RNA–Protein interactions for RNA: ENST00000351808.9

IFT88-202, Transcript of intraflagellar transport 88, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene IFT88, Length 2,856 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT88-202ENST00000351808 ICAM4Q14773 271 aa11.75□□□□□ -0.53
IFT88-202ENST00000351808 C1orf189Q5VU69 101 aa11.75□□□□□ -0.53
IFT88-202ENST00000351808 SGPP2Q8IWX5 399 aa11.75□□□□□ -0.53
IFT88-202ENST00000351808 C11orf42Q8N5U0 333 aa11.75□□□□□ -0.53
IFT88-202ENST00000351808 DTWD2Q8NBA8 298 aa11.75□□□□□ -0.53
IFT88-202ENST00000351808 OVCA2Q8WZ82 227 aa11.75□□□□□ -0.53
IFT88-202ENST00000351808 TSLPQ969D9 159 aa11.75□□□□□ -0.53
IFT88-202ENST00000351808 ZNF700Q9H0M5 742 aa11.75□□□□□ -0.53
IFT88-202ENST00000351808 MRPL22Q9NWU5 206 aaKnown RBP11.75□□□□□ -0.53
IFT88-202ENST00000351808 GAB2Q9UQC2 676 aa11.75□□□□□ -0.53
IFT88-202ENST00000351808 SDCBPO00560 298 aaPredicted RBP11.74□□□□□ -0.53
IFT88-202ENST00000351808 XRCC2O43543 280 aa11.74□□□□□ -0.53
IFT88-202ENST00000351808 DNASE1L1P49184 302 aa11.74□□□□□ -0.53
IFT88-202ENST00000351808 SLC37A1P57057 533 aa11.74□□□□□ -0.53
IFT88-202ENST00000351808 GPR18Q14330 331 aa11.74□□□□□ -0.53
IFT88-202ENST00000351808 SLC16A14Q7RTX9 510 aa11.74□□□□□ -0.53
IFT88-202ENST00000351808 ZFP62Q8NB50 900 aaPredicted RBP11.74□□□□□ -0.53
IFT88-202ENST00000351808 NOXO1Q8NFA2 376 aa11.74□□□□□ -0.53
IFT88-202ENST00000351808 DNASE2BQ8WZ79 361 aa11.74□□□□□ -0.53
IFT88-202ENST00000351808 THRSPQ92748 146 aa11.74□□□□□ -0.53
IFT88-202ENST00000351808 B9D1Q9UPM9 204 aa11.74□□□□□ -0.53
IFT88-202ENST00000351808 INSL5Q9Y5Q6 135 aa11.74□□□□□ -0.53
IFT88-202ENST00000351808 A0A1W2PPQ1 181 aa11.74□□□□□ -0.53
IFT88-202ENST00000351808 TCRBV21S2A2A0A5A6 115 aa11.74□□□□□ -0.53
IFT88-202ENST00000351808 B4E171 279 aa11.74□□□□□ -0.53
IFT88-202ENST00000351808 LMX1BO60663 402 aa11.74□□□□□ -0.53
IFT88-202ENST00000351808 HPRT1P00492 218 aa11.74□□□□□ -0.53
IFT88-202ENST00000351808 FPR2P25090 351 aa11.74□□□□□ -0.53
IFT88-202ENST00000351808 OR1D2P34982 312 aa11.74□□□□□ -0.53
IFT88-202ENST00000351808 TNFSF10P50591 281 aa11.74□□□□□ -0.53
IFT88-202ENST00000351808 RND2P52198 227 aa11.74□□□□□ -0.53
IFT88-202ENST00000351808 NTHL1P78549 312 aa11.74□□□□□ -0.53
IFT88-202ENST00000351808 MFGE8Q08431 387 aaPredicted RBP11.74□□□□□ -0.53
IFT88-202ENST00000351808 FZD2Q14332 565 aa11.74□□□□□ -0.53
IFT88-202ENST00000351808 Q6ZNB5 142 aa11.74□□□□□ -0.53
IFT88-202ENST00000351808 SLC25A26Q70HW3 274 aa11.74□□□□□ -0.53
IFT88-202ENST00000351808 P4HA3Q7Z4N8 544 aa11.74□□□□□ -0.53
IFT88-202ENST00000351808 FNDC9Q8TBE3 224 aa11.74□□□□□ -0.53
IFT88-202ENST00000351808 EXTL1Q92935 676 aa11.74□□□□□ -0.53
IFT88-202ENST00000351808 TMEM18Q96B42 140 aa11.74□□□□□ -0.53
IFT88-202ENST00000351808 C5orf34Q96MH7 638 aa11.74□□□□□ -0.53
IFT88-202ENST00000351808 CNTD2Q9H8S5 307 aa11.74□□□□□ -0.53
IFT88-202ENST00000351808 ABLIM3O94929 683 aa11.73□□□□□ -0.53
IFT88-202ENST00000351808 NSA2O95478 260 aaKnown RBP11.73□□□□□ -0.53
IFT88-202ENST00000351808 IL6RP08887 468 aaPredicted RBP11.73□□□□□ -0.53
IFT88-202ENST00000351808 MMP9P14780 707 aa11.73□□□□□ -0.53
IFT88-202ENST00000351808 CEACAM8P31997 349 aaPredicted RBP11.73□□□□□ -0.53
IFT88-202ENST00000351808 GPR3P46089 330 aa11.73□□□□□ -0.53
IFT88-202ENST00000351808 CTXN1P60606 82 aa11.73□□□□□ -0.53
IFT88-202ENST00000351808 BTN3A2P78410 334 aa11.73□□□□□ -0.53
IFT88-202ENST00000351808 FOXF1Q12946 379 aa11.73□□□□□ -0.53
IFT88-202ENST00000351808 SLC17A1Q14916 467 aa11.73□□□□□ -0.53
IFT88-202ENST00000351808 ZIC1Q15915 447 aa11.73□□□□□ -0.53
IFT88-202ENST00000351808 C1QL3Q5VWW1 255 aa11.73□□□□□ -0.53
IFT88-202ENST00000351808 Q7L0L9 218 aa11.73□□□□□ -0.53
IFT88-202ENST00000351808 KREMEN2Q8NCW0 462 aa11.73□□□□□ -0.53
IFT88-202ENST00000351808 TRIM2Q9C040 744 aa11.73□□□□□ -0.53
IFT88-202ENST00000351808 FKBP11Q9NYL4 201 aa11.73□□□□□ -0.53
IFT88-202ENST00000351808 DOCK9Q9BZ29 2069 aa11.73□□□□□ -0.53
IFT88-202ENST00000351808 TRBV24-1A0A075B6N3 115 aa11.73□□□□□ -0.53
IFT88-202ENST00000351808 PLRG1O43660 514 aaKnown RBP11.73□□□□□ -0.53
IFT88-202ENST00000351808 RPLP2P05387 115 aaKnown RBP11.73□□□□□ -0.53
IFT88-202ENST00000351808 JMJD7P0C870 316 aa11.73□□□□□ -0.53
IFT88-202ENST00000351808 ERGP11308 486 aa11.73□□□□□ -0.53
IFT88-202ENST00000351808 COA6Q5JTJ3 125 aaKnown RBP11.73□□□□□ -0.53
IFT88-202ENST00000351808 CLEC2AQ6UVW9 174 aa11.73□□□□□ -0.53
IFT88-202ENST00000351808 LINC00114Q6XXX2 140 aa11.73□□□□□ -0.53
IFT88-202ENST00000351808 ZNF66Q6ZN08 573 aa11.73□□□□□ -0.53
IFT88-202ENST00000351808 SSX7Q7RTT5 188 aa11.73□□□□□ -0.53
IFT88-202ENST00000351808 ADIPOR2Q86V24 386 aa11.73□□□□□ -0.53
IFT88-202ENST00000351808 MRPL24Q96A35 216 aaKnown RBP11.73□□□□□ -0.53
IFT88-202ENST00000351808 SERINC1Q9NRX5 453 aa11.73□□□□□ -0.53
IFT88-202ENST00000351808 FOXJ2Q9P0K8 574 aa11.73□□□□□ -0.53
IFT88-202ENST00000351808 APOBEC3BQ9UH17 382 aaKnown RBP11.73□□□□□ -0.53
IFT88-202ENST00000351808 ZBTB32Q9Y2Y4 487 aaPredicted RBP11.73□□□□□ -0.53
IFT88-202ENST00000351808 SNRNP200O75643 2136 aaKnown RBP11.73□□□□□ -0.53
IFT88-202ENST00000351808 LNP1A1A4G5 178 aa11.73□□□□□ -0.53
IFT88-202ENST00000351808 GRXCR1A8MXD5 290 aa11.73□□□□□ -0.53
IFT88-202ENST00000351808 NXPH2O95156 264 aa11.73□□□□□ -0.53
IFT88-202ENST00000351808 GABRA3P34903 492 aa11.73□□□□□ -0.53
IFT88-202ENST00000351808 RBMXP38159 391 aaKnown RBP11.73□□□□□ -0.53
IFT88-202ENST00000351808 WNT5AP41221 380 aa11.73□□□□□ -0.53
IFT88-202ENST00000351808 HSF1Q00613 529 aa11.73□□□□□ -0.53
IFT88-202ENST00000351808 KCNMB1Q16558 191 aa11.73□□□□□ -0.53
IFT88-202ENST00000351808 ITPRIPL2Q3MIP1 535 aa11.73□□□□□ -0.53
IFT88-202ENST00000351808 C1orf100Q5SVJ3 147 aa11.73□□□□□ -0.53
IFT88-202ENST00000351808 WDR25Q64LD2 544 aaPredicted RBP11.73□□□□□ -0.53
IFT88-202ENST00000351808 ZNF100Q8IYN0 542 aa11.73□□□□□ -0.53
IFT88-202ENST00000351808 C10orf53Q8N6V4 93 aa11.73□□□□□ -0.53
IFT88-202ENST00000351808 OR52N4Q8NGI2 321 aa11.73□□□□□ -0.53
IFT88-202ENST00000351808 OR13G1Q8NGZ3 307 aa11.73□□□□□ -0.53
IFT88-202ENST00000351808 HAS2Q92819 552 aa11.73□□□□□ -0.53
IFT88-202ENST00000351808 PTX4Q96A99 478 aa11.73□□□□□ -0.53
IFT88-202ENST00000351808 NICN1Q9BSH3 213 aa11.73□□□□□ -0.53
IFT88-202ENST00000351808 OR2J1Q9GZK6 312 aa11.73□□□□□ -0.53
IFT88-202ENST00000351808 PCBD2Q9H0N5 130 aa11.73□□□□□ -0.53
IFT88-202ENST00000351808 TCFL5Q9UL49 500 aa11.73□□□□□ -0.53
IFT88-202ENST00000351808 CEACAM18A8MTB9 384 aa11.72□□□□□ -0.53
IFT88-202ENST00000351808 ZNF705FA8MVS1 300 aaPredicted RBP11.72□□□□□ -0.53
IFT88-202ENST00000351808 LCATP04180 440 aa11.72□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms