RNA–Protein interactions for RNA: ENST00000314759.5

SKA3-202, Transcript of spindle and kinetochore associated complex subunit 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SKA3, Length 2,919 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA3-202ENST00000314759 MT-ND4LP03901 98 aa11.87□□□□□ -0.51
SKA3-202ENST00000314759 HOXB5P09067 269 aa11.87□□□□□ -0.51
SKA3-202ENST00000314759 ZNF17P17021 662 aa11.87□□□□□ -0.51
SKA3-202ENST00000314759 P2RY4P51582 365 aa11.87□□□□□ -0.51
SKA3-202ENST00000314759 CCR5P51681 352 aa11.87□□□□□ -0.51
SKA3-202ENST00000314759 S100A10P60903 97 aa11.87□□□□□ -0.51
SKA3-202ENST00000314759 RNF212Q495C1 297 aa11.87□□□□□ -0.51
SKA3-202ENST00000314759 AWAT1Q58HT5 328 aa11.87□□□□□ -0.51
SKA3-202ENST00000314759 NCMAPQ5T1S8 102 aa11.87□□□□□ -0.51
SKA3-202ENST00000314759 ADAM5Q6NVV9 412 aa11.87□□□□□ -0.51
SKA3-202ENST00000314759 Q7L0L9 218 aa11.87□□□□□ -0.51
SKA3-202ENST00000314759 ABHD12BQ7Z5M8 362 aaPredicted RBP11.87□□□□□ -0.51
SKA3-202ENST00000314759 COMMD2Q86X83 199 aa11.87□□□□□ -0.51
SKA3-202ENST00000314759 TMEM234Q8WY98 164 aa11.87□□□□□ -0.51
SKA3-202ENST00000314759 C5orf34Q96MH7 638 aa11.87□□□□□ -0.51
SKA3-202ENST00000314759 CDCA3Q99618 268 aaPredicted RBP11.87□□□□□ -0.51
SKA3-202ENST00000314759 CHST11Q9NPF2 352 aa11.87□□□□□ -0.51
SKA3-202ENST00000314759 ZNF319Q9P2F9 582 aa11.87□□□□□ -0.51
SKA3-202ENST00000314759 SUSD2Q9UGT4 822 aa11.87□□□□□ -0.51
SKA3-202ENST00000314759 C7orf77A4D0Y5 90 aa11.87□□□□□ -0.51
SKA3-202ENST00000314759 AMY2BP19961 511 aa11.87□□□□□ -0.51
SKA3-202ENST00000314759 DMRTC1Q5HYR2 192 aa11.87□□□□□ -0.51
SKA3-202ENST00000314759 C9orf152Q5JTZ5 239 aa11.87□□□□□ -0.51
SKA3-202ENST00000314759 MTIF3Q9H2K0 278 aaKnown RBP11.87□□□□□ -0.51
SKA3-202ENST00000314759 OSGIN2Q9Y236 505 aa11.87□□□□□ -0.51
SKA3-202ENST00000314759 VDAC3Q9Y277 283 aa11.87□□□□□ -0.51
SKA3-202ENST00000314759 LHFPL6Q9Y693 200 aa11.87□□□□□ -0.51
SKA3-202ENST00000314759 LILRA5A6NI73 299 aa11.86□□□□□ -0.51
SKA3-202ENST00000314759 NPIPB13A6NJU9 1138 aa11.86□□□□□ -0.51
SKA3-202ENST00000314759 NPIPB4C9JG80 1138 aa11.86□□□□□ -0.51
SKA3-202ENST00000314759 CRTAPO75718 401 aaPredicted RBP11.86□□□□□ -0.51
SKA3-202ENST00000314759 ARG1P05089 322 aa11.86□□□□□ -0.51
SKA3-202ENST00000314759 HKR1P10072 659 aa11.86□□□□□ -0.51
SKA3-202ENST00000314759 FOXL2P58012 376 aa11.86□□□□□ -0.51
SKA3-202ENST00000314759 SPEM2Q0P670 501 aa11.86□□□□□ -0.51
SKA3-202ENST00000314759 HYAL1Q12794 435 aa11.86□□□□□ -0.51
SKA3-202ENST00000314759 OR2A2Q6IF42 318 aa11.86□□□□□ -0.51
SKA3-202ENST00000314759 Q6ZRG5 221 aa11.86□□□□□ -0.51
SKA3-202ENST00000314759 INTS12Q96CB8 462 aaKnown RBP11.86□□□□□ -0.51
SKA3-202ENST00000314759 SCGB3A2Q96PL1 93 aa11.86□□□□□ -0.51
SKA3-202ENST00000314759 WDR77Q9BQA1 342 aaPredicted RBP11.86□□□□□ -0.51
SKA3-202ENST00000314759 SHISA8B8ZZ34 492 aa11.86□□□□□ -0.51
SKA3-202ENST00000314759 SFTPBP07988 381 aa11.86□□□□□ -0.51
SKA3-202ENST00000314759 PET100P0DJ07 73 aa11.86□□□□□ -0.51
SKA3-202ENST00000314759 PRF1P14222 555 aa11.86□□□□□ -0.51
SKA3-202ENST00000314759 LAP3P28838 519 aa11.86□□□□□ -0.51
SKA3-202ENST00000314759 DVL1P1P54792 670 aaPredicted RBP11.86□□□□□ -0.51
SKA3-202ENST00000314759 ARFRP1Q13795 201 aa11.86□□□□□ -0.51
SKA3-202ENST00000314759 LANCL3Q6ZV70 420 aa11.86□□□□□ -0.51
SKA3-202ENST00000314759 FAM24BQ8N5W8 94 aa11.86□□□□□ -0.51
SKA3-202ENST00000314759 MAFIPQ8WZ33 124 aa11.86□□□□□ -0.51
SKA3-202ENST00000314759 C8orf33Q9H7E9 229 aaPredicted RBP11.86□□□□□ -0.51
SKA3-202ENST00000314759 GPR84Q9NQS5 396 aa11.86□□□□□ -0.51
SKA3-202ENST00000314759 MMP17Q9ULZ9 603 aa11.86□□□□□ -0.51
SKA3-202ENST00000314759 H3BML4 177 aa11.85□□□□□ -0.51
SKA3-202ENST00000314759 PPIHO43447 177 aaKnown RBP11.85□□□□□ -0.51
SKA3-202ENST00000314759 RAB5AP20339 215 aa11.85□□□□□ -0.51
SKA3-202ENST00000314759 OR3A2P47893 321 aa11.85□□□□□ -0.51
SKA3-202ENST00000314759 DHPSP49366 369 aaPredicted RBP11.85□□□□□ -0.51
SKA3-202ENST00000314759 SULT1A2P50226 295 aa11.85□□□□□ -0.51
SKA3-202ENST00000314759 MFAP5Q13361 173 aa11.85□□□□□ -0.51
SKA3-202ENST00000314759 EIF5AL1Q6IS14 154 aaKnown RBP11.85□□□□□ -0.51
SKA3-202ENST00000314759 GKN2Q86XP6 184 aa11.85□□□□□ -0.51
SKA3-202ENST00000314759 OR8B12Q8NGG6 310 aa11.85□□□□□ -0.51
SKA3-202ENST00000314759 OR56B1Q8NGI3 324 aa11.85□□□□□ -0.51
SKA3-202ENST00000314759 LMX1AQ8TE12 382 aa11.85□□□□□ -0.51
SKA3-202ENST00000314759 FAM71F1Q96KD3 344 aaPredicted RBP11.85□□□□□ -0.51
SKA3-202ENST00000314759 MRPL13Q9BYD1 178 aaKnown RBP11.85□□□□□ -0.51
SKA3-202ENST00000314759 VN1R1Q9GZP7 353 aa11.85□□□□□ -0.51
SKA3-202ENST00000314759 SERINC1Q9NRX5 453 aa11.85□□□□□ -0.51
SKA3-202ENST00000314759 KLHL13Q9P2N7 655 aa11.85□□□□□ -0.51
SKA3-202ENST00000314759 B3GAT1Q9P2W7 334 aa11.85□□□□□ -0.51
SKA3-202ENST00000314759 ANKUB1A6NFN9 424 aa11.85□□□□□ -0.51
SKA3-202ENST00000314759 TAAR5O14804 337 aa11.85□□□□□ -0.51
SKA3-202ENST00000314759 HCKP08631 526 aa11.85□□□□□ -0.51
SKA3-202ENST00000314759 FBP1P09467 338 aa11.85□□□□□ -0.51
SKA3-202ENST00000314759 ZNF708P17019 499 aa11.85□□□□□ -0.51
SKA3-202ENST00000314759 CDAP32320 146 aa11.85□□□□□ -0.51
SKA3-202ENST00000314759 SNU13P55769 128 aaKnown RBP11.85□□□□□ -0.51
SKA3-202ENST00000314759 FBXW4P57775 412 aa11.85□□□□□ -0.51
SKA3-202ENST00000314759 EIF5AP63241 154 aaKnown RBP11.85□□□□□ -0.51
SKA3-202ENST00000314759 HSD11B2P80365 405 aa11.85□□□□□ -0.51
SKA3-202ENST00000314759 OR2B11Q5JQS5 317 aa11.85□□□□□ -0.51
SKA3-202ENST00000314759 ST8SIA1Q92185 356 aa11.85□□□□□ -0.51
SKA3-202ENST00000314759 TMEM106CQ9BVX2 250 aa11.85□□□□□ -0.51
SKA3-202ENST00000314759 CHRNA10Q9GZZ6 450 aa11.85□□□□□ -0.51
SKA3-202ENST00000314759 UCK1Q9HA47 277 aa11.85□□□□□ -0.51
SKA3-202ENST00000314759 TNFSF12-TNFSF13A0A0A6YY99 330 aa11.84□□□□□ -0.51
SKA3-202ENST00000314759 IGHV3-20A0A0C4DH32 117 aa11.84□□□□□ -0.51
SKA3-202ENST00000314759 A0A1W2PPC4 97 aa11.84□□□□□ -0.51
SKA3-202ENST00000314759 LIPT2A6NK58 231 aa11.84□□□□□ -0.51
SKA3-202ENST00000314759 M0R036 132 aa11.84□□□□□ -0.51
SKA3-202ENST00000314759 KNG1P01042 644 aa11.84□□□□□ -0.51
SKA3-202ENST00000314759 EIF2S3P41091 472 aaKnown RBP11.84□□□□□ -0.51
SKA3-202ENST00000314759 APOBEC1P41238 236 aaKnown RBP11.84□□□□□ -0.51
SKA3-202ENST00000314759 ZNF121P58317 390 aaPredicted RBP11.84□□□□□ -0.51
SKA3-202ENST00000314759 CSNK2A1P68400 391 aaPredicted RBP11.84□□□□□ -0.51
SKA3-202ENST00000314759 DLX2Q07687 328 aaPredicted RBP11.84□□□□□ -0.51
SKA3-202ENST00000314759 C1orf189Q5VU69 101 aa11.84□□□□□ -0.51
SKA3-202ENST00000314759 TMEM268Q5VZI3 342 aa11.84□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms