RNA–Protein interactions for RNA: ENST00000354497.4

RTN3-204, Transcript of reticulon 3, humanhuman

TSL 2 BASIC

Gene RTN3, Length 1,407 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-204ENST00000354497 OR8J2Q8NGG1 315 aa9.44□□□□□ -0.9
RTN3-204ENST00000354497 FGFBP3Q8TAT2 258 aa9.44□□□□□ -0.9
RTN3-204ENST00000354497 TAAR8Q969N4 342 aa9.44□□□□□ -0.9
RTN3-204ENST00000354497 CREB3L1Q96BA8 519 aa9.44□□□□□ -0.9
RTN3-204ENST00000354497 OTULINQ96BN8 352 aa9.44□□□□□ -0.9
RTN3-204ENST00000354497 NSMCE2Q96MF7 247 aa9.44□□□□□ -0.9
RTN3-204ENST00000354497 RBP7Q96R05 134 aa9.44□□□□□ -0.9
RTN3-204ENST00000354497 C2orf88Q9BSF0 95 aa9.44□□□□□ -0.9
RTN3-204ENST00000354497 EGLN1Q9GZT9 426 aa9.44□□□□□ -0.9
RTN3-204ENST00000354497 KRT84Q9NSB2 600 aa9.44□□□□□ -0.9
RTN3-204ENST00000354497 THUMPD1Q9NXG2 353 aaKnown RBP9.44□□□□□ -0.9
RTN3-204ENST00000354497 OR5V1Q9UGF6 321 aa9.44□□□□□ -0.9
RTN3-204ENST00000354497 EGFL7Q9UHF1 273 aa9.44□□□□□ -0.9
RTN3-204ENST00000354497 INSIG2Q9Y5U4 225 aa9.44□□□□□ -0.9
RTN3-204ENST00000354497 NUBP2Q9Y5Y2 271 aa9.44□□□□□ -0.9
RTN3-204ENST00000354497 V9GYH0 126 aa9.44□□□□□ -0.9
RTN3-204ENST00000354497 PLSCR5A0PG75 271 aa9.43□□□□□ -0.9
RTN3-204ENST00000354497 C7orf66A4D0T2 115 aa9.43□□□□□ -0.9
RTN3-204ENST00000354497 SLC22A31A6NKX4 558 aa9.43□□□□□ -0.9
RTN3-204ENST00000354497 UBE2CO00762 179 aa9.43□□□□□ -0.9
RTN3-204ENST00000354497 OR2T1O43869 369 aa9.43□□□□□ -0.9
RTN3-204ENST00000354497 IGHV1-46P01743 117 aa9.43□□□□□ -0.9
RTN3-204ENST00000354497 PRB2P02812 416 aaPredicted RBP9.43□□□□□ -0.9
RTN3-204ENST00000354497 TNFSF8P32971 234 aa9.43□□□□□ -0.9
RTN3-204ENST00000354497 CEACAM6P40199 344 aa9.43□□□□□ -0.9
RTN3-204ENST00000354497 CSNK1A1P48729 337 aa9.43□□□□□ -0.9
RTN3-204ENST00000354497 KRTAP10-3P60369 221 aa9.43□□□□□ -0.9
RTN3-204ENST00000354497 EGR4Q05215 589 aa9.43□□□□□ -0.9
RTN3-204ENST00000354497 LARS2Q15031 903 aaKnown RBP9.43□□□□□ -0.9
RTN3-204ENST00000354497 TATDN3Q17R31 274 aa9.43□□□□□ -0.9
RTN3-204ENST00000354497 TBC1D28Q2M2D7 210 aa9.43□□□□□ -0.9
RTN3-204ENST00000354497 COX20Q5RI15 118 aa9.43□□□□□ -0.9
RTN3-204ENST00000354497 SPATA46Q5T0L3 261 aa9.43□□□□□ -0.9
RTN3-204ENST00000354497 ETV3LQ6ZN32 361 aa9.43□□□□□ -0.9
RTN3-204ENST00000354497 RNF148Q8N7C7 305 aa9.43□□□□□ -0.9
RTN3-204ENST00000354497 CPEB3Q8NE35 698 aaKnown RBP9.43□□□□□ -0.9
RTN3-204ENST00000354497 OR1J1Q8NGS3 322 aa9.43□□□□□ -0.9
RTN3-204ENST00000354497 EDARADDQ8WWZ3 215 aa9.43□□□□□ -0.9
RTN3-204ENST00000354497 GEMIN6Q8WXD5 167 aaKnown RBP9.43□□□□□ -0.9
RTN3-204ENST00000354497 DIRC2Q96SL1 478 aa9.43□□□□□ -0.9
RTN3-204ENST00000354497 MBOAT4Q96T53 435 aa9.43□□□□□ -0.9
RTN3-204ENST00000354497 TOR3AQ9H497 397 aa9.43□□□□□ -0.9
RTN3-204ENST00000354497 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP9.43□□□□□ -0.9
RTN3-204ENST00000354497 IMPAD1Q9NX62 359 aa9.43□□□□□ -0.9
RTN3-204ENST00000354497 SCP2D1Q9UJQ7 156 aa9.43□□□□□ -0.9
RTN3-204ENST00000354497 NPTNQ9Y639 398 aa9.43□□□□□ -0.9
RTN3-204ENST00000354497 NUP214P35658 2090 aaPredicted RBP9.43□□□□□ -0.9
RTN3-204ENST00000354497 NBEAL2Q6ZNJ1 2754 aa9.42□□□□□ -0.9
RTN3-204ENST00000354497 TRAV40A0A0B4J280 105 aa9.42□□□□□ -0.9
RTN3-204ENST00000354497 LOC100130705A0A1B0GUX0 176 aa9.42□□□□□ -0.9
RTN3-204ENST00000354497 CLPSL1A2RUU4 121 aa9.42□□□□□ -0.9
RTN3-204ENST00000354497 MCIDASD6RGH6 385 aa9.42□□□□□ -0.9
RTN3-204ENST00000354497 L7N2F9 121 aa9.42□□□□□ -0.9
RTN3-204ENST00000354497 ARPC2O15144 300 aa9.42□□□□□ -0.9
RTN3-204ENST00000354497 EIF3GO75821 320 aaKnown RBP eCLIP9.42□□□□□ -0.91e-11■■■□□ 15.7
RTN3-204ENST00000354497 BCHEP06276 602 aa9.42□□□□□ -0.9
RTN3-204ENST00000354497 SLC2A1P11166 492 aa9.42□□□□□ -0.9
RTN3-204ENST00000354497 CCNOP22674 350 aa9.42□□□□□ -0.9
RTN3-204ENST00000354497 LAP3P28838 519 aa9.42□□□□□ -0.9
RTN3-204ENST00000354497 RBMXP38159 391 aaKnown RBP9.42□□□□□ -0.9
RTN3-204ENST00000354497 UCP2P55851 309 aa9.42□□□□□ -0.9
RTN3-204ENST00000354497 SSX2Q16385 188 aa9.42□□□□□ -0.9
RTN3-204ENST00000354497 TAF9Q16594 264 aa9.42□□□□□ -0.9
RTN3-204ENST00000354497 RPS26P11Q5JNZ5 115 aaPredicted RBP9.42□□□□□ -0.9
RTN3-204ENST00000354497 SPANXN4Q5MJ08 99 aa9.42□□□□□ -0.9
RTN3-204ENST00000354497 SAPCD1Q5SSQ6 148 aa9.42□□□□□ -0.9
RTN3-204ENST00000354497 FAM69AQ5T7M9 428 aa9.42□□□□□ -0.9
RTN3-204ENST00000354497 CD276Q5ZPR3 534 aa9.42□□□□□ -0.9
RTN3-204ENST00000354497 GLYATQ6IB77 296 aa9.42□□□□□ -0.9
RTN3-204ENST00000354497 TMPRSS11AQ6ZMR5 421 aa9.42□□□□□ -0.9
RTN3-204ENST00000354497 ZNF621Q6ZSS3 439 aa9.42□□□□□ -0.9
RTN3-204ENST00000354497 ZNF627Q7L945 461 aa9.42□□□□□ -0.9
RTN3-204ENST00000354497 OR8H2Q8N162 312 aa9.42□□□□□ -0.9
RTN3-204ENST00000354497 SPICQ8N5J4 248 aa9.42□□□□□ -0.9
RTN3-204ENST00000354497 C10orf53Q8N6V4 93 aa9.42□□□□□ -0.9
RTN3-204ENST00000354497 FAM156AQ8NDB6 213 aa9.42□□□□□ -0.9
RTN3-204ENST00000354497 OR2T4Q8NH00 348 aa9.42□□□□□ -0.9
RTN3-204ENST00000354497 GLYATL2Q8WU03 294 aa9.42□□□□□ -0.9
RTN3-204ENST00000354497 RFT1Q96AA3 541 aa9.42□□□□□ -0.9
RTN3-204ENST00000354497 LRR1Q96L50 414 aa9.42□□□□□ -0.9
RTN3-204ENST00000354497 ASPNQ9BXN1 380 aa9.42□□□□□ -0.9
RTN3-204ENST00000354497 TCF7L1Q9HCS4 588 aa9.42□□□□□ -0.9
RTN3-204ENST00000354497 C1RLQ9NZP8 487 aa9.42□□□□□ -0.9
RTN3-204ENST00000354497 NDUFAF4Q9P032 175 aa9.42□□□□□ -0.9
RTN3-204ENST00000354497 P2RX2Q9UBL9 471 aa9.42□□□□□ -0.9
RTN3-204ENST00000354497 MIOXQ9UGB7 285 aa9.42□□□□□ -0.9
RTN3-204ENST00000354497 NDRG4Q9ULP0 352 aaKnown RBP9.42□□□□□ -0.9
RTN3-204ENST00000354497 AURKCQ9UQB9 309 aa9.42□□□□□ -0.9
RTN3-204ENST00000354497 ALG5Q9Y673 324 aa9.42□□□□□ -0.9
RTN3-204ENST00000354497 TRAV36DV7A0A075B6V5 113 aa9.41□□□□□ -0.9
RTN3-204ENST00000354497 E9PQ18 207 aa9.41□□□□□ -0.9
RTN3-204ENST00000354497 MS4A18H0YCH9 400 aa9.41□□□□□ -0.9
RTN3-204ENST00000354497 FARS2O95363 451 aaKnown RBP9.41□□□□□ -0.9
RTN3-204ENST00000354497 NGFP01138 241 aa9.41□□□□□ -0.9
RTN3-204ENST00000354497 GLAP06280 429 aa9.41□□□□□ -0.9
RTN3-204ENST00000354497 RAP2AP10114 183 aa9.41□□□□□ -0.9
RTN3-204ENST00000354497 AHCYP23526 432 aa9.41□□□□□ -0.9
RTN3-204ENST00000354497 PSMB9P28065 219 aa9.41□□□□□ -0.9
RTN3-204ENST00000354497 S100A3P33764 101 aa9.41□□□□□ -0.9
RTN3-204ENST00000354497 MAP2K3P46734 347 aa9.41□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms