RNA–Protein interactions for RNA: ENST00000353411.10

SKP1-202, Transcript of S-phase kinase associated protein 1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene SKP1, Length 9,474 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1-202ENST00000353411 AGAP20933 346 aa4.56□□□□□ -1.68
SKP1-202ENST00000353411 P2RY1P47900 373 aa4.56□□□□□ -1.68
SKP1-202ENST00000353411 ERVS71-1P61550 626 aa4.56□□□□□ -1.68
SKP1-202ENST00000353411 ARF6P62330 175 aa4.56□□□□□ -1.68
SKP1-202ENST00000353411 PLPPR5Q32ZL2 321 aa4.56□□□□□ -1.68
SKP1-202ENST00000353411 PHF19Q5T6S3 580 aa4.56□□□□□ -1.68
SKP1-202ENST00000353411 ZNF468Q5VIY5 522 aaPredicted RBP4.56□□□□□ -1.68
SKP1-202ENST00000353411 CD200R1LQ6Q8B3 271 aa4.56□□□□□ -1.68
SKP1-202ENST00000353411 ZNF765Q7L2R6 523 aa4.56□□□□□ -1.68
SKP1-202ENST00000353411 MSRB3Q8IXL7 192 aa4.56□□□□□ -1.68
SKP1-202ENST00000353411 SUMF1Q8NBK3 374 aa4.56□□□□□ -1.68
SKP1-202ENST00000353411 MSI2Q96DH6 328 aaKnown RBP4.56□□□□□ -1.68
SKP1-202ENST00000353411 NAT8BQ9UHF3 227 aa4.56□□□□□ -1.68
SKP1-202ENST00000353411 CEBPDP49716 269 aaPredicted RBP4.56□□□□□ -1.68
SKP1-202ENST00000353411 EMC4Q5J8M3 183 aa4.56□□□□□ -1.68
SKP1-202ENST00000353411 DHRS13Q6UX07 377 aa4.56□□□□□ -1.68
SKP1-202ENST00000353411 C19orf43Q9BQ61 176 aa4.56□□□□□ -1.68
SKP1-202ENST00000353411 RSG1Q9BU20 258 aa4.56□□□□□ -1.68
SKP1-202ENST00000353411 IGFLR1Q9H665 355 aa4.56□□□□□ -1.68
SKP1-202ENST00000353411 PLAC1Q9HBJ0 212 aa4.56□□□□□ -1.68
SKP1-202ENST00000353411 BCL2L10Q9HD36 194 aa4.56□□□□□ -1.68
SKP1-202ENST00000353411 YIPF1Q9Y548 306 aa4.56□□□□□ -1.68
SKP1-202ENST00000353411 RAB29O14966 203 aa4.55□□□□□ -1.68
SKP1-202ENST00000353411 HPRT1P00492 218 aa4.55□□□□□ -1.68
SKP1-202ENST00000353411 ZNF43P17038 809 aa4.55□□□□□ -1.68
SKP1-202ENST00000353411 CD1CP29017 333 aa4.55□□□□□ -1.68
SKP1-202ENST00000353411 BLVRBP30043 206 aaPredicted RBP4.55□□□□□ -1.68
SKP1-202ENST00000353411 BCL6P41182 706 aa4.55□□□□□ -1.68
SKP1-202ENST00000353411 AGFG1P52594 562 aaKnown RBP4.55□□□□□ -1.68
SKP1-202ENST00000353411 CCL23P55773 120 aa4.55□□□□□ -1.68
SKP1-202ENST00000353411 RAB38P57729 211 aa4.55□□□□□ -1.68
SKP1-202ENST00000353411 FCRL6Q6DN72 434 aa4.55□□□□□ -1.68
SKP1-202ENST00000353411 BPIFA4PQ86YQ2 179 aa4.55□□□□□ -1.68
SKP1-202ENST00000353411 OR10G6Q8NH81 332 aa4.55□□□□□ -1.68
SKP1-202ENST00000353411 MS4A6EQ96DS6 147 aa4.55□□□□□ -1.68
SKP1-202ENST00000353411 MRPL38Q96DV4 380 aaKnown RBP4.55□□□□□ -1.68
SKP1-202ENST00000353411 DNAJA3Q96EY1 480 aa4.55□□□□□ -1.68
SKP1-202ENST00000353411 CITED1Q99966 193 aa4.55□□□□□ -1.68
SKP1-202ENST00000353411 ZBP1Q9H171 429 aa4.55□□□□□ -1.68
SKP1-202ENST00000353411 HEXA-AS1Q9H8Q6 139 aa4.55□□□□□ -1.68
SKP1-202ENST00000353411 ELOVL2Q9NXB9 296 aa4.55□□□□□ -1.68
SKP1-202ENST00000353411 KCPQ6ZWJ8 1503 aa4.55□□□□□ -1.68
SKP1-202ENST00000353411 DDAH2O95865 285 aa4.55□□□□□ -1.68
SKP1-202ENST00000353411 COX5BP10606 129 aa4.55□□□□□ -1.68
SKP1-202ENST00000353411 C19orf48Q6RUI8 117 aa4.55□□□□□ -1.68
SKP1-202ENST00000353411 OR52N4Q8NGI2 321 aa4.55□□□□□ -1.68
SKP1-202ENST00000353411 ATP5SQ99766 215 aa4.55□□□□□ -1.68
SKP1-202ENST00000353411 FAAP24Q9BTP7 215 aa4.55□□□□□ -1.68
SKP1-202ENST00000353411 SMG9Q9H0W8 520 aaKnown RBP4.55□□□□□ -1.68
SKP1-202ENST00000353411 GVINP1Q7Z2Y8 2422 aa4.55□□□□□ -1.68
SKP1-202ENST00000353411 C2orf16Q68DN1 1984 aa4.55□□□□□ -1.68
SKP1-202ENST00000353411 C9J4A7 227 aa4.55□□□□□ -1.68
SKP1-202ENST00000353411 MKRN2OSH3BPM6 223 aa4.55□□□□□ -1.68
SKP1-202ENST00000353411 PGA3P0DJD8 388 aa4.55□□□□□ -1.68
SKP1-202ENST00000353411 LAG3P18627 525 aa4.55□□□□□ -1.68
SKP1-202ENST00000353411 RPS4Y1P22090 263 aaKnown RBP4.55□□□□□ -1.68
SKP1-202ENST00000353411 S100A7P31151 101 aa4.55□□□□□ -1.68
SKP1-202ENST00000353411 HINT1P49773 126 aaPredicted RBP4.55□□□□□ -1.68
SKP1-202ENST00000353411 SNU13P55769 128 aaKnown RBP4.55□□□□□ -1.68
SKP1-202ENST00000353411 EFNB1P98172 346 aa4.55□□□□□ -1.68
SKP1-202ENST00000353411 PDGFRLQ15198 375 aa4.55□□□□□ -1.68
SKP1-202ENST00000353411 TMEM64Q6YI46 380 aa4.55□□□□□ -1.68
SKP1-202ENST00000353411 ORAOV1Q8WV07 137 aa4.55□□□□□ -1.68
SKP1-202ENST00000353411 KCNE4Q8WWG9 221 aa4.55□□□□□ -1.68
SKP1-202ENST00000353411 SPTSSAQ969W0 71 aa4.55□□□□□ -1.68
SKP1-202ENST00000353411 TPPP3Q9BW30 176 aa4.55□□□□□ -1.68
SKP1-202ENST00000353411 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP4.55□□□□□ -1.681e-6■■□□□ 12.9
SKP1-202ENST00000353411 DTX4Q9Y2E6 619 aa4.55□□□□□ -1.68
SKP1-202ENST00000353411 FREM1Q5H8C1 2179 aa4.55□□□□□ -1.68
SKP1-202ENST00000353411 CLEC3AO75596 197 aa4.55□□□□□ -1.68
SKP1-202ENST00000353411 RHBDL1O75783 438 aa4.55□□□□□ -1.68
SKP1-202ENST00000353411 DBHP09172 617 aa4.55□□□□□ -1.68
SKP1-202ENST00000353411 RPL13AP40429 203 aaKnown RBP4.55□□□□□ -1.68
SKP1-202ENST00000353411 RPEL1Q2QD12 228 aa4.55□□□□□ -1.68
SKP1-202ENST00000353411 MRPL2Q5T653 305 aaKnown RBP4.55□□□□□ -1.68
SKP1-202ENST00000353411 C1orf185Q5T7R7 199 aa4.55□□□□□ -1.68
SKP1-202ENST00000353411 MDGA1Q8NFP4 955 aa4.55□□□□□ -1.68
SKP1-202ENST00000353411 LCORQ96JN0 433 aaPredicted RBP4.55□□□□□ -1.68
SKP1-202ENST00000353411 LMLNQ96KR4 655 aa4.55□□□□□ -1.68
SKP1-202ENST00000353411 CNTD2Q9H8S5 307 aa4.55□□□□□ -1.68
SKP1-202ENST00000353411 THADAQ6YHU6 1953 aa4.55□□□□□ -1.68
SKP1-202ENST00000353411 FOCADQ5VW36 1801 aa4.55□□□□□ -1.68
SKP1-202ENST00000353411 COLCA2A8K830 154 aa4.55□□□□□ -1.68
SKP1-202ENST00000353411 NPBWR2P48146 333 aa4.55□□□□□ -1.68
SKP1-202ENST00000353411 COMPP49747 757 aaPredicted RBP4.55□□□□□ -1.68
SKP1-202ENST00000353411 ELLP55199 621 aaPredicted RBP4.55□□□□□ -1.68
SKP1-202ENST00000353411 LIM2P55344 173 aa4.55□□□□□ -1.68
SKP1-202ENST00000353411 RPS15AP62244 130 aaKnown RBP4.55□□□□□ -1.68
SKP1-202ENST00000353411 POM121L1PQ3SYA9 428 aa4.55□□□□□ -1.68
SKP1-202ENST00000353411 MARCH8Q5T0T0 291 aa4.55□□□□□ -1.68
SKP1-202ENST00000353411 PLXDC2Q6UX71 529 aa4.55□□□□□ -1.68
SKP1-202ENST00000353411 SYT9Q86SS6 491 aa4.55□□□□□ -1.68
SKP1-202ENST00000353411 OR5B3Q8NH48 314 aa4.55□□□□□ -1.68
SKP1-202ENST00000353411 AQP10Q96PS8 301 aa4.55□□□□□ -1.68
SKP1-202ENST00000353411 TMEM208Q9BTX3 173 aa4.55□□□□□ -1.68
SKP1-202ENST00000353411 VCX2Q9H322 139 aa4.55□□□□□ -1.68
SKP1-202ENST00000353411 OR2M5A3KFT3 312 aa4.55□□□□□ -1.68
SKP1-202ENST00000353411 TRAPPC2LH3BP13 241 aa4.55□□□□□ -1.68
SKP1-202ENST00000353411 ZNF737O75373 536 aa4.55□□□□□ -1.68
SKP1-202ENST00000353411 DDNO94850 711 aaPredicted RBP4.55□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 55.8 ms