RNA–Protein interactions for RNA: ENST00000338963.6

NEDD4-201, Transcript of neural precursor cell expressed, developmentally down-regulated 4, E3 ubiquitin protein ligase, humanhuman

TSL 1 (best) BASIC

Gene NEDD4, Length 7,019 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4-201ENST00000338963 G3V4G9 280 aa3.71□□□□□ -1.82
NEDD4-201ENST00000338963 K7EQM0 130 aa3.71□□□□□ -1.82
NEDD4-201ENST00000338963 B4GALT2O60909 372 aa3.71□□□□□ -1.82
NEDD4-201ENST00000338963 SCGB2A1O75556 95 aa3.71□□□□□ -1.82
NEDD4-201ENST00000338963 VENTXO95231 258 aa3.71□□□□□ -1.82
NEDD4-201ENST00000338963 CD3DP04234 171 aa3.71□□□□□ -1.82
NEDD4-201ENST00000338963 ERGP11308 486 aa3.71□□□□□ -1.82
NEDD4-201ENST00000338963 NTSR1P30989 418 aa3.71□□□□□ -1.82
NEDD4-201ENST00000338963 VIPR2P41587 438 aa3.71□□□□□ -1.82
NEDD4-201ENST00000338963 LGALS7P47929 136 aa3.71□□□□□ -1.82
NEDD4-201ENST00000338963 YBX1P67809 324 aaKnown RBP3.71□□□□□ -1.82
NEDD4-201ENST00000338963 SEC11AP67812 179 aa3.71□□□□□ -1.82
NEDD4-201ENST00000338963 STUMQ69YW2 141 aa3.71□□□□□ -1.82
NEDD4-201ENST00000338963 RTN4RL2Q86UN3 420 aa3.71□□□□□ -1.82
NEDD4-201ENST00000338963 AMIGO3Q86WK7 504 aa3.71□□□□□ -1.82
NEDD4-201ENST00000338963 SDSLQ96GA7 329 aa3.71□□□□□ -1.82
NEDD4-201ENST00000338963 NICN1Q9BSH3 213 aa3.71□□□□□ -1.82
NEDD4-201ENST00000338963 YAE1D1Q9NRH1 226 aa3.71□□□□□ -1.82
NEDD4-201ENST00000338963 MAP2P11137 1827 aaKnown RBP3.71□□□□□ -1.82
NEDD4-201ENST00000338963 KCNE1BA0A087WTH5 132 aa3.71□□□□□ -1.82
NEDD4-201ENST00000338963 C4orf47A7E2U8 309 aa3.71□□□□□ -1.82
NEDD4-201ENST00000338963 DIRC3C9JPN6 131 aa3.71□□□□□ -1.82
NEDD4-201ENST00000338963 B3GAT3O94766 335 aa3.71□□□□□ -1.82
NEDD4-201ENST00000338963 ADH5P11766 374 aa3.71□□□□□ -1.82
NEDD4-201ENST00000338963 SLC6A6P31641 620 aa3.71□□□□□ -1.82
NEDD4-201ENST00000338963 PCBP3P57721 371 aaKnown RBP3.71□□□□□ -1.82
NEDD4-201ENST00000338963 TAS2R41P59536 307 aa3.71□□□□□ -1.82
NEDD4-201ENST00000338963 PPP2CBP62714 309 aa3.71□□□□□ -1.82
NEDD4-201ENST00000338963 SNRPNP63162 240 aaKnown RBP3.71□□□□□ -1.82
NEDD4-201ENST00000338963 PPP2CAP67775 309 aa3.71□□□□□ -1.82
NEDD4-201ENST00000338963 IL13RA2Q14627 380 aa3.71□□□□□ -1.82
NEDD4-201ENST00000338963 PSMG4Q5JS54 123 aa3.71□□□□□ -1.82
NEDD4-201ENST00000338963 OR2AE1Q8NHA4 323 aa3.71□□□□□ -1.82
NEDD4-201ENST00000338963 PIGBQ92521 554 aa3.71□□□□□ -1.82
NEDD4-201ENST00000338963 SLC25A38Q96DW6 304 aa3.71□□□□□ -1.82
NEDD4-201ENST00000338963 TRAPPC1Q9Y5R8 145 aa3.71□□□□□ -1.82
NEDD4-201ENST00000338963 TNFRSF18Q9Y5U5 241 aa3.71□□□□□ -1.82
NEDD4-201ENST00000338963 HS3ST3B1Q9Y662 390 aa3.71□□□□□ -1.82
NEDD4-201ENST00000338963 TRAV1-1A0A0B4J248 108 aa3.71□□□□□ -1.82
NEDD4-201ENST00000338963 LOC102723971A0A1B0GUV8 181 aa3.71□□□□□ -1.82
NEDD4-201ENST00000338963 DBHP09172 617 aa3.71□□□□□ -1.82
NEDD4-201ENST00000338963 C1QTNF9P0C862 333 aa3.71□□□□□ -1.82
NEDD4-201ENST00000338963 MPC1LP0DKB6 136 aa3.71□□□□□ -1.82
NEDD4-201ENST00000338963 PRDX3P30048 256 aaKnown RBP3.71□□□□□ -1.82
NEDD4-201ENST00000338963 NSG1P42857 185 aa3.71□□□□□ -1.82
NEDD4-201ENST00000338963 FLT3LGP49771 235 aa3.71□□□□□ -1.82
NEDD4-201ENST00000338963 TCTAP57738 103 aa3.71□□□□□ -1.82
NEDD4-201ENST00000338963 TP53I3Q53FA7 332 aa3.71□□□□□ -1.82
NEDD4-201ENST00000338963 SPRED2Q7Z698 418 aa3.71□□□□□ -1.82
NEDD4-201ENST00000338963 CPOQ8IVL8 374 aa3.71□□□□□ -1.82
NEDD4-201ENST00000338963 SLC16A11Q8NCK7 471 aa3.71□□□□□ -1.82
NEDD4-201ENST00000338963 OR2I1PQ8NGU4 316 aa3.71□□□□□ -1.82
NEDD4-201ENST00000338963 NINJ1Q92982 152 aa3.71□□□□□ -1.82
NEDD4-201ENST00000338963 ABHD14BQ96IU4 210 aa3.71□□□□□ -1.82
NEDD4-201ENST00000338963 SPIN2AQ99865 258 aa3.71□□□□□ -1.82
NEDD4-201ENST00000338963 SPIN2BQ9BPZ2 258 aa3.71□□□□□ -1.82
NEDD4-201ENST00000338963 CDT1Q9H211 546 aa3.71□□□□□ -1.82
NEDD4-201ENST00000338963 GPR84Q9NQS5 396 aa3.71□□□□□ -1.82
NEDD4-201ENST00000338963 FLRT3Q9NZU0 649 aa3.71□□□□□ -1.82
NEDD4-201ENST00000338963 IGHV2-26A0A0B4J1V2 119 aa3.7□□□□□ -1.82
NEDD4-201ENST00000338963 ZNF891A8MT65 544 aaPredicted RBP3.7□□□□□ -1.82
NEDD4-201ENST00000338963 C1QL1O75973 258 aa3.7□□□□□ -1.82
NEDD4-201ENST00000338963 POU2F2P09086 479 aa3.7□□□□□ -1.82
NEDD4-201ENST00000338963 SFTPDP35247 375 aa3.7□□□□□ -1.82
NEDD4-201ENST00000338963 BUD31P41223 144 aaPredicted RBP3.7□□□□□ -1.82
NEDD4-201ENST00000338963 OR1E2P47887 323 aa3.7□□□□□ -1.82
NEDD4-201ENST00000338963 GAS1P54826 345 aa3.7□□□□□ -1.82
NEDD4-201ENST00000338963 MLF1P58340 268 aa3.7□□□□□ -1.82
NEDD4-201ENST00000338963 CD300EQ496F6 205 aaPredicted RBP3.7□□□□□ -1.82
NEDD4-201ENST00000338963 FFAR4Q5NUL3 377 aa3.7□□□□□ -1.82
NEDD4-201ENST00000338963 TMEM207Q6UWW9 146 aa3.7□□□□□ -1.82
NEDD4-201ENST00000338963 SYT9Q86SS6 491 aa3.7□□□□□ -1.82
NEDD4-201ENST00000338963 OR10G3Q8NGC4 313 aa3.7□□□□□ -1.82
NEDD4-201ENST00000338963 FAM213BQ8TBF2 198 aa3.7□□□□□ -1.82
NEDD4-201ENST00000338963 EID2BQ96D98 161 aa3.7□□□□□ -1.82
NEDD4-201ENST00000338963 SIGLEC12Q96PQ1 595 aa3.7□□□□□ -1.82
NEDD4-201ENST00000338963 SLC2A4RGQ9NR83 387 aa3.7□□□□□ -1.82
NEDD4-201ENST00000338963 BTG4Q9NY30 223 aa3.7□□□□□ -1.82
NEDD4-201ENST00000338963 ARAP2Q8WZ64 1704 aa3.7□□□□□ -1.82
NEDD4-201ENST00000338963 IGSF23A1L1A6 192 aa3.7□□□□□ -1.82
NEDD4-201ENST00000338963 A6NIN4 97 aa3.7□□□□□ -1.82
NEDD4-201ENST00000338963 M0QZ24 198 aa3.7□□□□□ -1.82
NEDD4-201ENST00000338963 ZNF205O95201 554 aa3.7□□□□□ -1.82
NEDD4-201ENST00000338963 NRASP01111 189 aa3.7□□□□□ -1.82
NEDD4-201ENST00000338963 KRASP01116 189 aa3.7□□□□□ -1.82
NEDD4-201ENST00000338963 OMGP23515 440 aa3.7□□□□□ -1.82
NEDD4-201ENST00000338963 HINT1P49773 126 aaPredicted RBP3.7□□□□□ -1.82
NEDD4-201ENST00000338963 FOXL2P58012 376 aa3.7□□□□□ -1.82
NEDD4-201ENST00000338963 CPSF6Q16630 551 aaKnown RBP eCLIP3.7□□□□□ -1.82
NEDD4-201ENST00000338963 CYP2G1PQ6ZSU1 146 aa3.7□□□□□ -1.82
NEDD4-201ENST00000338963 TMPRSS12Q86WS5 348 aa3.7□□□□□ -1.82
NEDD4-201ENST00000338963 FAM129CQ86XR2 697 aa3.7□□□□□ -1.82
NEDD4-201ENST00000338963 CSNK1A1LQ8N752 337 aa3.7□□□□□ -1.82
NEDD4-201ENST00000338963 C2orf15Q8WU43 125 aaKnown RBP3.7□□□□□ -1.82
NEDD4-201ENST00000338963 ZNF703Q9H7S9 590 aaPredicted RBP3.7□□□□□ -1.82
NEDD4-201ENST00000338963 OR5V1Q9UGF6 321 aa3.7□□□□□ -1.82
NEDD4-201ENST00000338963 SLC5A6Q9Y289 635 aa3.7□□□□□ -1.82
NEDD4-201ENST00000338963 A0A0G2JMM0 328 aa3.7□□□□□ -1.82
NEDD4-201ENST00000338963 A0A1W2PPB8 328 aa3.7□□□□□ -1.82
NEDD4-201ENST00000338963 TMEM88BA6NKF7 163 aa3.7□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms