RNA–Protein interactions for RNA: ENST00000322213.8

SMC1A-201, Transcript of structural maintenance of chromosomes 1A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMC1A, Length 9,784 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC1A-201ENST00000322213 SLC39A5Q6ZMH5 540 aa6.38□□□□□ -1.39
SMC1A-201ENST00000322213 OIT3Q8WWZ8 545 aa6.38□□□□□ -1.39
SMC1A-201ENST00000322213 ATP5SQ99766 215 aa6.38□□□□□ -1.39
SMC1A-201ENST00000322213 Q9N2K0 584 aa6.38□□□□□ -1.39
SMC1A-201ENST00000322213 FKBP11Q9NYL4 201 aa6.38□□□□□ -1.39
SMC1A-201ENST00000322213 MTCH1Q9NZJ7 389 aa6.38□□□□□ -1.39
SMC1A-201ENST00000322213 ZFPL1O95159 310 aa6.38□□□□□ -1.39
SMC1A-201ENST00000322213 AVPR2P30518 371 aa6.38□□□□□ -1.39
SMC1A-201ENST00000322213 NKAIN4Q8IVV8 208 aa6.38□□□□□ -1.39
SMC1A-201ENST00000322213 OR2T10Q8NGZ9 312 aa6.38□□□□□ -1.39
SMC1A-201ENST00000322213 PINX1Q96BK5 328 aaKnown RBP6.38□□□□□ -1.39
SMC1A-201ENST00000322213 PPP1R3EQ9H7J1 279 aa6.38□□□□□ -1.39
SMC1A-201ENST00000322213 TMEM9BQ9NQ34 198 aa6.38□□□□□ -1.39
SMC1A-201ENST00000322213 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP6.37□□□□□ -1.39
SMC1A-201ENST00000322213 TMEM189-UBE2V1I3L0A0 370 aa6.37□□□□□ -1.39
SMC1A-201ENST00000322213 P2RY10O00398 339 aa6.37□□□□□ -1.39
SMC1A-201ENST00000322213 HSD17B6O14756 317 aa6.37□□□□□ -1.39
SMC1A-201ENST00000322213 DLX2Q07687 328 aaPredicted RBP6.37□□□□□ -1.39
SMC1A-201ENST00000322213 IL10RAQ13651 578 aa6.37□□□□□ -1.39
SMC1A-201ENST00000322213 SURF2Q15527 256 aaPredicted RBP6.37□□□□□ -1.39
SMC1A-201ENST00000322213 ZNF660Q6AZW8 331 aaPredicted RBP6.37□□□□□ -1.39
SMC1A-201ENST00000322213 OR5R1Q8NH85 324 aa6.37□□□□□ -1.39
SMC1A-201ENST00000322213 NUBPLQ8TB37 319 aa6.37□□□□□ -1.39
SMC1A-201ENST00000322213 TMEM37Q8WXS4 190 aa6.37□□□□□ -1.39
SMC1A-201ENST00000322213 C2orf88Q9BSF0 95 aa6.37□□□□□ -1.39
SMC1A-201ENST00000322213 OR5V1Q9UGF6 321 aa6.37□□□□□ -1.39
SMC1A-201ENST00000322213 NAT8Q9UHE5 227 aa6.37□□□□□ -1.39
SMC1A-201ENST00000322213 A0A0J9YY10 115 aa6.37□□□□□ -1.39
SMC1A-201ENST00000322213 CT45A8P0DMV1 189 aa6.37□□□□□ -1.39
SMC1A-201ENST00000322213 CT45A9P0DMV2 189 aa6.37□□□□□ -1.39
SMC1A-201ENST00000322213 MUC1P15941 1255 aaPredicted RBP6.37□□□□□ -1.39
SMC1A-201ENST00000322213 DCAF7P61962 342 aa6.37□□□□□ -1.39
SMC1A-201ENST00000322213 CT45A2Q5DJT8 189 aa6.37□□□□□ -1.39
SMC1A-201ENST00000322213 ACER2Q5QJU3 275 aa6.37□□□□□ -1.39
SMC1A-201ENST00000322213 Q7L0L9 218 aa6.37□□□□□ -1.39
SMC1A-201ENST00000322213 MRPL21Q7Z2W9 205 aaKnown RBP6.37□□□□□ -1.39
SMC1A-201ENST00000322213 ZNF511Q8NB15 262 aa6.37□□□□□ -1.39
SMC1A-201ENST00000322213 NAGKQ9UJ70 344 aa6.37□□□□□ -1.39
SMC1A-201ENST00000322213 H3BQ15 152 aa6.37□□□□□ -1.39
SMC1A-201ENST00000322213 LANCL1O43813 399 aa6.37□□□□□ -1.39
SMC1A-201ENST00000322213 ADAMTS4O75173 837 aa6.37□□□□□ -1.39
SMC1A-201ENST00000322213 SOD2P04179 222 aa6.37□□□□□ -1.39
SMC1A-201ENST00000322213 S100A7P31151 101 aa6.37□□□□□ -1.39
SMC1A-201ENST00000322213 GABREP78334 506 aa6.37□□□□□ -1.39
SMC1A-201ENST00000322213 DOK3Q7L591 496 aa6.37□□□□□ -1.39
SMC1A-201ENST00000322213 MMP21Q8N119 569 aa6.37□□□□□ -1.39
SMC1A-201ENST00000322213 OR4A16Q8NH70 328 aa6.37□□□□□ -1.39
SMC1A-201ENST00000322213 PGA3P0DJD8 388 aa6.37□□□□□ -1.39
SMC1A-201ENST00000322213 TBXA2RP21731 343 aa6.37□□□□□ -1.39
SMC1A-201ENST00000322213 GUCA2AQ02747 115 aa6.37□□□□□ -1.39
SMC1A-201ENST00000322213 PHF19Q5T6S3 580 aa6.37□□□□□ -1.39
SMC1A-201ENST00000322213 LRP11Q86VZ4 500 aa6.37□□□□□ -1.39
SMC1A-201ENST00000322213 MISPQ8IVT2 679 aa6.37□□□□□ -1.39
SMC1A-201ENST00000322213 FBXL17Q9UF56 701 aa6.37□□□□□ -1.39
SMC1A-201ENST00000322213 M0R1X1 148 aa6.37□□□□□ -1.39
SMC1A-201ENST00000322213 ZNF207O43670 478 aaKnown RBP6.37□□□□□ -1.39
SMC1A-201ENST00000322213 RGRP47804 291 aa6.37□□□□□ -1.39
SMC1A-201ENST00000322213 OR1D4P47884 311 aa6.37□□□□□ -1.39
SMC1A-201ENST00000322213 CATR1Q13166 79 aa6.37□□□□□ -1.39
SMC1A-201ENST00000322213 SMAD2Q15796 467 aaKnown RBP6.37□□□□□ -1.39
SMC1A-201ENST00000322213 CCDC74AQ96AQ1 378 aa6.37□□□□□ -1.39
SMC1A-201ENST00000322213 JAM3Q9BX67 310 aa6.37□□□□□ -1.39
SMC1A-201ENST00000322213 ASCL3Q9NQ33 180 aa6.37□□□□□ -1.39
SMC1A-201ENST00000322213 ZNF737O75373 536 aa6.37□□□□□ -1.39
SMC1A-201ENST00000322213 HIST1H1BP16401 226 aaKnown RBP6.37□□□□□ -1.39
SMC1A-201ENST00000322213 ERVFRD-1P60508 538 aa6.37□□□□□ -1.39
SMC1A-201ENST00000322213 SYT9Q86SS6 491 aa6.37□□□□□ -1.39
SMC1A-201ENST00000322213 TMEM151BQ8IW70 566 aa6.37□□□□□ -1.39
SMC1A-201ENST00000322213 PUSL1Q8N0Z8 303 aaKnown RBP6.37□□□□□ -1.39
SMC1A-201ENST00000322213 CHST14Q8NCH0 376 aa6.37□□□□□ -1.39
SMC1A-201ENST00000322213 SLC16A11Q8NCK7 471 aa6.37□□□□□ -1.39
SMC1A-201ENST00000322213 OR5D18Q8NGL1 313 aa6.37□□□□□ -1.39
SMC1A-201ENST00000322213 PELI1Q96FA3 418 aa6.37□□□□□ -1.39
SMC1A-201ENST00000322213 ADOQ96SZ5 270 aa6.37□□□□□ -1.39
SMC1A-201ENST00000322213 ANGPTL4Q9BY76 406 aa6.37□□□□□ -1.39
SMC1A-201ENST00000322213 KCNMB2Q9Y691 235 aa6.37□□□□□ -1.39
SMC1A-201ENST00000322213 OR7C1O76099 320 aaPredicted RBP6.37□□□□□ -1.39
SMC1A-201ENST00000322213 SNAI1O95863 264 aaPredicted RBP6.37□□□□□ -1.39
SMC1A-201ENST00000322213 F12P00748 615 aaPredicted RBP6.37□□□□□ -1.39
SMC1A-201ENST00000322213 SLC25A1P53007 311 aa6.37□□□□□ -1.39
SMC1A-201ENST00000322213 PAX5Q02548 391 aa6.37□□□□□ -1.39
SMC1A-201ENST00000322213 IL13RA2Q14627 380 aa6.37□□□□□ -1.39
SMC1A-201ENST00000322213 DGAT2L6Q6ZPD8 337 aa6.37□□□□□ -1.39
SMC1A-201ENST00000322213 GPR32P1Q8NGA4 272 aa6.37□□□□□ -1.39
SMC1A-201ENST00000322213 OR11G2Q8NGC1 345 aa6.37□□□□□ -1.39
SMC1A-201ENST00000322213 SMIM12Q96EX1 92 aa6.37□□□□□ -1.39
SMC1A-201ENST00000322213 TXNRD2Q9NNW7 524 aa6.37□□□□□ -1.39
SMC1A-201ENST00000322213 FBXO4Q9UKT5 387 aa6.37□□□□□ -1.39
SMC1A-201ENST00000322213 FAM208BQ5VWN6 2430 aa6.37□□□□□ -1.39
SMC1A-201ENST00000322213 MAP1LC3B2A6NCE7 125 aa6.37□□□□□ -1.39
SMC1A-201ENST00000322213 IGLV3-25P01717 112 aa6.37□□□□□ -1.39
SMC1A-201ENST00000322213 TMEM33P57088 247 aa6.37□□□□□ -1.39
SMC1A-201ENST00000322213 LCN15Q6UWW0 184 aa6.37□□□□□ -1.39
SMC1A-201ENST00000322213 UBE3DQ7Z6J8 389 aa6.37□□□□□ -1.39
SMC1A-201ENST00000322213 OR5C1Q8NGR4 320 aa6.37□□□□□ -1.39
SMC1A-201ENST00000322213 PRRX2Q99811 253 aa6.37□□□□□ -1.39
SMC1A-201ENST00000322213 MAP1LC3BQ9GZQ8 125 aa6.37□□□□□ -1.39
SMC1A-201ENST00000322213 PLEK2Q9NYT0 353 aa6.37□□□□□ -1.39
SMC1A-201ENST00000322213 KCND3Q9UK17 655 aa6.37□□□□□ -1.39
SMC1A-201ENST00000322213 PIAS3Q9Y6X2 628 aa6.37□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms