RNA–Protein interactions for RNA: ENST00000331163.10

PDGFB-201, Transcript of platelet derived growth factor subunit B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDGFB, Length 3,497 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFB-201ENST00000331163 CFL1P23528 166 aaKnown RBP13.93□□□□□ -0.18
PDGFB-201ENST00000331163 CLDN18P56856 261 aa13.93□□□□□ -0.18
PDGFB-201ENST00000331163 SCRN3Q0VDG4 424 aa13.93□□□□□ -0.18
PDGFB-201ENST00000331163 ARFRP1Q13795 201 aa13.93□□□□□ -0.18
PDGFB-201ENST00000331163 EIF2S3LQ2VIR3 472 aaKnown RBP13.93□□□□□ -0.18
PDGFB-201ENST00000331163 BTN2A1Q7KYR7 527 aa13.93□□□□□ -0.18
PDGFB-201ENST00000331163 CDC20BQ86Y33 519 aa13.93□□□□□ -0.18
PDGFB-201ENST00000331163 ZFP62Q8NB50 900 aaPredicted RBP13.93□□□□□ -0.18
PDGFB-201ENST00000331163 ASB17Q8WXJ9 295 aa13.93□□□□□ -0.18
PDGFB-201ENST00000331163 GPR35Q9HC97 309 aa13.93□□□□□ -0.18
PDGFB-201ENST00000331163 UFSP2Q9NUQ7 469 aa13.93□□□□□ -0.18
PDGFB-201ENST00000331163 GPR160Q9UJ42 338 aa13.93□□□□□ -0.18
PDGFB-201ENST00000331163 RELNP78509 3460 aa13.93□□□□□ -0.18
PDGFB-201ENST00000331163 SHANK1Q9Y566 2161 aa13.92□□□□□ -0.18
PDGFB-201ENST00000331163 CSTBP04080 98 aaKnown RBP13.92□□□□□ -0.18
PDGFB-201ENST00000331163 MOB3CQ70IA8 216 aa13.92□□□□□ -0.18
PDGFB-201ENST00000331163 SLC43A2Q8N370 569 aa13.92□□□□□ -0.18
PDGFB-201ENST00000331163 SLC22A24Q8N4F4 322 aa13.92□□□□□ -0.18
PDGFB-201ENST00000331163 OR52H1Q8NGJ2 320 aa13.92□□□□□ -0.18
PDGFB-201ENST00000331163 FGFBP3Q8TAT2 258 aa13.92□□□□□ -0.18
PDGFB-201ENST00000331163 C5orf63A6NC05 138 aa13.92□□□□□ -0.18
PDGFB-201ENST00000331163 FAM74A7A6NL05 159 aa13.92□□□□□ -0.18
PDGFB-201ENST00000331163 PHYHO14832 338 aa13.92□□□□□ -0.18
PDGFB-201ENST00000331163 ZP3P21754 424 aa13.92□□□□□ -0.18
PDGFB-201ENST00000331163 FKBP2P26885 142 aaKnown RBP13.92□□□□□ -0.18
PDGFB-201ENST00000331163 DUSP1P28562 367 aa13.92□□□□□ -0.18
PDGFB-201ENST00000331163 RBMXP38159 391 aaKnown RBP13.92□□□□□ -0.18
PDGFB-201ENST00000331163 FAM74A3Q4VXF1 159 aa13.92□□□□□ -0.18
PDGFB-201ENST00000331163 C4orf45Q96LM5 186 aa13.92□□□□□ -0.18
PDGFB-201ENST00000331163 PCDHGA9Q9Y5G4 932 aaKnown RBP13.92□□□□□ -0.18
PDGFB-201ENST00000331163 CRTAPO75718 401 aaPredicted RBP13.92□□□□□ -0.18
PDGFB-201ENST00000331163 FCGR2AP12318 317 aa13.92□□□□□ -0.18
PDGFB-201ENST00000331163 MAPK3P27361 379 aaPredicted RBP13.92□□□□□ -0.18
PDGFB-201ENST00000331163 CASP6P55212 293 aa13.92□□□□□ -0.18
PDGFB-201ENST00000331163 RIN1Q13671 783 aa13.92□□□□□ -0.18
PDGFB-201ENST00000331163 BRICD5Q6PL45 260 aa13.92□□□□□ -0.18
PDGFB-201ENST00000331163 FBXO17Q96EF6 278 aa13.92□□□□□ -0.18
PDGFB-201ENST00000331163 TAS2R3Q9NYW6 316 aa13.92□□□□□ -0.18
PDGFB-201ENST00000331163 PTTG3PQ9NZH4 202 aa13.92□□□□□ -0.18
PDGFB-201ENST00000331163 TMEM212A6NML5 194 aa13.91□□□□□ -0.18
PDGFB-201ENST00000331163 IGF2P01344 180 aa13.91□□□□□ -0.18
PDGFB-201ENST00000331163 PSMB1P20618 241 aaKnown RBP13.91□□□□□ -0.18
PDGFB-201ENST00000331163 RTP5Q14D33 572 aa13.91□□□□□ -0.18
PDGFB-201ENST00000331163 TREM2Q9NZC2 230 aa13.91□□□□□ -0.18
PDGFB-201ENST00000331163 KALRNO60229 2985 aa13.91□□□□□ -0.18
PDGFB-201ENST00000331163 C3orf80F5H4A9 247 aa13.91□□□□□ -0.18
PDGFB-201ENST00000331163 M0R1B8 84 aa13.91□□□□□ -0.18
PDGFB-201ENST00000331163 HTR3BO95264 441 aa13.91□□□□□ -0.18
PDGFB-201ENST00000331163 GABRR1P24046 479 aa13.91□□□□□ -0.18
PDGFB-201ENST00000331163 DCTDP32321 178 aa13.91□□□□□ -0.18
PDGFB-201ENST00000331163 PITPNAQ00169 270 aa13.91□□□□□ -0.18
PDGFB-201ENST00000331163 TMEM69Q5SWH9 247 aa13.91□□□□□ -0.18
PDGFB-201ENST00000331163 MDS2Q8NDY4 140 aa13.91□□□□□ -0.18
PDGFB-201ENST00000331163 WNT2BQ93097 391 aa13.91□□□□□ -0.18
PDGFB-201ENST00000331163 MARVELD3Q96A59 401 aa13.91□□□□□ -0.18
PDGFB-201ENST00000331163 GPX7Q96SL4 187 aaPredicted RBP13.91□□□□□ -0.18
PDGFB-201ENST00000331163 MNTQ99583 582 aa13.91□□□□□ -0.18
PDGFB-201ENST00000331163 PROCRQ9UNN8 238 aa13.91□□□□□ -0.18
PDGFB-201ENST00000331163 NMBP08949 121 aa13.91□□□□□ -0.18
PDGFB-201ENST00000331163 B3GALT5-AS1P59052 145 aa13.91□□□□□ -0.18
PDGFB-201ENST00000331163 ELFN2Q5R3F8 820 aa13.91□□□□□ -0.18
PDGFB-201ENST00000331163 TMEM244Q5VVB8 128 aa13.91□□□□□ -0.18
PDGFB-201ENST00000331163 PLCXD3Q63HM9 321 aa13.91□□□□□ -0.18
PDGFB-201ENST00000331163 PDZD9Q8IXQ8 264 aa13.91□□□□□ -0.18
PDGFB-201ENST00000331163 ZIC4Q8N9L1 334 aa13.91□□□□□ -0.18
PDGFB-201ENST00000331163 ZNF610Q8N9Z0 462 aa13.91□□□□□ -0.18
PDGFB-201ENST00000331163 OR8B12Q8NGG6 310 aa13.91□□□□□ -0.18
PDGFB-201ENST00000331163 SYNPRQ8TBG9 265 aa13.91□□□□□ -0.18
PDGFB-201ENST00000331163 OR10A2Q9H208 303 aa13.91□□□□□ -0.18
PDGFB-201ENST00000331163 ATPIF1Q9UII2 106 aa13.91□□□□□ -0.18
PDGFB-201ENST00000331163 TLN2Q9Y4G6 2542 aa13.9□□□□□ -0.18
PDGFB-201ENST00000331163 GOSR2O14653 212 aa13.9□□□□□ -0.18
PDGFB-201ENST00000331163 CREBL2O60519 120 aaPredicted RBP13.9□□□□□ -0.18
PDGFB-201ENST00000331163 UBL3O95164 117 aa13.9□□□□□ -0.18
PDGFB-201ENST00000331163 ZNF35P13682 527 aa13.9□□□□□ -0.18
PDGFB-201ENST00000331163 MTCP1P56278 107 aa13.9□□□□□ -0.18
PDGFB-201ENST00000331163 TMPRSS3P57727 454 aa13.9□□□□□ -0.18
PDGFB-201ENST00000331163 EFNB1P98172 346 aa13.9□□□□□ -0.18
PDGFB-201ENST00000331163 GLT8D1Q68CQ7 371 aa13.9□□□□□ -0.18
PDGFB-201ENST00000331163 PGAP1Q75T13 922 aa13.9□□□□□ -0.18
PDGFB-201ENST00000331163 CMTM4Q8IZR5 234 aa13.9□□□□□ -0.18
PDGFB-201ENST00000331163 PRSS35Q8N3Z0 413 aa13.9□□□□□ -0.18
PDGFB-201ENST00000331163 LRRC46Q96FV0 321 aa13.9□□□□□ -0.18
PDGFB-201ENST00000331163 NMNAT2Q9BZQ4 307 aa13.9□□□□□ -0.18
PDGFB-201ENST00000331163 HRASLSQ9HDD0 168 aa13.9□□□□□ -0.18
PDGFB-201ENST00000331163 OSGIN2Q9Y236 505 aa13.9□□□□□ -0.18
PDGFB-201ENST00000331163 TIMM10BQ9Y5J6 103 aa13.9□□□□□ -0.18
PDGFB-201ENST00000331163 ZNF17P17021 662 aa13.9□□□□□ -0.18
PDGFB-201ENST00000331163 ANGPTL5Q86XS5 388 aa13.9□□□□□ -0.18
PDGFB-201ENST00000331163 C9orf106Q8NAJ2 232 aa13.9□□□□□ -0.18
PDGFB-201ENST00000331163 ZNF629Q9UEG4 869 aaPredicted RBP13.9□□□□□ -0.18
PDGFB-201ENST00000331163 R4GMQ9 66 aa13.9□□□□□ -0.18
PDGFB-201ENST00000331163 CRYABP02511 175 aaKnown RBP13.89□□□□□ -0.19
PDGFB-201ENST00000331163 THBS2P35442 1172 aa13.89□□□□□ -0.19
PDGFB-201ENST00000331163 KIR3DL2P43630 455 aa13.89□□□□□ -0.19
PDGFB-201ENST00000331163 TBR1Q16650 682 aa13.89□□□□□ -0.19
PDGFB-201ENST00000331163 H3F3CQ6NXT2 135 aa13.89□□□□□ -0.19
PDGFB-201ENST00000331163 STAC2Q6ZMT1 411 aa13.89□□□□□ -0.19
PDGFB-201ENST00000331163 SYS1Q8N2H4 156 aa13.89□□□□□ -0.19
PDGFB-201ENST00000331163 FAM221AA4D161 298 aa13.89□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms