RNA–Protein interactions for RNA: ENST00000352993.7

BRCA1-201, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 5 BASIC

Gene BRCA1, Length 3,668 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-201ENST00000352993 NHLH2Q02577 135 aa6.78□□□□□ -1.32
BRCA1-201ENST00000352993 GLO1Q04760 184 aa6.78□□□□□ -1.32
BRCA1-201ENST00000352993 FOXO1Q12778 655 aa6.78□□□□□ -1.32
BRCA1-201ENST00000352993 PSRC1Q6PGN9 363 aaPredicted RBP6.78□□□□□ -1.32
BRCA1-201ENST00000352993 SLC22A25Q6T423 547 aa6.78□□□□□ -1.32
BRCA1-201ENST00000352993 DBX2Q6ZNG2 339 aa6.78□□□□□ -1.32
BRCA1-201ENST00000352993 KDF1Q8NAX2 398 aaPredicted RBP6.78□□□□□ -1.32
BRCA1-201ENST00000352993 OR51T1Q8NGJ9 327 aa6.78□□□□□ -1.32
BRCA1-201ENST00000352993 OR13G1Q8NGZ3 307 aa6.78□□□□□ -1.32
BRCA1-201ENST00000352993 OR2G3Q8NGZ4 309 aa6.78□□□□□ -1.32
BRCA1-201ENST00000352993 OR52N5Q8NH56 324 aa6.78□□□□□ -1.32
BRCA1-201ENST00000352993 HAS2Q92819 552 aa6.78□□□□□ -1.32
BRCA1-201ENST00000352993 PMM1Q92871 262 aa6.78□□□□□ -1.32
BRCA1-201ENST00000352993 REEP6Q96HR9 211 aa6.78□□□□□ -1.32
BRCA1-201ENST00000352993 OR2A5Q96R48 311 aa6.78□□□□□ -1.32
BRCA1-201ENST00000352993 RTBDNQ9BSG5 229 aaPredicted RBP6.78□□□□□ -1.32
BRCA1-201ENST00000352993 TMEM59Q9BXS4 323 aa6.78□□□□□ -1.32
BRCA1-201ENST00000352993 SIRT7Q9NRC8 400 aa6.78□□□□□ -1.32
BRCA1-201ENST00000352993 MRPL22Q9NWU5 206 aaKnown RBP6.78□□□□□ -1.32
BRCA1-201ENST00000352993 GDE1Q9NZC3 331 aa6.78□□□□□ -1.32
BRCA1-201ENST00000352993 R4GMQ9 66 aa6.78□□□□□ -1.32
BRCA1-201ENST00000352993 A0A1W2PP55 124 aa6.77□□□□□ -1.33
BRCA1-201ENST00000352993 PRSS37A4D1T9 235 aa6.77□□□□□ -1.33
BRCA1-201ENST00000352993 HSPB2A8KAH6 182 aa6.77□□□□□ -1.33
BRCA1-201ENST00000352993 LDLRAD4O15165 306 aa6.77□□□□□ -1.33
BRCA1-201ENST00000352993 SFTPCP11686 197 aa6.77□□□□□ -1.33
BRCA1-201ENST00000352993 FCARP24071 287 aa6.77□□□□□ -1.33
BRCA1-201ENST00000352993 CD226Q15762 336 aa6.77□□□□□ -1.33
BRCA1-201ENST00000352993 HSPB2Q16082 182 aa6.77□□□□□ -1.33
BRCA1-201ENST00000352993 ABCA11PQ4W5N1 156 aa6.77□□□□□ -1.33
BRCA1-201ENST00000352993 EMC4Q5J8M3 183 aa6.77□□□□□ -1.33
BRCA1-201ENST00000352993 C1orf100Q5SVJ3 147 aa6.77□□□□□ -1.33
BRCA1-201ENST00000352993 VITQ6UXI7 678 aa6.77□□□□□ -1.33
BRCA1-201ENST00000352993 CPEB2Q7Z5Q1 589 aaKnown RBP6.77□□□□□ -1.33
BRCA1-201ENST00000352993 METTL27Q8N6F8 245 aaPredicted RBP6.77□□□□□ -1.33
BRCA1-201ENST00000352993 BCORP1Q8N888 145 aa6.77□□□□□ -1.33
BRCA1-201ENST00000352993 OR5D14Q8NGL3 314 aa6.77□□□□□ -1.33
BRCA1-201ENST00000352993 WFIKKN2Q8TEU8 576 aa6.77□□□□□ -1.33
BRCA1-201ENST00000352993 SLC22A18Q96BI1 424 aa6.77□□□□□ -1.33
BRCA1-201ENST00000352993 DGAT2Q96PD7 388 aa6.77□□□□□ -1.33
BRCA1-201ENST00000352993 ZFYVE21Q9BQ24 234 aa6.77□□□□□ -1.33
BRCA1-201ENST00000352993 MRPL37Q9BZE1 423 aaKnown RBP6.77□□□□□ -1.33
BRCA1-201ENST00000352993 OR14J1Q9UGF5 321 aa6.77□□□□□ -1.33
BRCA1-201ENST00000352993 STRAPQ9Y3F4 350 aaKnown RBP6.77□□□□□ -1.33
BRCA1-201ENST00000352993 RFNGQ9Y644 331 aa6.77□□□□□ -1.33
BRCA1-201ENST00000352993 CCDC85CA6NKD9 419 aa6.77□□□□□ -1.33
BRCA1-201ENST00000352993 DEDDO75618 318 aa6.77□□□□□ -1.33
BRCA1-201ENST00000352993 SCGNO76038 276 aa6.77□□□□□ -1.33
BRCA1-201ENST00000352993 ZNF205O95201 554 aa6.77□□□□□ -1.33
BRCA1-201ENST00000352993 BPNT1O95861 308 aa6.77□□□□□ -1.33
BRCA1-201ENST00000352993 SEC11BP0C7V7 166 aa6.77□□□□□ -1.33
BRCA1-201ENST00000352993 IGFBP3P17936 291 aaPredicted RBP6.77□□□□□ -1.33
BRCA1-201ENST00000352993 APLNRP35414 380 aa6.77□□□□□ -1.33
BRCA1-201ENST00000352993 VIPR2P41587 438 aa6.77□□□□□ -1.33
BRCA1-201ENST00000352993 RAB38P57729 211 aa6.77□□□□□ -1.33
BRCA1-201ENST00000352993 FXYD4P59646 89 aa6.77□□□□□ -1.33
BRCA1-201ENST00000352993 NUTF2P61970 127 aaKnown RBP6.77□□□□□ -1.33
BRCA1-201ENST00000352993 CCL20P78556 96 aa6.77□□□□□ -1.33
BRCA1-201ENST00000352993 SPEM2Q0P670 501 aa6.77□□□□□ -1.33
BRCA1-201ENST00000352993 MGAT2Q10469 447 aa6.77□□□□□ -1.33
BRCA1-201ENST00000352993 LBHQ53QV2 105 aaPredicted RBP6.77□□□□□ -1.33
BRCA1-201ENST00000352993 C1orf87Q8N0U7 546 aa6.77□□□□□ -1.33
BRCA1-201ENST00000352993 FAM160A2Q8N612 972 aaPredicted RBP6.77□□□□□ -1.33
BRCA1-201ENST00000352993 LFNGQ8NES3 379 aa6.77□□□□□ -1.33
BRCA1-201ENST00000352993 TVP23CQ96ET8 276 aa6.77□□□□□ -1.33
BRCA1-201ENST00000352993 DDA1Q9BW61 102 aa6.77□□□□□ -1.33
BRCA1-201ENST00000352993 FOXQ1Q9C009 403 aa6.77□□□□□ -1.33
BRCA1-201ENST00000352993 PLEKHA2Q9HB19 425 aa6.77□□□□□ -1.33
BRCA1-201ENST00000352993 TBC1D29Q9UFV1 150 aa6.77□□□□□ -1.33
BRCA1-201ENST00000352993 TP53TG5Q9Y2B4 290 aa6.77□□□□□ -1.33
BRCA1-201ENST00000352993 A0A1B0GWJ7 208 aa6.77□□□□□ -1.33
BRCA1-201ENST00000352993 E5RGE8 158 aa6.77□□□□□ -1.33
BRCA1-201ENST00000352993 K7EQS6 105 aa6.77□□□□□ -1.33
BRCA1-201ENST00000352993 EREGO14944 169 aa6.77□□□□□ -1.33
BRCA1-201ENST00000352993 EML2O95834 649 aa6.77□□□□□ -1.33
BRCA1-201ENST00000352993 SLC2A1P11166 492 aa6.77□□□□□ -1.33
BRCA1-201ENST00000352993 LYL1P12980 280 aa6.77□□□□□ -1.33
BRCA1-201ENST00000352993 FOSL2P15408 326 aa6.77□□□□□ -1.33
BRCA1-201ENST00000352993 BTG2P78543 158 aa6.77□□□□□ -1.33
BRCA1-201ENST00000352993 CLEC12BQ2HXU8 276 aa6.77□□□□□ -1.33
BRCA1-201ENST00000352993 NPSR1Q6W5P4 371 aa6.77□□□□□ -1.33
BRCA1-201ENST00000352993 TMEM156Q8N614 296 aa6.77□□□□□ -1.33
BRCA1-201ENST00000352993 CYB561D1Q8N8Q1 229 aa6.77□□□□□ -1.33
BRCA1-201ENST00000352993 LRRC75AQ8NAA5 344 aa6.77□□□□□ -1.33
BRCA1-201ENST00000352993 ZNF248Q8NDW4 579 aa6.77□□□□□ -1.33
BRCA1-201ENST00000352993 OR14C36Q8NHC7 312 aa6.77□□□□□ -1.33
BRCA1-201ENST00000352993 NT5CQ8TCD5 201 aa6.77□□□□□ -1.33
BRCA1-201ENST00000352993 FAM3CQ92520 227 aa6.77□□□□□ -1.33
BRCA1-201ENST00000352993 RSC1A1Q92681 617 aa6.77□□□□□ -1.33
BRCA1-201ENST00000352993 EMG1Q92979 244 aaKnown RBP6.77□□□□□ -1.33
BRCA1-201ENST00000352993 ADAT3Q96EY9 351 aaPredicted RBP6.77□□□□□ -1.33
BRCA1-201ENST00000352993 FAM71F1Q96KD3 344 aaPredicted RBP6.77□□□□□ -1.33
BRCA1-201ENST00000352993 GAL3ST4Q96RP7 486 aa6.77□□□□□ -1.33
BRCA1-201ENST00000352993 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP6.77□□□□□ -1.33
BRCA1-201ENST00000352993 AK3Q9UIJ7 227 aa6.77□□□□□ -1.33
BRCA1-201ENST00000352993 HSF4Q9ULV5 492 aa6.77□□□□□ -1.33
BRCA1-201ENST00000352993 NSG2Q9Y328 171 aa6.77□□□□□ -1.33
BRCA1-201ENST00000352993 SEC16AO15027 2179 aa6.76□□□□□ -1.33
BRCA1-201ENST00000352993 PTPRSQ13332 1948 aa6.76□□□□□ -1.33
BRCA1-201ENST00000352993 KLF8O95600 359 aaPredicted RBP6.76□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms