RNA–Protein interactions for RNA: ENST00000344548.7

CDC42-202, Transcript of cell division cycle 42, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CDC42, Length 2,256 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42-202ENST00000344548 MARVELD1Q9BSK0 173 aa11.72□□□□□ -0.53
CDC42-202ENST00000344548 REPIN1Q9BWE0 567 aaKnown RBP11.72□□□□□ -0.53
CDC42-202ENST00000344548 FGF23Q9GZV9 251 aaPredicted RBP11.72□□□□□ -0.53
CDC42-202ENST00000344548 ZNF581Q9P0T4 197 aa11.72□□□□□ -0.53
CDC42-202ENST00000344548 RAB22AQ9UL26 194 aa11.72□□□□□ -0.53
CDC42-202ENST00000344548 TRAV6A0A075B6T7 132 aa11.72□□□□□ -0.53
CDC42-202ENST00000344548 ANKRD20A5PA0PJZ0 165 aa11.72□□□□□ -0.53
CDC42-202ENST00000344548 H7C417 338 aa11.72□□□□□ -0.53
CDC42-202ENST00000344548 SPRY1O43609 319 aaPredicted RBP11.72□□□□□ -0.53
CDC42-202ENST00000344548 CDC14BO60729 498 aa11.72□□□□□ -0.53
CDC42-202ENST00000344548 SERPINA5P05154 406 aa11.72□□□□□ -0.53
CDC42-202ENST00000344548 RAB6AP20340 208 aa11.72□□□□□ -0.53
CDC42-202ENST00000344548 ATRXP46100 2492 aa11.72□□□□□ -0.53
CDC42-202ENST00000344548 PLAC9Q5JTB6 97 aa11.72□□□□□ -0.53
CDC42-202ENST00000344548 NCCRP1Q6ZVX7 275 aaPredicted RBP11.72□□□□□ -0.53
CDC42-202ENST00000344548 OR56B2PQ8NGI1 322 aa11.72□□□□□ -0.53
CDC42-202ENST00000344548 OR6K3Q8NGY3 331 aa11.72□□□□□ -0.53
CDC42-202ENST00000344548 PIGCQ92535 297 aa11.72□□□□□ -0.53
CDC42-202ENST00000344548 PTX4Q96A99 478 aa11.72□□□□□ -0.53
CDC42-202ENST00000344548 PHF21AQ96BD5 680 aa11.72□□□□□ -0.53
CDC42-202ENST00000344548 PLSCR4Q9NRQ2 329 aa11.72□□□□□ -0.53
CDC42-202ENST00000344548 PTTG3PQ9NZH4 202 aa11.72□□□□□ -0.53
CDC42-202ENST00000344548 MTFP1Q9UDX5 166 aa11.72□□□□□ -0.53
CDC42-202ENST00000344548 KCNK7Q9Y2U2 307 aa11.72□□□□□ -0.53
CDC42-202ENST00000344548 RRP8O43159 456 aaKnown RBP11.71□□□□□ -0.53
CDC42-202ENST00000344548 ALX3O95076 343 aa11.71□□□□□ -0.53
CDC42-202ENST00000344548 NRASP01111 189 aa11.71□□□□□ -0.53
CDC42-202ENST00000344548 GNB3P16520 340 aa11.71□□□□□ -0.53
CDC42-202ENST00000344548 TDGF1P3P51864 188 aa11.71□□□□□ -0.53
CDC42-202ENST00000344548 MTCP1P56278 107 aa11.71□□□□□ -0.53
CDC42-202ENST00000344548 TMEM50BP56557 158 aa11.71□□□□□ -0.53
CDC42-202ENST00000344548 PER3P56645 1201 aa11.71□□□□□ -0.53
CDC42-202ENST00000344548 ZP1P60852 638 aa11.71□□□□□ -0.53
CDC42-202ENST00000344548 TATDN3Q17R31 274 aa11.71□□□□□ -0.53
CDC42-202ENST00000344548 ZNF260Q3ZCT1 412 aa11.71□□□□□ -0.53
CDC42-202ENST00000344548 SPATA46Q5T0L3 261 aa11.71□□□□□ -0.53
CDC42-202ENST00000344548 AGAP6Q5VW22 663 aa11.71□□□□□ -0.53
CDC42-202ENST00000344548 RSBN1Q5VWQ0 802 aaPredicted RBP11.71□□□□□ -0.53
CDC42-202ENST00000344548 TMEM53Q6P2H8 277 aa11.71□□□□□ -0.53
CDC42-202ENST00000344548 WDR31Q8NA23 367 aa11.71□□□□□ -0.53
CDC42-202ENST00000344548 GPX8Q8TED1 209 aa11.71□□□□□ -0.53
CDC42-202ENST00000344548 TNFAIP8L1Q8WVP5 186 aa11.71□□□□□ -0.53
CDC42-202ENST00000344548 C10orf35Q96D05 121 aa11.71□□□□□ -0.53
CDC42-202ENST00000344548 GPR160Q9UJ42 338 aa11.71□□□□□ -0.53
CDC42-202ENST00000344548 DHRS7CA6NNS2 312 aa11.71□□□□□ -0.54
CDC42-202ENST00000344548 ZNF850A8MQ14 1090 aa11.71□□□□□ -0.54
CDC42-202ENST00000344548 XRCC2O43543 280 aa11.71□□□□□ -0.54
CDC42-202ENST00000344548 CRYABP02511 175 aaKnown RBP11.71□□□□□ -0.54
CDC42-202ENST00000344548 COX5AP20674 150 aa11.71□□□□□ -0.54
CDC42-202ENST00000344548 PRSS3P35030 304 aa11.71□□□□□ -0.54
CDC42-202ENST00000344548 IDH3GP51553 393 aaPredicted RBP11.71□□□□□ -0.54
CDC42-202ENST00000344548 ERVS71-1P61550 626 aa11.71□□□□□ -0.54
CDC42-202ENST00000344548 CXADRP78310 365 aa11.71□□□□□ -0.54
CDC42-202ENST00000344548 PLP2Q04941 152 aa11.71□□□□□ -0.54
CDC42-202ENST00000344548 LINC00303Q3SY05 128 aa11.71□□□□□ -0.54
CDC42-202ENST00000344548 HACD4Q5VWC8 232 aa11.71□□□□□ -0.54
CDC42-202ENST00000344548 CXorf67Q86X51 503 aaPredicted RBP11.71□□□□□ -0.54
CDC42-202ENST00000344548 CDH26Q8IXH8 852 aa11.71□□□□□ -0.54
CDC42-202ENST00000344548 BHLHE23Q8NDY6 225 aa11.71□□□□□ -0.54
CDC42-202ENST00000344548 SLC30A7Q8NEW0 376 aa11.71□□□□□ -0.54
CDC42-202ENST00000344548 WBP1Q96G27 269 aa11.71□□□□□ -0.54
CDC42-202ENST00000344548 CACNG6Q9BXT2 260 aa11.71□□□□□ -0.54
CDC42-202ENST00000344548 SELENOIQ9C0D9 397 aa11.71□□□□□ -0.54
CDC42-202ENST00000344548 RGCCQ9H4X1 137 aa11.71□□□□□ -0.54
CDC42-202ENST00000344548 NUDT15Q9NV35 164 aa11.71□□□□□ -0.54
CDC42-202ENST00000344548 ING4Q9UNL4 249 aa11.71□□□□□ -0.54
CDC42-202ENST00000344548 FLVCR2Q9UPI3 526 aa11.71□□□□□ -0.54
CDC42-202ENST00000344548 IGKV1-12A0A0C4DH73 117 aa11.7□□□□□ -0.54
CDC42-202ENST00000344548 A8MV72 311 aaPredicted RBP11.7□□□□□ -0.54
CDC42-202ENST00000344548 CRTAPO75718 401 aaPredicted RBP11.7□□□□□ -0.54
CDC42-202ENST00000344548 IGKV1D-12P01611 117 aa11.7□□□□□ -0.54
CDC42-202ENST00000344548 TCRBP04435 133 aa11.7□□□□□ -0.54
CDC42-202ENST00000344548 DYRK1AQ13627 763 aa11.7□□□□□ -0.54
CDC42-202ENST00000344548 PCGF3Q3KNV8 242 aa11.7□□□□□ -0.54
CDC42-202ENST00000344548 CLVS2Q5SYC1 327 aa11.7□□□□□ -0.54
CDC42-202ENST00000344548 FAM180AQ6UWF9 173 aa11.7□□□□□ -0.54
CDC42-202ENST00000344548 MOB3CQ70IA8 216 aa11.7□□□□□ -0.54
CDC42-202ENST00000344548 CHST4Q8NCG5 386 aa11.7□□□□□ -0.54
CDC42-202ENST00000344548 AQP3Q92482 292 aa11.7□□□□□ -0.54
CDC42-202ENST00000344548 APOBEC3DQ96AK3 386 aaPredicted RBP11.7□□□□□ -0.54
CDC42-202ENST00000344548 CCDC120Q96HB5 630 aa11.7□□□□□ -0.54
CDC42-202ENST00000344548 FBLN5Q9UBX5 448 aa11.7□□□□□ -0.54
CDC42-202ENST00000344548 PCNX1Q96RV3 2341 aa11.7□□□□□ -0.54
CDC42-202ENST00000344548 C3orf80F5H4A9 247 aa11.7□□□□□ -0.54
CDC42-202ENST00000344548 RBBP9O75884 186 aa11.7□□□□□ -0.54
CDC42-202ENST00000344548 SERPINA2P20848 420 aa11.7□□□□□ -0.54
CDC42-202ENST00000344548 APLNRP35414 380 aa11.7□□□□□ -0.54
CDC42-202ENST00000344548 MRPS10P82664 201 aaKnown RBP11.7□□□□□ -0.54
CDC42-202ENST00000344548 CDNFQ49AH0 187 aa11.7□□□□□ -0.54
CDC42-202ENST00000344548 OR2A2Q6IF42 318 aa11.7□□□□□ -0.54
CDC42-202ENST00000344548 Q6ZTK2 550 aa11.7□□□□□ -0.54
CDC42-202ENST00000344548 CALHM1Q8IU99 346 aa11.7□□□□□ -0.54
CDC42-202ENST00000344548 BATF2Q8N1L9 274 aa11.7□□□□□ -0.54
CDC42-202ENST00000344548 GVQW1Q8N7I0 195 aa11.7□□□□□ -0.54
CDC42-202ENST00000344548 OR8S1Q8NH09 359 aa11.7□□□□□ -0.54
CDC42-202ENST00000344548 CHAC2Q8WUX2 184 aa11.7□□□□□ -0.54
CDC42-202ENST00000344548 NUDCD2Q8WVJ2 157 aa11.7□□□□□ -0.54
CDC42-202ENST00000344548 AKAP1Q92667 903 aaKnown RBP eCLIP11.7□□□□□ -0.54
CDC42-202ENST00000344548 SNRNP40Q96DI7 357 aaKnown RBP11.7□□□□□ -0.54
CDC42-202ENST00000344548 RABL2AQ9UBK7 228 aaPredicted RBP11.7□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms