AA0A1W2PPH8 454 aa13.38□□□□□ -0.27
CTSA-202ENST00000354880 LILRA1O75019 489 aa13.38□□□□□ -0.27
CTSA-202ENST00000354880 MPV17P39210 176 aa13.38□□□□□ -0.27
CTSA-202ENST00000354880 OR3A4PP47883 348 aa13.38□□□□□ -0.27
CTSA-202ENST00000354880 FUT6P51993 359 aa13.38□□□□□ -0.27
CTSA-202ENST00000354880 ART1P52961 327 aa13.38□□□□□ -0.27
CTSA-202ENST00000354880 SNTB2Q13425 540 aaKnown RBP13.38□□□□□ -0.27
CTSA-202ENST00000354880 ZDHHC23Q8IYP9 409 aa13.38□□□□□ -0.27
CTSA-202ENST00000354880 SYNPRQ8TBG9 265 aa13.38□□□□□ -0.27
CTSA-202ENST00000354880 RAB40AQ8WXH6 277 aa13.38□□□□□ -0.27
CTSA-202ENST00000354880 ABCG5Q9H222 651 aa13.38□□□□□ -0.27
CTSA-202ENST00000354880 KCNK15Q9H427 330 aa13.38□□□□□ -0.27
CTSA-202ENST00000354880 NGBQ9NPG2 151 aa13.38□□□□□ -0.27
CTSA-202ENST00000354880 RHBDL2Q9NX52 303 aa13.38□□□□□ -0.27
CTSA-202ENST00000354880 MRPL15Q9P015 296 aaKnown RBP13.38□□□□□ -0.27
CTSA-202ENST00000354880 MRPS28Q9Y2Q9 187 aaKnown RBP13.38□□□□□ -0.27
CTSA-202ENST00000354880 MPC1Q9Y5U8 109 aa13.38□□□□□ -0.27
CTSA-202ENST00000354880 IQCF6A8MYZ5 107 aa13.37□□□□□ -0.27
CTSA-202ENST00000354880 BPNT1O95861 308 aa13.37□□□□□ -0.27
CTSA-202ENST00000354880 PRB1P04280 392 aa13.37□□□□□ -0.27
CTSA-202ENST00000354880 GCH1P30793 250 aa13.37□□□□□ -0.27
CTSA-202ENST00000354880 PTGFRP43088 359 aa13.37□□□□□ -0.27
CTSA-202ENST00000354880 PLA2G7Q13093 441 aa13.37□□□□□ -0.27
CTSA-202ENST00000354880 MADCAM1Q13477 382 aa13.37□□□□□ -0.27
CTSA-202ENST00000354880 IL18Q14116 193 aa13.37□□□□□ -0.27
CTSA-202ENST00000354880 ZNF79Q15937 498 aa13.37□□□□□ -0.27
CTSA-202ENST00000354880 CEACAM21Q3KPI0 293 aa13.37□□□□□ -0.27
CTSA-202ENST00000354880 MBNL2Q5VZF2 373 aaKnown RBP13.37□□□□□ -0.27
CTSA-202ENST00000354880 RGS7BPQ6MZT1 257 aaPredicted RBP13.37□□□□□ -0.27
CTSA-202ENST00000354880 CMTM4Q8IZR5 234 aa13.37□□□□□ -0.27
CTSA-202ENST00000354880 OR4M1Q8NGD0 313 aa13.37□□□□□ -0.27
CTSA-202ENST00000354880 OR5D18Q8NGL1 313 aa13.37□□□□□ -0.27
CTSA-202ENST00000354880 SOSTQ9BQB4 213 aa13.37□□□□□ -0.27
CTSA-202ENST00000354880 NDRG3Q9UGV2 375 aa13.37□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms