RNA–Protein interactions for RNA: ENST00000344113.8

SYNE2-202, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SYNE2, Length 21,777 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-202ENST00000344113 ONECUT2O95948 504 aa3.41□□□□□ -1.86
SYNE2-202ENST00000344113 ISG15P05161 165 aa3.41□□□□□ -1.86
SYNE2-202ENST00000344113 PDLIM4P50479 330 aa3.41□□□□□ -1.86
SYNE2-202ENST00000344113 AMZ2Q86W34 360 aa3.41□□□□□ -1.86
SYNE2-202ENST00000344113 Q9N2J8 555 aa3.41□□□□□ -1.86
SYNE2-202ENST00000344113 OR4C46A6NHA9 309 aa3.41□□□□□ -1.86
SYNE2-202ENST00000344113 GOT1P17174 413 aa3.41□□□□□ -1.86
SYNE2-202ENST00000344113 TGFBR1P36897 503 aa3.41□□□□□ -1.86
SYNE2-202ENST00000344113 PPP2CBP62714 309 aa3.41□□□□□ -1.86
SYNE2-202ENST00000344113 AESQ08117 197 aa3.41□□□□□ -1.86
SYNE2-202ENST00000344113 SLC25A52Q3SY17 297 aa3.41□□□□□ -1.86
SYNE2-202ENST00000344113 POM121L1PQ3SYA9 428 aa3.41□□□□□ -1.86
SYNE2-202ENST00000344113 SIAH3Q8IW03 269 aa3.41□□□□□ -1.86
SYNE2-202ENST00000344113 RXFP4Q8TDU9 374 aa3.41□□□□□ -1.86
SYNE2-202ENST00000344113 RCC1LQ96I51 464 aaKnown RBP3.41□□□□□ -1.86
SYNE2-202ENST00000344113 C4orf47A7E2U8 309 aa3.41□□□□□ -1.86
SYNE2-202ENST00000344113 SYT5O00445 386 aa3.41□□□□□ -1.86
SYNE2-202ENST00000344113 IL10RAQ13651 578 aa3.41□□□□□ -1.86
SYNE2-202ENST00000344113 C2orf50Q96LR7 162 aa3.41□□□□□ -1.86
SYNE2-202ENST00000344113 ZDHHC3Q9NYG2 299 aa3.41□□□□□ -1.86
SYNE2-202ENST00000344113 EHFQ9NZC4 300 aa3.41□□□□□ -1.86
SYNE2-202ENST00000344113 KIAA1456Q9P272 454 aa3.41□□□□□ -1.86
SYNE2-202ENST00000344113 PRLHRP49683 370 aa3.41□□□□□ -1.86
SYNE2-202ENST00000344113 SNRPD1P62314 119 aaKnown RBP3.41□□□□□ -1.86
SYNE2-202ENST00000344113 OR9A2Q8NGT5 310 aa3.41□□□□□ -1.86
SYNE2-202ENST00000344113 OR2A5Q96R48 311 aa3.41□□□□□ -1.86
SYNE2-202ENST00000344113 FGF21Q9NSA1 209 aa3.41□□□□□ -1.86
SYNE2-202ENST00000344113 CCL27Q9Y4X3 112 aa3.41□□□□□ -1.86
SYNE2-202ENST00000344113 PLPP2O43688 288 aa3.41□□□□□ -1.86
SYNE2-202ENST00000344113 IL18BPO95998 194 aa3.41□□□□□ -1.86
SYNE2-202ENST00000344113 CA1P00915 261 aaPredicted RBP3.41□□□□□ -1.86
SYNE2-202ENST00000344113 PPIAP62937 165 aaKnown RBP3.41□□□□□ -1.86
SYNE2-202ENST00000344113 MIDNQ504T8 468 aa3.41□□□□□ -1.86
SYNE2-202ENST00000344113 OR52E1Q8NGJ3 308 aa3.41□□□□□ -1.86
SYNE2-202ENST00000344113 GPR150Q8NGU9 434 aa3.41□□□□□ -1.86
SYNE2-202ENST00000344113 PPP1R1CQ8WVI7 109 aa3.41□□□□□ -1.86
SYNE2-202ENST00000344113 TM4SF18Q96CE8 201 aa3.41□□□□□ -1.86
SYNE2-202ENST00000344113 BARHL1Q9BZE3 327 aa3.41□□□□□ -1.86
SYNE2-202ENST00000344113 TMEM38AQ9H6F2 299 aa3.41□□□□□ -1.86
SYNE2-202ENST00000344113 GPR32O75388 356 aa3.41□□□□□ -1.86
SYNE2-202ENST00000344113 ZNF17P17021 662 aa3.41□□□□□ -1.86
SYNE2-202ENST00000344113 TMEM258P61165 79 aa3.41□□□□□ -1.86
SYNE2-202ENST00000344113 CATSPEREQ5SY80 951 aa3.41□□□□□ -1.86
SYNE2-202ENST00000344113 PODNL1Q6PEZ8 512 aa3.41□□□□□ -1.86
SYNE2-202ENST00000344113 OR2AK2Q8NG84 335 aa3.41□□□□□ -1.86
SYNE2-202ENST00000344113 PRR11Q96HE9 360 aaPredicted RBP3.41□□□□□ -1.86
SYNE2-202ENST00000344113 ABHD16BQ9H3Z7 469 aa3.41□□□□□ -1.86
SYNE2-202ENST00000344113 RBKSQ9H477 322 aa3.41□□□□□ -1.86
SYNE2-202ENST00000344113 PI4KAP42356 2102 aa3.41□□□□□ -1.86
SYNE2-202ENST00000344113 NKX2-1P43699 371 aaPredicted RBP3.41□□□□□ -1.86
SYNE2-202ENST00000344113 DEFB128Q7Z7B8 93 aa3.41□□□□□ -1.86
SYNE2-202ENST00000344113 LDLRAD3Q86YD5 345 aa3.41□□□□□ -1.86
SYNE2-202ENST00000344113 NKX2-4Q9H2Z4 354 aa3.41□□□□□ -1.86
SYNE2-202ENST00000344113 NECAP2Q9NVZ3 263 aa3.41□□□□□ -1.86
SYNE2-202ENST00000344113 HCFC1R1Q9NWW0 138 aa3.41□□□□□ -1.86
SYNE2-202ENST00000344113 GPX2P18283 190 aa3.41□□□□□ -1.86
SYNE2-202ENST00000344113 GAGE5Q13069 117 aa3.41□□□□□ -1.86
SYNE2-202ENST00000344113 GAGE6Q13070 117 aa3.41□□□□□ -1.86
SYNE2-202ENST00000344113 ELOCQ15369 112 aa3.41□□□□□ -1.86
SYNE2-202ENST00000344113 RNASE12Q5GAN4 147 aaKnown RBP3.41□□□□□ -1.86
SYNE2-202ENST00000344113 ADGRE4PQ86SQ3 457 aa3.41□□□□□ -1.86
SYNE2-202ENST00000344113 WDFY1Q8IWB7 410 aa3.41□□□□□ -1.86
SYNE2-202ENST00000344113 C5orf30Q96GV9 206 aa3.41□□□□□ -1.86
SYNE2-202ENST00000344113 S1PR3Q99500 378 aa3.41□□□□□ -1.86
SYNE2-202ENST00000344113 MAP3K4Q9Y6R4 1608 aa3.41□□□□□ -1.86
SYNE2-202ENST00000344113 NID1P14543 1247 aa3.41□□□□□ -1.86
SYNE2-202ENST00000344113 MMP9P14780 707 aa3.41□□□□□ -1.86
SYNE2-202ENST00000344113 IL2RBP14784 551 aa3.41□□□□□ -1.86
SYNE2-202ENST00000344113 MPGP29372 298 aa3.41□□□□□ -1.86
SYNE2-202ENST00000344113 ACVR1Q04771 509 aa3.41□□□□□ -1.86
SYNE2-202ENST00000344113 EIF3IQ13347 325 aaKnown RBP3.41□□□□□ -1.86
SYNE2-202ENST00000344113 C5orf64Q2M2E5 130 aa3.41□□□□□ -1.86
SYNE2-202ENST00000344113 OLIG3Q7RTU3 272 aa3.41□□□□□ -1.86
SYNE2-202ENST00000344113 CA13Q8N1Q1 262 aa3.41□□□□□ -1.86
SYNE2-202ENST00000344113 SP7Q8TDD2 431 aaPredicted RBP3.41□□□□□ -1.86
SYNE2-202ENST00000344113 ZNF681Q96N22 645 aa3.41□□□□□ -1.86
SYNE2-202ENST00000344113 B4GALT2O60909 372 aa3.4□□□□□ -1.86
SYNE2-202ENST00000344113 CTAG2O75638 210 aa3.4□□□□□ -1.86
SYNE2-202ENST00000344113 HIST1H1EP10412 219 aaKnown RBP3.4□□□□□ -1.86
SYNE2-202ENST00000344113 PCBP2Q15366 365 aaKnown RBP eCLIP3.4□□□□□ -1.862e-7■■■■■ 39.1
SYNE2-202ENST00000344113 LINC00052Q96N35 136 aa3.4□□□□□ -1.86
SYNE2-202ENST00000344113 ARHGAP32A7KAX9 2087 aa3.4□□□□□ -1.86
SYNE2-202ENST00000344113 PAPLNO95428 1278 aa3.4□□□□□ -1.86
SYNE2-202ENST00000344113 SLC37A1P57057 533 aa3.4□□□□□ -1.86
SYNE2-202ENST00000344113 IL13RA2Q14627 380 aa3.4□□□□□ -1.86
SYNE2-202ENST00000344113 ZC3H13Q5T200 1668 aaKnown RBP3.4□□□□□ -1.86
SYNE2-202ENST00000344113 GJB7Q6PEY0 223 aa3.4□□□□□ -1.86
SYNE2-202ENST00000344113 PUSL1Q8N0Z8 303 aaKnown RBP3.4□□□□□ -1.86
SYNE2-202ENST00000344113 RHBDD1Q8TEB9 315 aa3.4□□□□□ -1.86
SYNE2-202ENST00000344113 ZNF764Q96H86 408 aaPredicted RBP3.4□□□□□ -1.86
SYNE2-202ENST00000344113 ABHD6Q9BV23 337 aa3.4□□□□□ -1.86
SYNE2-202ENST00000344113 PRRG4Q9BZD6 226 aa3.4□□□□□ -1.86
SYNE2-202ENST00000344113 OR10A2Q9H208 303 aa3.4□□□□□ -1.86
SYNE2-202ENST00000344113 RIMS4Q9H426 269 aaPredicted RBP3.4□□□□□ -1.86
SYNE2-202ENST00000344113 A0A1W2PP11 408 aa3.4□□□□□ -1.86
SYNE2-202ENST00000344113 PLAUP00749 431 aa3.4□□□□□ -1.86
SYNE2-202ENST00000344113 ZMYND19Q96E35 227 aaPredicted RBP3.4□□□□□ -1.86
SYNE2-202ENST00000344113 SEMA3CQ99985 751 aa3.4□□□□□ -1.86
SYNE2-202ENST00000344113 SMG9Q9H0W8 520 aaKnown RBP3.4□□□□□ -1.86
SYNE2-202ENST00000344113 SLC19A1P41440 591 aa3.4□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 53.6 ms