RNA–Protein interactions for RNA: ENST00000354725.7

SND1-201, Transcript of staphylococcal nuclease and tudor domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SND1, Length 3,476 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-201ENST00000354725 HIST1H2BCP62807 126 aa9.65□□□□□ -0.87
SND1-201ENST00000354725 HIST2H2BEQ16778 126 aa9.65□□□□□ -0.87
SND1-201ENST00000354725 HIST2H2BFQ5QNW6 126 aaPredicted RBP9.65□□□□□ -0.87
SND1-201ENST00000354725 ELFN2Q5R3F8 820 aa9.65□□□□□ -0.87
SND1-201ENST00000354725 BIVMQ86UB2 503 aa9.65□□□□□ -0.87
SND1-201ENST00000354725 SYS1Q8N2H4 156 aa9.65□□□□□ -0.87
SND1-201ENST00000354725 HPSE2Q8WWQ2 592 aa9.65□□□□□ -0.87
SND1-201ENST00000354725 HIST1H2BHQ93079 126 aa9.65□□□□□ -0.87
SND1-201ENST00000354725 ZFP3Q96NJ6 502 aa9.65□□□□□ -0.87
SND1-201ENST00000354725 HIST1H2BNQ99877 126 aa9.65□□□□□ -0.87
SND1-201ENST00000354725 HIST1H2BMQ99879 126 aa9.65□□□□□ -0.87
SND1-201ENST00000354725 KPTNQ9Y664 436 aa9.65□□□□□ -0.87
SND1-201ENST00000354725 ZDBF2Q9HCK1 2354 aa9.65□□□□□ -0.87
SND1-201ENST00000354725 TRAV26-1A0A087WT03 109 aa9.64□□□□□ -0.87
SND1-201ENST00000354725 A0A087WZY1 265 aa9.64□□□□□ -0.87
SND1-201ENST00000354725 TRAV14DV4A0A0A6YYC5 116 aa9.64□□□□□ -0.87
SND1-201ENST00000354725 A0A1W2PP55 124 aa9.64□□□□□ -0.87
SND1-201ENST00000354725 MFNGO00587 321 aa9.64□□□□□ -0.87
SND1-201ENST00000354725 FOXS1O43638 330 aa9.64□□□□□ -0.87
SND1-201ENST00000354725 C8orf89P0DMQ9 161 aa9.64□□□□□ -0.87
SND1-201ENST00000354725 HKR1P10072 659 aa9.64□□□□□ -0.87
SND1-201ENST00000354725 CFPP27918 469 aa9.64□□□□□ -0.87
SND1-201ENST00000354725 IL12BP29460 328 aa9.64□□□□□ -0.87
SND1-201ENST00000354725 AGTR1P30556 359 aa9.64□□□□□ -0.87
SND1-201ENST00000354725 CAV2P51636 162 aa9.64□□□□□ -0.87
SND1-201ENST00000354725 EIF5AP63241 154 aaKnown RBP9.64□□□□□ -0.87
SND1-201ENST00000354725 MGAT2Q10469 447 aa9.64□□□□□ -0.87
SND1-201ENST00000354725 ZNF684Q5T5D7 378 aa9.64□□□□□ -0.87
SND1-201ENST00000354725 OVCH1Q7RTY7 1134 aa9.64□□□□□ -0.87
SND1-201ENST00000354725 OR52B4Q8NGK2 314 aa9.64□□□□□ -0.87
SND1-201ENST00000354725 OR10R2Q8NGX6 335 aa9.64□□□□□ -0.87
SND1-201ENST00000354725 TMEM239Q8WW34 195 aa9.64□□□□□ -0.87
SND1-201ENST00000354725 SMIM19Q96E16 107 aa9.64□□□□□ -0.87
SND1-201ENST00000354725 HIST1H2BLQ99880 126 aa9.64□□□□□ -0.87
SND1-201ENST00000354725 ALKBH7Q9BT30 221 aaPredicted RBP9.64□□□□□ -0.87
SND1-201ENST00000354725 NDC1Q9BTX1 674 aa9.64□□□□□ -0.87
SND1-201ENST00000354725 TPSD1Q9BZJ3 242 aa9.64□□□□□ -0.87
SND1-201ENST00000354725 KLHL28Q9NXS3 571 aa9.64□□□□□ -0.87
SND1-201ENST00000354725 TMED3Q9Y3Q3 217 aa9.64□□□□□ -0.87
SND1-201ENST00000354725 FLVCR1Q9Y5Y0 555 aa9.64□□□□□ -0.87
SND1-201ENST00000354725 COL5A1P20908 1838 aaPredicted RBP9.64□□□□□ -0.87
SND1-201ENST00000354725 IGLON5A6NGN9 336 aa9.64□□□□□ -0.87
SND1-201ENST00000354725 GGT3PA6NGU5 568 aa9.64□□□□□ -0.87
SND1-201ENST00000354725 ZNF705GA8MUZ8 300 aaPredicted RBP9.64□□□□□ -0.87
SND1-201ENST00000354725 GOSR2O14653 212 aa9.64□□□□□ -0.87
SND1-201ENST00000354725 TNFSF14O43557 240 aa9.64□□□□□ -0.87
SND1-201ENST00000354725 ATP1B1P05026 303 aa9.64□□□□□ -0.87
SND1-201ENST00000354725 NBEAP1P0C6P0 100 aa9.64□□□□□ -0.87
SND1-201ENST00000354725 CCL2P13500 99 aa9.64□□□□□ -0.87
SND1-201ENST00000354725 CSRP1P21291 193 aaKnown RBP9.64□□□□□ -0.87
SND1-201ENST00000354725 PPP2CBP62714 309 aa9.64□□□□□ -0.87
SND1-201ENST00000354725 PPP2CAP67775 309 aa9.64□□□□□ -0.87
SND1-201ENST00000354725 NKAIN1Q4KMZ8 207 aa9.64□□□□□ -0.87
SND1-201ENST00000354725 DHRS11Q6UWP2 260 aa9.64□□□□□ -0.87
SND1-201ENST00000354725 LRRC25Q8N386 305 aaPredicted RBP9.64□□□□□ -0.87
SND1-201ENST00000354725 RFLNBQ8N5W9 214 aa9.64□□□□□ -0.87
SND1-201ENST00000354725 OR4D9Q8NGE8 314 aa9.64□□□□□ -0.87
SND1-201ENST00000354725 OR8U1Q8NH10 309 aa9.64□□□□□ -0.87
SND1-201ENST00000354725 TAAR8Q969N4 342 aa9.64□□□□□ -0.87
SND1-201ENST00000354725 STACQ99469 402 aa9.64□□□□□ -0.87
SND1-201ENST00000354725 DPH1Q9BZG8 443 aa9.64□□□□□ -0.87
SND1-201ENST00000354725 MSL2Q9HCI7 577 aa9.64□□□□□ -0.87
SND1-201ENST00000354725 HRASLSQ9HDD0 168 aa9.64□□□□□ -0.87
SND1-201ENST00000354725 YAE1D1Q9NRH1 226 aa9.64□□□□□ -0.87
SND1-201ENST00000354725 FOXJ2Q9P0K8 574 aa9.64□□□□□ -0.87
SND1-201ENST00000354725 MYOTQ9UBF9 498 aa9.64□□□□□ -0.87
SND1-201ENST00000354725 V9GYS6 101 aa9.64□□□□□ -0.87
SND1-201ENST00000354725 A0A0B4J2E0 115 aa9.63□□□□□ -0.87
SND1-201ENST00000354725 A0A1B0GX12 115 aa9.63□□□□□ -0.87
SND1-201ENST00000354725 M0QXV9 152 aa9.63□□□□□ -0.87
SND1-201ENST00000354725 MAGEB4O15481 346 aaPredicted RBP9.63□□□□□ -0.87
SND1-201ENST00000354725 OR2F2O95006 317 aa9.63□□□□□ -0.87
SND1-201ENST00000354725 NKX6-1P78426 367 aaPredicted RBP9.63□□□□□ -0.87
SND1-201ENST00000354725 OR2F1Q13607 317 aa9.63□□□□□ -0.87
SND1-201ENST00000354725 CRMP1Q14194 572 aa9.63□□□□□ -0.87
SND1-201ENST00000354725 OR1Q1Q15612 314 aa9.63□□□□□ -0.87
SND1-201ENST00000354725 MST1LQ2TV78 715 aa9.63□□□□□ -0.87
SND1-201ENST00000354725 H1FNTQ75WM6 255 aaPredicted RBP9.63□□□□□ -0.87
SND1-201ENST00000354725 OR1L6Q8NGR2 347 aa9.63□□□□□ -0.87
SND1-201ENST00000354725 CTHRC1Q96CG8 243 aa9.63□□□□□ -0.87
SND1-201ENST00000354725 C4orf36Q96KX1 117 aa9.63□□□□□ -0.87
SND1-201ENST00000354725 CD180Q99467 661 aa9.63□□□□□ -0.87
SND1-201ENST00000354725 ZMAT3Q9HA38 289 aaKnown RBP9.63□□□□□ -0.87
SND1-201ENST00000354725 MRPL22Q9NWU5 206 aaKnown RBP9.63□□□□□ -0.87
SND1-201ENST00000354725 ASPMQ8IZT6 3477 aa9.63□□□□□ -0.87
SND1-201ENST00000354725 UBE2QL1A1L167 161 aa9.63□□□□□ -0.87
SND1-201ENST00000354725 DBIP07108 87 aaKnown RBP9.63□□□□□ -0.87
SND1-201ENST00000354725 NGFRP08138 427 aa9.63□□□□□ -0.87
SND1-201ENST00000354725 CCNOP22674 350 aa9.63□□□□□ -0.87
SND1-201ENST00000354725 SULT1A1P50225 295 aa9.63□□□□□ -0.87
SND1-201ENST00000354725 ZNF345Q14585 488 aa9.63□□□□□ -0.87
SND1-201ENST00000354725 CDK5R1Q15078 307 aa9.63□□□□□ -0.87
SND1-201ENST00000354725 HIST2H3AQ71DI3 136 aa9.63□□□□□ -0.87
SND1-201ENST00000354725 CEACAM19Q7Z692 300 aa9.63□□□□□ -0.87
SND1-201ENST00000354725 LYG1Q8N1E2 194 aa9.63□□□□□ -0.87
SND1-201ENST00000354725 RAB42Q8N4Z0 105 aa9.63□□□□□ -0.87
SND1-201ENST00000354725 OR13C5Q8NGS8 318 aa9.63□□□□□ -0.87
SND1-201ENST00000354725 NTNG2Q96CW9 530 aa9.63□□□□□ -0.87
SND1-201ENST00000354725 TMEM74BQ9NUR3 256 aa9.63□□□□□ -0.87
SND1-201ENST00000354725 CPAMD8Q8IZJ3 1885 aa9.63□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms