RNA–Protein interactions for RNA: ENST00000336904.7

SNCA-201, Transcript of synuclein alpha, humanhuman

APPRIS P1 TSL 2 BASIC

Gene SNCA, Length 3,041 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-201ENST00000336904 RAP2BP61225 183 aa7.73□□□□□ -1.17
SNCA-201ENST00000336904 CSNK2A1P68400 391 aaPredicted RBP7.73□□□□□ -1.17
SNCA-201ENST00000336904 C3P1Q6ZMU1 363 aa7.73□□□□□ -1.17
SNCA-201ENST00000336904 SPICQ8N5J4 248 aa7.73□□□□□ -1.17
SNCA-201ENST00000336904 FNDC9Q8TBE3 224 aa7.73□□□□□ -1.17
SNCA-201ENST00000336904 C15orf40Q8WUR7 153 aa7.73□□□□□ -1.17
SNCA-201ENST00000336904 PNPLA2Q96AD5 504 aa7.73□□□□□ -1.17
SNCA-201ENST00000336904 MFFQ9GZY8 342 aa7.73□□□□□ -1.17
SNCA-201ENST00000336904 SH2D2AQ9NP31 389 aa7.73□□□□□ -1.17
SNCA-201ENST00000336904 ACKR4Q9NPB9 350 aa7.73□□□□□ -1.17
SNCA-201ENST00000336904 KCNN3Q9UGI6 736 aa7.73□□□□□ -1.17
SNCA-201ENST00000336904 PTPRZ1P23471 2315 aaPredicted RBP7.73□□□□□ -1.17
SNCA-201ENST00000336904 IGKV1-27A0A075B6S5 117 aa7.73□□□□□ -1.17
SNCA-201ENST00000336904 A0A1W2PR80 420 aa7.73□□□□□ -1.17
SNCA-201ENST00000336904 SNRPGP15A8MWD9 76 aa7.73□□□□□ -1.17
SNCA-201ENST00000336904 WISP2O76076 250 aa7.73□□□□□ -1.17
SNCA-201ENST00000336904 ONECUT2O95948 504 aa7.73□□□□□ -1.17
SNCA-201ENST00000336904 HLA-HP01893 362 aa7.73□□□□□ -1.17
SNCA-201ENST00000336904 HPNP05981 417 aa7.73□□□□□ -1.17
SNCA-201ENST00000336904 SP9P0CG40 484 aa7.73□□□□□ -1.17
SNCA-201ENST00000336904 CPN1P15169 458 aa7.73□□□□□ -1.17
SNCA-201ENST00000336904 AMY2BP19961 511 aa7.73□□□□□ -1.17
SNCA-201ENST00000336904 ADH6P28332 368 aa7.73□□□□□ -1.17
SNCA-201ENST00000336904 HOXA6P31267 233 aa7.73□□□□□ -1.17
SNCA-201ENST00000336904 PTGFRP43088 359 aa7.73□□□□□ -1.17
SNCA-201ENST00000336904 MTCP1P56278 107 aa7.73□□□□□ -1.17
SNCA-201ENST00000336904 GMFBP60983 142 aa7.73□□□□□ -1.17
SNCA-201ENST00000336904 CAMK2BQ13554 666 aa7.73□□□□□ -1.17
SNCA-201ENST00000336904 PIGYQ3MUY2 71 aa7.73□□□□□ -1.17
SNCA-201ENST00000336904 TSPO2Q5TGU0 170 aa7.73□□□□□ -1.17
SNCA-201ENST00000336904 UNQ6126/PRO20091Q6UXV3 157 aa7.73□□□□□ -1.17
SNCA-201ENST00000336904 DOK3Q7L591 496 aa7.73□□□□□ -1.17
SNCA-201ENST00000336904 SKA3Q8IX90 412 aa7.73□□□□□ -1.17
SNCA-201ENST00000336904 GPR137CQ8N3F9 429 aa7.73□□□□□ -1.17
SNCA-201ENST00000336904 C12orf49Q9H741 205 aa7.73□□□□□ -1.17
SNCA-201ENST00000336904 SHANK1Q9Y566 2161 aa7.73□□□□□ -1.17
SNCA-201ENST00000336904 DISC1C4P0D8 188 aa7.73□□□□□ -1.17
SNCA-201ENST00000336904 OR2A4O95047 310 aa7.73□□□□□ -1.17
SNCA-201ENST00000336904 HIST1H1DP16402 221 aaKnown RBP7.73□□□□□ -1.17
SNCA-201ENST00000336904 GLRA1P23415 457 aa7.73□□□□□ -1.17
SNCA-201ENST00000336904 ZNF84P51523 738 aa7.73□□□□□ -1.17
SNCA-201ENST00000336904 PMP22Q01453 160 aa7.73□□□□□ -1.17
SNCA-201ENST00000336904 ZNF546Q86UE3 836 aa7.73□□□□□ -1.17
SNCA-201ENST00000336904 PNLDC1Q8NA58 520 aaKnown RBP7.73□□□□□ -1.17
SNCA-201ENST00000336904 CSNK2A3Q8NEV1 391 aa7.73□□□□□ -1.17
SNCA-201ENST00000336904 PPP1R1CQ8WVI7 109 aa7.73□□□□□ -1.17
SNCA-201ENST00000336904 THRSPQ92748 146 aa7.73□□□□□ -1.17
SNCA-201ENST00000336904 TMEM54Q969K7 222 aa7.73□□□□□ -1.17
SNCA-201ENST00000336904 REEP6Q96HR9 211 aa7.73□□□□□ -1.17
SNCA-201ENST00000336904 OR2A7Q96R45 310 aa7.73□□□□□ -1.17
SNCA-201ENST00000336904 S100A13Q99584 98 aa7.73□□□□□ -1.17
SNCA-201ENST00000336904 NAA11Q9BSU3 229 aaPredicted RBP7.73□□□□□ -1.17
SNCA-201ENST00000336904 FAAP24Q9BTP7 215 aa7.73□□□□□ -1.17
SNCA-201ENST00000336904 MS4A7Q9GZW8 240 aaPredicted RBP7.73□□□□□ -1.17
SNCA-201ENST00000336904 NARFLQ9H6Q4 476 aa7.73□□□□□ -1.17
SNCA-201ENST00000336904 FANCFQ9NPI8 374 aa7.73□□□□□ -1.17
SNCA-201ENST00000336904 SLC17A5Q9NRA2 495 aa7.73□□□□□ -1.17
SNCA-201ENST00000336904 FOXD3Q9UJU5 478 aaPredicted RBP7.73□□□□□ -1.17
SNCA-201ENST00000336904 MCTS1Q9ULC4 181 aaKnown RBP7.73□□□□□ -1.17
SNCA-201ENST00000336904 MAB21L2Q9Y586 359 aa7.73□□□□□ -1.17
SNCA-201ENST00000336904 ZNF503-AS2A6NEH8 195 aa7.72□□□□□ -1.17
SNCA-201ENST00000336904 ZNF716A6NP11 495 aa7.72□□□□□ -1.17
SNCA-201ENST00000336904 M0R296 226 aa7.72□□□□□ -1.17
SNCA-201ENST00000336904 IFNA7P01567 189 aa7.72□□□□□ -1.17
SNCA-201ENST00000336904 S100A11P31949 105 aa7.72□□□□□ -1.17
SNCA-201ENST00000336904 SCAND1P57086 179 aa7.72□□□□□ -1.17
SNCA-201ENST00000336904 PSG4Q00888 419 aa7.72□□□□□ -1.17
SNCA-201ENST00000336904 SLC16A14Q7RTX9 510 aa7.72□□□□□ -1.17
SNCA-201ENST00000336904 TMEM200AQ86VY9 491 aa7.72□□□□□ -1.17
SNCA-201ENST00000336904 TUSC5Q8IXB3 177 aa7.72□□□□□ -1.17
SNCA-201ENST00000336904 PIGCQ92535 297 aa7.72□□□□□ -1.17
SNCA-201ENST00000336904 GPHA2Q96T91 129 aa7.72□□□□□ -1.17
SNCA-201ENST00000336904 OR10A2Q9H208 303 aa7.72□□□□□ -1.17
SNCA-201ENST00000336904 EHFQ9NZC4 300 aa7.72□□□□□ -1.17
SNCA-201ENST00000336904 OTOGLQ3ZCN5 2332 aa7.72□□□□□ -1.17
SNCA-201ENST00000336904 OR5H14A6NHG9 310 aa7.72□□□□□ -1.17
SNCA-201ENST00000336904 ZSCAN5BA6NJL1 495 aa7.72□□□□□ -1.17
SNCA-201ENST00000336904 CDX4O14627 284 aaPredicted RBP7.72□□□□□ -1.17
SNCA-201ENST00000336904 NUPL2O15504 423 aaKnown RBP7.72□□□□□ -1.17
SNCA-201ENST00000336904 EIF1BO60739 113 aaKnown RBP7.72□□□□□ -1.17
SNCA-201ENST00000336904 DHRS3O75911 302 aa7.72□□□□□ -1.17
SNCA-201ENST00000336904 PGAM2P15259 253 aa7.72□□□□□ -1.17
SNCA-201ENST00000336904 DUSP1P28562 367 aa7.72□□□□□ -1.17
SNCA-201ENST00000336904 NOVA1P51513 510 aaKnown RBP7.72□□□□□ -1.17
SNCA-201ENST00000336904 GRB2P62993 217 aaKnown RBP7.72□□□□□ -1.17
SNCA-201ENST00000336904 ZNF92Q03936 586 aa7.72□□□□□ -1.17
SNCA-201ENST00000336904 SPEM2Q0P670 501 aa7.72□□□□□ -1.17
SNCA-201ENST00000336904 RFPL4BQ6ZWI9 263 aa7.72□□□□□ -1.17
SNCA-201ENST00000336904 FOXRED1Q96CU9 486 aaPredicted RBP7.72□□□□□ -1.17
SNCA-201ENST00000336904 UTP23Q9BRU9 249 aaKnown RBP7.72□□□□□ -1.17
SNCA-201ENST00000336904 DEFB127Q9H1M4 99 aa7.72□□□□□ -1.17
SNCA-201ENST00000336904 GSKIPQ9P0R6 139 aa7.72□□□□□ -1.17
SNCA-201ENST00000336904 LIPGQ9Y5X9 500 aa7.72□□□□□ -1.17
SNCA-201ENST00000336904 C9orf170A2RU37 121 aa7.71□□□□□ -1.17
SNCA-201ENST00000336904 MSTNO14793 375 aa7.71□□□□□ -1.17
SNCA-201ENST00000336904 YKT6O15498 198 aa7.71□□□□□ -1.17
SNCA-201ENST00000336904 RP2O75695 350 aa7.71□□□□□ -1.17
SNCA-201ENST00000336904 NEURL1O76050 574 aa7.71□□□□□ -1.17
SNCA-201ENST00000336904 TNFSF15O95150 251 aa7.71□□□□□ -1.17
SNCA-201ENST00000336904 CD74P04233 296 aa7.71□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms