RNA–Protein interactions for RNA: ENST00000340660.10

ATXN3-201, Transcript of ataxin 3, humanhuman

TSL 1 (best) BASIC

Gene ATXN3, Length 1,205 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-201ENST00000340660 CENPBD1B2RD01 187 aa8.34□□□□□ -1.07
ATXN3-201ENST00000340660 M0R3H8 397 aa8.34□□□□□ -1.07
ATXN3-201ENST00000340660 GMDSO60547 372 aa8.34□□□□□ -1.07
ATXN3-201ENST00000340660 MXRA7P84157 204 aa8.34□□□□□ -1.07
ATXN3-201ENST00000340660 PITPNAQ00169 270 aa8.34□□□□□ -1.07
ATXN3-201ENST00000340660 SPIBQ01892 262 aa8.34□□□□□ -1.07
ATXN3-201ENST00000340660 CFHR3Q02985 330 aa8.34□□□□□ -1.07
ATXN3-201ENST00000340660 ALG10BQ5I7T1 473 aa8.34□□□□□ -1.07
ATXN3-201ENST00000340660 ANKRD13BQ86YJ7 626 aa8.34□□□□□ -1.07
ATXN3-201ENST00000340660 LYPD1Q8N2G4 141 aa8.34□□□□□ -1.07
ATXN3-201ENST00000340660 DPP10Q8N608 796 aa8.34□□□□□ -1.07
ATXN3-201ENST00000340660 KRTCAP2Q8N6L1 136 aa8.34□□□□□ -1.07
ATXN3-201ENST00000340660 TMEM185AQ8NFB2 350 aa8.34□□□□□ -1.07
ATXN3-201ENST00000340660 FBXO25Q8TCJ0 367 aa8.34□□□□□ -1.07
ATXN3-201ENST00000340660 SPRYD4Q8WW59 207 aaPredicted RBP8.34□□□□□ -1.07
ATXN3-201ENST00000340660 RGP1Q92546 391 aaPredicted RBP8.34□□□□□ -1.07
ATXN3-201ENST00000340660 FRZBQ92765 325 aa8.34□□□□□ -1.07
ATXN3-201ENST00000340660 HDAC2Q92769 488 aaKnown RBP8.34□□□□□ -1.07
ATXN3-201ENST00000340660 RAB3IPQ96QF0 476 aaPredicted RBP8.34□□□□□ -1.07
ATXN3-201ENST00000340660 MRPL57Q9BQC6 102 aaKnown RBP8.34□□□□□ -1.07
ATXN3-201ENST00000340660 PARD6BQ9BYG5 372 aa8.34□□□□□ -1.07
ATXN3-201ENST00000340660 ALX4Q9H161 411 aaPredicted RBP8.34□□□□□ -1.07
ATXN3-201ENST00000340660 WFDC10AQ9H1F0 79 aa8.34□□□□□ -1.07
ATXN3-201ENST00000340660 MRPL46Q9H2W6 279 aaKnown RBP8.34□□□□□ -1.07
ATXN3-201ENST00000340660 EMC7Q9NPA0 242 aa8.34□□□□□ -1.07
ATXN3-201ENST00000340660 RPS6KB2Q9UBS0 482 aa8.34□□□□□ -1.07
ATXN3-201ENST00000340660 STUB1Q9UNE7 303 aa8.34□□□□□ -1.07
ATXN3-201ENST00000340660 C17orf98A8MV24 154 aa8.33□□□□□ -1.08
ATXN3-201ENST00000340660 UMPSP11172 480 aa8.33□□□□□ -1.08
ATXN3-201ENST00000340660 PSMB8P28062 276 aa8.33□□□□□ -1.08
ATXN3-201ENST00000340660 BRS3P32247 399 aa8.33□□□□□ -1.08
ATXN3-201ENST00000340660 RPL3P39023 403 aaKnown RBP8.33□□□□□ -1.08
ATXN3-201ENST00000340660 RPL31P62899 125 aaKnown RBP8.33□□□□□ -1.08
ATXN3-201ENST00000340660 SCRN3Q0VDG4 424 aa8.33□□□□□ -1.08
ATXN3-201ENST00000340660 IL18R1Q13478 541 aa8.33□□□□□ -1.08
ATXN3-201ENST00000340660 Q6ZR54 194 aa8.33□□□□□ -1.08
ATXN3-201ENST00000340660 KCTD8Q6ZWB6 473 aa8.33□□□□□ -1.08
ATXN3-201ENST00000340660 DEFB125Q8N687 156 aa8.33□□□□□ -1.08
ATXN3-201ENST00000340660 NATD1Q8N6N6 113 aa8.33□□□□□ -1.08
ATXN3-201ENST00000340660 PYROXD1Q8WU10 500 aa8.33□□□□□ -1.08
ATXN3-201ENST00000340660 MS4A14Q96JA4 679 aa8.33□□□□□ -1.08
ATXN3-201ENST00000340660 DUSP26Q9BV47 211 aa8.33□□□□□ -1.08
ATXN3-201ENST00000340660 SLC22A4Q9H015 551 aa8.33□□□□□ -1.08
ATXN3-201ENST00000340660 KRCC1Q9NPI7 259 aaPredicted RBP8.33□□□□□ -1.08
ATXN3-201ENST00000340660 NOP16Q9Y3C1 178 aaKnown RBP8.33□□□□□ -1.08
ATXN3-201ENST00000340660 A0A1W2PPH5 198 aa8.32□□□□□ -1.08
ATXN3-201ENST00000340660 MT-ATP6P00846 226 aa8.32□□□□□ -1.08
ATXN3-201ENST00000340660 IGHG4P01861 327 aa8.32□□□□□ -1.08
ATXN3-201ENST00000340660 MSR1P21757 451 aa8.32□□□□□ -1.08
ATXN3-201ENST00000340660 GPR12P47775 334 aa8.32□□□□□ -1.08
ATXN3-201ENST00000340660 SERPINB8P50452 374 aa8.32□□□□□ -1.08
ATXN3-201ENST00000340660 CFAP77Q6ZQR2 320 aa8.32□□□□□ -1.08
ATXN3-201ENST00000340660 C3orf62Q6ZUJ4 267 aa8.32□□□□□ -1.08
ATXN3-201ENST00000340660 PGAM4Q8N0Y7 254 aa8.32□□□□□ -1.08
ATXN3-201ENST00000340660 LSMEM1Q8N8F7 131 aa8.32□□□□□ -1.08
ATXN3-201ENST00000340660 OR4M1Q8NGD0 313 aa8.32□□□□□ -1.08
ATXN3-201ENST00000340660 OR1F12Q8NHA8 337 aa8.32□□□□□ -1.08
ATXN3-201ENST00000340660 SLCO4A1Q96BD0 722 aa8.32□□□□□ -1.08
ATXN3-201ENST00000340660 UBE2E2Q96LR5 201 aa8.32□□□□□ -1.08
ATXN3-201ENST00000340660 DESI2Q9BSY9 194 aa8.32□□□□□ -1.08
ATXN3-201ENST00000340660 FN3KQ9H479 309 aa8.32□□□□□ -1.08
ATXN3-201ENST00000340660 GSTO2Q9H4Y5 243 aa8.32□□□□□ -1.08
ATXN3-201ENST00000340660 SRD5A3Q9H8P0 318 aa8.32□□□□□ -1.08
ATXN3-201ENST00000340660 PKHD1L1Q86WI1 4243 aa8.32□□□□□ -1.08
ATXN3-201ENST00000340660 A0A1W2PPL8 197 aa8.31□□□□□ -1.08
ATXN3-201ENST00000340660 IGLL5B9A064 214 aa8.31□□□□□ -1.08
ATXN3-201ENST00000340660 MCIDASD6RGH6 385 aa8.31□□□□□ -1.08
ATXN3-201ENST00000340660 RGS11O94810 467 aa8.31□□□□□ -1.08
ATXN3-201ENST00000340660 NANOS2P60321 138 aaKnown RBP8.31□□□□□ -1.08
ATXN3-201ENST00000340660 CD47Q08722 323 aa8.31□□□□□ -1.08
ATXN3-201ENST00000340660 TMPRSS11FQ6ZWK6 438 aa8.31□□□□□ -1.08
ATXN3-201ENST00000340660 ZBTB46Q86UZ6 589 aa8.31□□□□□ -1.08
ATXN3-201ENST00000340660 GLB1L2Q8IW92 636 aa8.31□□□□□ -1.08
ATXN3-201ENST00000340660 ZNF491Q8N8L2 437 aa8.31□□□□□ -1.08
ATXN3-201ENST00000340660 OR4P4Q8NGL7 312 aa8.31□□□□□ -1.08
ATXN3-201ENST00000340660 DNAJA4Q8WW22 397 aaPredicted RBP8.31□□□□□ -1.08
ATXN3-201ENST00000340660 ITFG2Q969R8 447 aa8.31□□□□□ -1.08
ATXN3-201ENST00000340660 DGCR6LQ9BY27 220 aa8.31□□□□□ -1.08
ATXN3-201ENST00000340660 KLK15Q9H2R5 256 aa8.31□□□□□ -1.08
ATXN3-201ENST00000340660 OR51J1Q9H342 316 aa8.31□□□□□ -1.08
ATXN3-201ENST00000340660 RABEP2Q9H5N1 569 aa8.31□□□□□ -1.08
ATXN3-201ENST00000340660 EGLN3Q9H6Z9 239 aa8.31□□□□□ -1.08
ATXN3-201ENST00000340660 POLE4Q9NR33 117 aa8.31□□□□□ -1.08
ATXN3-201ENST00000340660 PAPOLBQ9NRJ5 636 aaKnown RBP8.31□□□□□ -1.08
ATXN3-201ENST00000340660 AGRNO00468 2067 aa8.31□□□□□ -1.08
ATXN3-201ENST00000340660 IGKV1D-17A0A075B6S4 117 aa8.3□□□□□ -1.08
ATXN3-201ENST00000340660 CD300LBA8K4G0 201 aa8.3□□□□□ -1.08
ATXN3-201ENST00000340660 LINC01619G3V211 115 aa8.3□□□□□ -1.08
ATXN3-201ENST00000340660 NR2F1P10589 423 aa8.3□□□□□ -1.08
ATXN3-201ENST00000340660 MAGEA12P43365 314 aa8.3□□□□□ -1.08
ATXN3-201ENST00000340660 UGT2B15P54855 530 aa8.3□□□□□ -1.08
ATXN3-201ENST00000340660 GALNTL6Q49A17 601 aa8.3□□□□□ -1.08
ATXN3-201ENST00000340660 CCDC92Q53HC0 331 aaPredicted RBP8.3□□□□□ -1.08
ATXN3-201ENST00000340660 SOHLH1Q5JUK2 328 aa8.3□□□□□ -1.08
ATXN3-201ENST00000340660 ARMC4Q5T2S8 1044 aa8.3□□□□□ -1.08
ATXN3-201ENST00000340660 OTPQ5XKR4 325 aa8.3□□□□□ -1.08
ATXN3-201ENST00000340660 LRRC34Q8IZ02 419 aa8.3□□□□□ -1.08
ATXN3-201ENST00000340660 POM121L12Q8N7R1 296 aa8.3□□□□□ -1.08
ATXN3-201ENST00000340660 OR4A15Q8NGL6 344 aa8.3□□□□□ -1.08
ATXN3-201ENST00000340660 MARCOQ9UEW3 520 aaPredicted RBP8.3□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 60.1 ms