RNA–Protein interactions for RNA: ENST00000330494.11

CHD3-201, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene CHD3, Length 7,328 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-201ENST00000330494 PIGPP57054 158 aa9.12□□□□□ -0.95
CHD3-201ENST00000330494 SRPXP78539 464 aa9.12□□□□□ -0.95
CHD3-201ENST00000330494 ETFDHQ16134 617 aa9.12□□□□□ -0.95
CHD3-201ENST00000330494 TOR2AQ5JU69 321 aa9.12□□□□□ -0.95
CHD3-201ENST00000330494 OR2T2Q6IF00 324 aa9.12□□□□□ -0.95
CHD3-201ENST00000330494 OR10D3Q8NH80 312 aa9.12□□□□□ -0.95
CHD3-201ENST00000330494 SLC7A6Q92536 515 aa9.12□□□□□ -0.95
CHD3-201ENST00000330494 MCHR2Q969V1 340 aa9.12□□□□□ -0.95
CHD3-201ENST00000330494 MOGAT1Q96PD6 335 aa9.12□□□□□ -0.95
CHD3-201ENST00000330494 SIGLEC7Q9Y286 467 aa9.12□□□□□ -0.95
CHD3-201ENST00000330494 LRP5LA4QPB2 252 aa9.12□□□□□ -0.95
CHD3-201ENST00000330494 ZXDAP98168 799 aa9.12□□□□□ -0.95
CHD3-201ENST00000330494 HAGHQ16775 308 aa9.12□□□□□ -0.95
CHD3-201ENST00000330494 DBX2Q6ZNG2 339 aa9.12□□□□□ -0.95
CHD3-201ENST00000330494 OSR2Q8N2R0 312 aa9.12□□□□□ -0.95
CHD3-201ENST00000330494 CPEB3Q8NE35 698 aaKnown RBP9.12□□□□□ -0.95
CHD3-201ENST00000330494 OR4C5Q8NGB2 326 aa9.12□□□□□ -0.95
CHD3-201ENST00000330494 TMEFF2Q9UIK5 374 aaPredicted RBP9.12□□□□□ -0.95
CHD3-201ENST00000330494 HLA-DOBP13765 273 aa9.12□□□□□ -0.95
CHD3-201ENST00000330494 OR1F12Q8NHA8 337 aa9.12□□□□□ -0.95
CHD3-201ENST00000330494 ADAT1Q9BUB4 502 aaKnown RBP9.12□□□□□ -0.95
CHD3-201ENST00000330494 KCNK15Q9H427 330 aa9.12□□□□□ -0.95
CHD3-201ENST00000330494 NRXN2Q9P2S2 1712 aa9.12□□□□□ -0.95
CHD3-201ENST00000330494 OR2F2O95006 317 aa9.12□□□□□ -0.95
CHD3-201ENST00000330494 S100A8P05109 93 aa9.12□□□□□ -0.95
CHD3-201ENST00000330494 SOX8P57073 446 aa9.12□□□□□ -0.95
CHD3-201ENST00000330494 AQP6Q13520 282 aa9.12□□□□□ -0.95
CHD3-201ENST00000330494 GSG1Q2KHT4 349 aa9.12□□□□□ -0.95
CHD3-201ENST00000330494 NECAP1Q8NC96 275 aa9.12□□□□□ -0.95
CHD3-201ENST00000330494 KIAA1456Q9P272 454 aa9.12□□□□□ -0.95
CHD3-201ENST00000330494 LRP3O75074 770 aa9.12□□□□□ -0.95
CHD3-201ENST00000330494 LSRQ86X29 649 aaPredicted RBP9.12□□□□□ -0.95
CHD3-201ENST00000330494 GINS3Q9BRX5 216 aa9.12□□□□□ -0.95
CHD3-201ENST00000330494 DUSP21Q9H596 190 aa9.12□□□□□ -0.95
CHD3-201ENST00000330494 FLRT3Q9NZU0 649 aa9.12□□□□□ -0.95
CHD3-201ENST00000330494 WNK3Q9BYP7 1800 aa9.12□□□□□ -0.95
CHD3-201ENST00000330494 KIR2DS1A0A191URI9 304 aa9.11□□□□□ -0.95
CHD3-201ENST00000330494 SPAARA0A1B0GVQ0 90 aa9.11□□□□□ -0.95
CHD3-201ENST00000330494 NKX2-2O95096 273 aa9.11□□□□□ -0.95
CHD3-201ENST00000330494 CT45A6P0DMU7 189 aa9.11□□□□□ -0.95
CHD3-201ENST00000330494 CT45A5P0DMU8 189 aa9.11□□□□□ -0.95
CHD3-201ENST00000330494 CT45A7P0DMV0 189 aa9.11□□□□□ -0.95
CHD3-201ENST00000330494 CT45A8P0DMV1 189 aa9.11□□□□□ -0.95
CHD3-201ENST00000330494 CT45A9P0DMV2 189 aa9.11□□□□□ -0.95
CHD3-201ENST00000330494 EPXP11678 715 aa9.11□□□□□ -0.95
CHD3-201ENST00000330494 KIR2DS4P43632 304 aa9.11□□□□□ -0.95
CHD3-201ENST00000330494 SSPNQ14714 243 aa9.11□□□□□ -0.95
CHD3-201ENST00000330494 KIR2DS1Q14954 304 aa9.11□□□□□ -0.95
CHD3-201ENST00000330494 C4orf17Q53FE4 359 aa9.11□□□□□ -0.95
CHD3-201ENST00000330494 CT45A2Q5DJT8 189 aa9.11□□□□□ -0.95
CHD3-201ENST00000330494 CT45A1Q5HYN5 189 aa9.11□□□□□ -0.95
CHD3-201ENST00000330494 CT45A3Q8NHU0 189 aa9.11□□□□□ -0.95
CHD3-201ENST00000330494 SEH1LQ96EE3 360 aa9.11□□□□□ -0.95
CHD3-201ENST00000330494 TSPAN32Q96QS1 320 aa9.11□□□□□ -0.95
CHD3-201ENST00000330494 PLSCR3Q9NRY6 295 aa9.11□□□□□ -0.95
CHD3-201ENST00000330494 SIRT3Q9NTG7 399 aaPredicted RBP9.11□□□□□ -0.95
CHD3-201ENST00000330494 AKR7A2O43488 359 aa9.11□□□□□ -0.95
CHD3-201ENST00000330494 C1QBP02746 253 aa9.11□□□□□ -0.95
CHD3-201ENST00000330494 ZNF385DQ9H6B1 395 aa9.11□□□□□ -0.95
CHD3-201ENST00000330494 FBXO8Q9NRD0 319 aa9.11□□□□□ -0.95
CHD3-201ENST00000330494 MTCL1Q9Y4B5 1905 aaKnown RBP9.11□□□□□ -0.95
CHD3-201ENST00000330494 CDKN2AP42771 156 aaKnown RBP9.11□□□□□ -0.95
CHD3-201ENST00000330494 WDR38Q5JTN6 314 aa9.11□□□□□ -0.95
CHD3-201ENST00000330494 THSD4Q6ZMP0 1018 aa9.11□□□□□ -0.95
CHD3-201ENST00000330494 CDC20BQ86Y33 519 aa9.11□□□□□ -0.95
CHD3-201ENST00000330494 C1orf87Q8N0U7 546 aa9.11□□□□□ -0.95
CHD3-201ENST00000330494 SMRP1Q8NCR6 262 aa9.11□□□□□ -0.95
CHD3-201ENST00000330494 OTOSQ8NHW6 89 aa9.11□□□□□ -0.95
CHD3-201ENST00000330494 CMTM2Q8TAZ6 248 aa9.11□□□□□ -0.95
CHD3-201ENST00000330494 PARP14Q460N5 1801 aa9.11□□□□□ -0.95
CHD3-201ENST00000330494 MAP1BP46821 2468 aaKnown RBP9.11□□□□□ -0.95
CHD3-201ENST00000330494 SPTBP11277 2137 aa9.11□□□□□ -0.95
CHD3-201ENST00000330494 H3BP45 60 aa9.11□□□□□ -0.95
CHD3-201ENST00000330494 EVX1P49640 407 aa9.11□□□□□ -0.95
CHD3-201ENST00000330494 AANATQ16613 207 aa9.11□□□□□ -0.95
CHD3-201ENST00000330494 OR2AK2Q8NG84 335 aa9.11□□□□□ -0.95
CHD3-201ENST00000330494 FGF20Q9NP95 211 aaPredicted RBP9.11□□□□□ -0.95
CHD3-201ENST00000330494 ZNHIT1O43257 154 aa9.11□□□□□ -0.95
CHD3-201ENST00000330494 RRASP10301 218 aa9.11□□□□□ -0.95
CHD3-201ENST00000330494 ECI1P42126 302 aa9.11□□□□□ -0.95
CHD3-201ENST00000330494 ASCL1P50553 236 aa9.11□□□□□ -0.95
CHD3-201ENST00000330494 DUS3LQ96G46 650 aaKnown RBP9.11□□□□□ -0.95
CHD3-201ENST00000330494 ZNF205O95201 554 aa9.11□□□□□ -0.95
CHD3-201ENST00000330494 ZNF266Q14584 549 aa9.11□□□□□ -0.95
CHD3-201ENST00000330494 GPNMBQ14956 572 aa9.11□□□□□ -0.95
CHD3-201ENST00000330494 SP6Q3SY56 376 aa9.11□□□□□ -0.95
CHD3-201ENST00000330494 C1QL3Q5VWW1 255 aa9.11□□□□□ -0.95
CHD3-201ENST00000330494 SIGIRRQ6IA17 410 aa9.11□□□□□ -0.95
CHD3-201ENST00000330494 RBMS3Q6XE24 437 aaKnown RBP9.11□□□□□ -0.95
CHD3-201ENST00000330494 KLHDC8BQ8IXV7 354 aa9.11□□□□□ -0.95
CHD3-201ENST00000330494 CISD2Q8N5K1 135 aaKnown RBP9.11□□□□□ -0.95
CHD3-201ENST00000330494 ARRDC5A6NEK1 342 aa9.1□□□□□ -0.95
CHD3-201ENST00000330494 OR5H14A6NHG9 310 aa9.1□□□□□ -0.95
CHD3-201ENST00000330494 MOSPD3O75425 235 aa9.1□□□□□ -0.95
CHD3-201ENST00000330494 UBE2IP63279 158 aaKnown RBP9.1□□□□□ -0.95
CHD3-201ENST00000330494 ZNF85Q03923 595 aa9.1□□□□□ -0.95
CHD3-201ENST00000330494 RNF212Q495C1 297 aa9.1□□□□□ -0.95
CHD3-201ENST00000330494 LCN15Q6UWW0 184 aa9.1□□□□□ -0.95
CHD3-201ENST00000330494 ADPRHL1Q8NDY3 354 aa9.1□□□□□ -0.95
CHD3-201ENST00000330494 PIGMQ9H3S5 423 aa9.1□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms