RNA–Protein interactions for RNA: ENST00000343916.7

COL9A3-201, Transcript of collagen type IX alpha 3 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL9A3, Length 2,485 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A3-201ENST00000343916 RPA2P15927 270 aa16.96■□□□□ 0.31
COL9A3-201ENST00000343916 SERPINA2P20848 420 aa16.96■□□□□ 0.31
COL9A3-201ENST00000343916 MPZP25189 248 aa16.96■□□□□ 0.31
COL9A3-201ENST00000343916 SIGLEC14Q08ET2 396 aa16.96■□□□□ 0.31
COL9A3-201ENST00000343916 ZC3HAV1Q7Z2W4 902 aaKnown RBP16.96■□□□□ 0.31
COL9A3-201ENST00000343916 ZDHHC22Q8N966 263 aa16.96■□□□□ 0.31
COL9A3-201ENST00000343916 OR51T1Q8NGJ9 327 aa16.96■□□□□ 0.31
COL9A3-201ENST00000343916 RHBDD1Q8TEB9 315 aa16.96■□□□□ 0.31
COL9A3-201ENST00000343916 ALKBH3Q96Q83 286 aaPredicted RBP16.96■□□□□ 0.31
COL9A3-201ENST00000343916 MICU1Q9BPX6 476 aa16.96■□□□□ 0.31
COL9A3-201ENST00000343916 CRLF2Q9HC73 371 aa16.96■□□□□ 0.31
COL9A3-201ENST00000343916 PATE4P0C8F1 98 aa16.96■□□□□ 0.31
COL9A3-201ENST00000343916 OTX1P32242 354 aaPredicted RBP16.96■□□□□ 0.31
COL9A3-201ENST00000343916 SUCLG1P53597 346 aaKnown RBP16.96■□□□□ 0.31
COL9A3-201ENST00000343916 ZMYND11Q15326 602 aa16.96■□□□□ 0.31
COL9A3-201ENST00000343916 KCTD9Q7L273 389 aa16.96■□□□□ 0.31
COL9A3-201ENST00000343916 OVCH2Q7RTZ1 564 aa16.96■□□□□ 0.31
COL9A3-201ENST00000343916 C20orf196Q8IYI0 205 aa16.96■□□□□ 0.31
COL9A3-201ENST00000343916 ESX1Q8N693 406 aa16.96■□□□□ 0.31
COL9A3-201ENST00000343916 PNLDC1Q8NA58 520 aaKnown RBP16.96■□□□□ 0.31
COL9A3-201ENST00000343916 OR2AE1Q8NHA4 323 aa16.96■□□□□ 0.31
COL9A3-201ENST00000343916 MAFIPQ8WZ33 124 aa16.96■□□□□ 0.31
COL9A3-201ENST00000343916 DEPPQ9NTK1 212 aa16.96■□□□□ 0.31
COL9A3-201ENST00000343916 LOXL2Q9Y4K0 774 aa16.96■□□□□ 0.31
COL9A3-201ENST00000343916 CCDC187A0A096LP49 1063 aa16.95■□□□□ 0.3
COL9A3-201ENST00000343916 A0A0U1RQV5 110 aa16.95■□□□□ 0.3
COL9A3-201ENST00000343916 A8MXK9 166 aa16.95■□□□□ 0.3
COL9A3-201ENST00000343916 EFSO43281 561 aa16.95■□□□□ 0.3
COL9A3-201ENST00000343916 TRAPPC6AO75865 159 aa16.95■□□□□ 0.3
COL9A3-201ENST00000343916 CD8AP01732 235 aa16.95■□□□□ 0.3
COL9A3-201ENST00000343916 GSTP1P09211 210 aaKnown RBP16.95■□□□□ 0.3
COL9A3-201ENST00000343916 FCGR2AP12318 317 aa16.95■□□□□ 0.3
COL9A3-201ENST00000343916 ZNF84P51523 738 aa16.95■□□□□ 0.3
COL9A3-201ENST00000343916 RAC3P60763 192 aa16.95■□□□□ 0.3
COL9A3-201ENST00000343916 HIST1H3AP68431 136 aa16.95■□□□□ 0.3
COL9A3-201ENST00000343916 ARFRP1Q13795 201 aa16.95■□□□□ 0.3
COL9A3-201ENST00000343916 GK2Q14410 553 aaPredicted RBP16.95■□□□□ 0.3
COL9A3-201ENST00000343916 ATXN7L3Q14CW9 347 aaPredicted RBP16.95■□□□□ 0.3
COL9A3-201ENST00000343916 WIPI1Q5MNZ9 446 aaPredicted RBP16.95■□□□□ 0.3
COL9A3-201ENST00000343916 HIST2H3PS2Q5TEC6 136 aa16.95■□□□□ 0.3
COL9A3-201ENST00000343916 HIST2H3AQ71DI3 136 aa16.95■□□□□ 0.3
COL9A3-201ENST00000343916 GGNQ86UU5 652 aa16.95■□□□□ 0.3
COL9A3-201ENST00000343916 OR56B1Q8NGI3 324 aa16.95■□□□□ 0.3
COL9A3-201ENST00000343916 PPP1R1CQ8WVI7 109 aa16.95■□□□□ 0.3
COL9A3-201ENST00000343916 FBXW5Q969U6 566 aa16.95■□□□□ 0.3
COL9A3-201ENST00000343916 OR10A2Q9H208 303 aa16.95■□□□□ 0.3
COL9A3-201ENST00000343916 ZC4H2Q9NQZ6 224 aa16.95■□□□□ 0.3
COL9A3-201ENST00000343916 V9GYS6 101 aa16.95■□□□□ 0.3
COL9A3-201ENST00000343916 DOCK10Q96BY6 2186 aa16.95■□□□□ 0.3
COL9A3-201ENST00000343916 MFNGO00587 321 aa16.95■□□□□ 0.3
COL9A3-201ENST00000343916 CXCL13O43927 109 aa16.95■□□□□ 0.3
COL9A3-201ENST00000343916 SNAPC5O75971 98 aa16.95■□□□□ 0.3
COL9A3-201ENST00000343916 PRF1P14222 555 aa16.95■□□□□ 0.3
COL9A3-201ENST00000343916 MGMTP16455 207 aa16.95■□□□□ 0.3
COL9A3-201ENST00000343916 MPGP29372 298 aa16.95■□□□□ 0.3
COL9A3-201ENST00000343916 SRD5A2P31213 254 aa16.95■□□□□ 0.3
COL9A3-201ENST00000343916 CARD18P57730 90 aa16.95■□□□□ 0.3
COL9A3-201ENST00000343916 ZNF660Q6AZW8 331 aaPredicted RBP16.95■□□□□ 0.3
COL9A3-201ENST00000343916 IQCF2Q8IXL9 164 aa16.95■□□□□ 0.3
COL9A3-201ENST00000343916 ARMC10Q8N2F6 343 aa16.95■□□□□ 0.3
COL9A3-201ENST00000343916 CT55Q8WUE5 264 aa16.95■□□□□ 0.3
COL9A3-201ENST00000343916 MITD1Q8WV92 249 aa16.95■□□□□ 0.3
COL9A3-201ENST00000343916 URM1Q9BTM9 101 aaKnown RBP16.95■□□□□ 0.3
COL9A3-201ENST00000343916 ST6GALNAC5Q9BVH7 336 aa16.95■□□□□ 0.3
COL9A3-201ENST00000343916 ELL3Q9HB65 397 aaPredicted RBP16.95■□□□□ 0.3
COL9A3-201ENST00000343916 FLVCR1Q9Y5Y0 555 aa16.95■□□□□ 0.3
COL9A3-201ENST00000343916 PCSK5Q92824 1860 aa16.94■□□□□ 0.3
COL9A3-201ENST00000343916 LRRC3CA6NJW4 275 aa16.94■□□□□ 0.3
COL9A3-201ENST00000343916 KRBOX1C9JBD0 128 aa16.94■□□□□ 0.3
COL9A3-201ENST00000343916 IL2RAP01589 272 aa16.94■□□□□ 0.3
COL9A3-201ENST00000343916 NPY4RP50391 375 aa16.94■□□□□ 0.3
COL9A3-201ENST00000343916 BEX5Q5H9J7 111 aa16.94■□□□□ 0.3
COL9A3-201ENST00000343916 ACER2Q5QJU3 275 aa16.94■□□□□ 0.3
COL9A3-201ENST00000343916 FAM122CQ6P4D5 195 aa16.94■□□□□ 0.3
COL9A3-201ENST00000343916 OR1S1Q8NH92 325 aa16.94■□□□□ 0.3
COL9A3-201ENST00000343916 ASB13Q8WXK3 278 aa16.94■□□□□ 0.3
COL9A3-201ENST00000343916 CHST5Q9GZS9 411 aa16.94■□□□□ 0.3
COL9A3-201ENST00000343916 MED9Q9NWA0 146 aa16.94■□□□□ 0.3
COL9A3-201ENST00000343916 GPR160Q9UJ42 338 aa16.94■□□□□ 0.3
COL9A3-201ENST00000343916 GJE1A6NN92 205 aa16.94■□□□□ 0.3
COL9A3-201ENST00000343916 B4E171 279 aa16.94■□□□□ 0.3
COL9A3-201ENST00000343916 SIGLEC5O15389 551 aa16.94■□□□□ 0.3
COL9A3-201ENST00000343916 B4GALT1P15291 398 aa16.94■□□□□ 0.3
COL9A3-201ENST00000343916 PI3P19957 117 aa16.94■□□□□ 0.3
COL9A3-201ENST00000343916 TSPAN7P41732 249 aa16.94■□□□□ 0.3
COL9A3-201ENST00000343916 ATP1B3P54709 279 aa16.94■□□□□ 0.3
COL9A3-201ENST00000343916 RPS27AP62979 156 aaKnown RBP16.94■□□□□ 0.3
COL9A3-201ENST00000343916 HGFACQ04756 655 aa16.94■□□□□ 0.3
COL9A3-201ENST00000343916 FAM27BQ5VT28 67 aa16.94■□□□□ 0.3
COL9A3-201ENST00000343916 HOGA1Q86XE5 327 aa16.94■□□□□ 0.3
COL9A3-201ENST00000343916 BVESQ8NE79 360 aa16.94■□□□□ 0.3
COL9A3-201ENST00000343916 PHB2Q99623 299 aa16.94■□□□□ 0.3
COL9A3-201ENST00000343916 RLN2P04090 185 aa16.93■□□□□ 0.3
COL9A3-201ENST00000343916 TBPP20226 339 aa16.93■□□□□ 0.3
COL9A3-201ENST00000343916 ACP1P24666 158 aa16.93■□□□□ 0.3
COL9A3-201ENST00000343916 THBS4P35443 961 aa16.93■□□□□ 0.3
COL9A3-201ENST00000343916 MRPS34P82930 218 aaKnown RBP16.93■□□□□ 0.3
COL9A3-201ENST00000343916 ZNF273Q14593 569 aa16.93■□□□□ 0.3
COL9A3-201ENST00000343916 ZNF774Q6NX45 483 aa16.93■□□□□ 0.3
COL9A3-201ENST00000343916 RELL2Q8NC24 303 aaPredicted RBP16.93■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms