RNA–Protein interactions for RNA: ENST00000314289.12

RNF4-201, Transcript of ring finger protein 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RNF4, Length 3,088 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-201ENST00000314289 ZNF716A6NP11 495 aa10.89□□□□□ -0.67
RNF4-201ENST00000314289 LIPCP11150 499 aa10.89□□□□□ -0.67
RNF4-201ENST00000314289 CNR1P21554 472 aa10.89□□□□□ -0.67
RNF4-201ENST00000314289 FAM74A3Q4VXF1 159 aa10.89□□□□□ -0.67
RNF4-201ENST00000314289 ZNF660Q6AZW8 331 aaPredicted RBP10.89□□□□□ -0.67
RNF4-201ENST00000314289 ELP2Q6IA86 826 aa10.89□□□□□ -0.67
RNF4-201ENST00000314289 GLIPR1L1Q6UWM5 242 aa10.89□□□□□ -0.67
RNF4-201ENST00000314289 CD163Q86VB7 1156 aa10.89□□□□□ -0.67
RNF4-201ENST00000314289 OR5AS1Q8N127 324 aa10.89□□□□□ -0.67
RNF4-201ENST00000314289 OR10K1Q8NGX5 313 aa10.89□□□□□ -0.67
RNF4-201ENST00000314289 OR2V1Q8NHB1 315 aa10.89□□□□□ -0.67
RNF4-201ENST00000314289 PNPLA2Q96AD5 504 aa10.89□□□□□ -0.67
RNF4-201ENST00000314289 GLS2Q9UI32 602 aa10.89□□□□□ -0.67
RNF4-201ENST00000314289 IGKV1-9A0A0C4DH69 117 aa10.89□□□□□ -0.67
RNF4-201ENST00000314289 OR6C65A6NJZ3 312 aa10.89□□□□□ -0.67
RNF4-201ENST00000314289 MRPS10P82664 201 aaKnown RBP10.89□□□□□ -0.67
RNF4-201ENST00000314289 HGFACQ04756 655 aa10.89□□□□□ -0.67
RNF4-201ENST00000314289 CEACAM16Q2WEN9 425 aa10.89□□□□□ -0.67
RNF4-201ENST00000314289 C4orf46Q504U0 113 aa10.89□□□□□ -0.67
RNF4-201ENST00000314289 C1orf100Q5SVJ3 147 aa10.89□□□□□ -0.67
RNF4-201ENST00000314289 VASH2Q86V25 355 aa10.89□□□□□ -0.67
RNF4-201ENST00000314289 SLC22A24Q8N4F4 322 aa10.89□□□□□ -0.67
RNF4-201ENST00000314289 MRPS24Q96EL2 167 aaKnown RBP10.89□□□□□ -0.67
RNF4-201ENST00000314289 LRRC46Q96FV0 321 aa10.89□□□□□ -0.67
RNF4-201ENST00000314289 TMPRSS13Q9BYE2 586 aa10.89□□□□□ -0.67
RNF4-201ENST00000314289 SELENOIQ9C0D9 397 aa10.89□□□□□ -0.67
RNF4-201ENST00000314289 MFFQ9GZY8 342 aa10.89□□□□□ -0.67
RNF4-201ENST00000314289 PARD6AQ9NPB6 346 aa10.89□□□□□ -0.67
RNF4-201ENST00000314289 MUC6Q6W4X9 2439 aa10.89□□□□□ -0.67
RNF4-201ENST00000314289 ARGFXA6NJG6 315 aa10.88□□□□□ -0.67
RNF4-201ENST00000314289 LDLRAD4O15165 306 aa10.88□□□□□ -0.67
RNF4-201ENST00000314289 MPIG6BO95866 241 aa10.88□□□□□ -0.67
RNF4-201ENST00000314289 ZNF84P51523 738 aa10.88□□□□□ -0.67
RNF4-201ENST00000314289 AKR1D1P51857 326 aa10.88□□□□□ -0.67
RNF4-201ENST00000314289 ZNF169Q14929 603 aaPredicted RBP10.88□□□□□ -0.67
RNF4-201ENST00000314289 KCNMB1Q16558 191 aa10.88□□□□□ -0.67
RNF4-201ENST00000314289 SCGB2B2Q4G0G5 96 aa10.88□□□□□ -0.67
RNF4-201ENST00000314289 C10orf128Q5T292 105 aa10.88□□□□□ -0.67
RNF4-201ENST00000314289 TMPRSS7Q7RTY8 843 aa10.88□□□□□ -0.67
RNF4-201ENST00000314289 C1QL2Q7Z5L3 287 aa10.88□□□□□ -0.67
RNF4-201ENST00000314289 CDH26Q8IXH8 852 aa10.88□□□□□ -0.67
RNF4-201ENST00000314289 C20orf196Q8IYI0 205 aa10.88□□□□□ -0.67
RNF4-201ENST00000314289 MUC20Q8N307 709 aaPredicted RBP10.88□□□□□ -0.67
RNF4-201ENST00000314289 NKAIN3Q8N8D7 197 aa10.88□□□□□ -0.67
RNF4-201ENST00000314289 PIGTQ969N2 578 aa10.88□□□□□ -0.67
RNF4-201ENST00000314289 MED9Q9NWA0 146 aa10.88□□□□□ -0.67
RNF4-201ENST00000314289 KLK13Q9UKR3 277 aa10.88□□□□□ -0.67
RNF4-201ENST00000314289 LOC390937A0A1W2PQ73 354 aa10.88□□□□□ -0.67
RNF4-201ENST00000314289 SNRPGP15A8MWD9 76 aa10.88□□□□□ -0.67
RNF4-201ENST00000314289 STMND1H3BQB6 276 aa10.88□□□□□ -0.67
RNF4-201ENST00000314289 M0R135 149 aa10.88□□□□□ -0.67
RNF4-201ENST00000314289 RAB27BO00194 218 aa10.88□□□□□ -0.67
RNF4-201ENST00000314289 GFRA1P56159 465 aa10.88□□□□□ -0.67
RNF4-201ENST00000314289 LSM6P62312 80 aaKnown RBP10.88□□□□□ -0.67
RNF4-201ENST00000314289 CSRP2Q16527 193 aa10.88□□□□□ -0.67
RNF4-201ENST00000314289 STEAP1BQ6NZ63 245 aa10.88□□□□□ -0.67
RNF4-201ENST00000314289 TMED4Q7Z7H5 227 aa10.88□□□□□ -0.67
RNF4-201ENST00000314289 GPR137CQ8N3F9 429 aa10.88□□□□□ -0.67
RNF4-201ENST00000314289 CLEC1AQ8NC01 280 aa10.88□□□□□ -0.67
RNF4-201ENST00000314289 OR2AK2Q8NG84 335 aa10.88□□□□□ -0.67
RNF4-201ENST00000314289 OR10Z1Q8NGY1 313 aa10.88□□□□□ -0.67
RNF4-201ENST00000314289 GPX8Q8TED1 209 aa10.88□□□□□ -0.67
RNF4-201ENST00000314289 ZNF799Q96GE5 643 aa10.88□□□□□ -0.67
RNF4-201ENST00000314289 ADGRG7Q96K78 797 aa10.88□□□□□ -0.67
RNF4-201ENST00000314289 CSAG2Q9Y5P2 127 aa10.88□□□□□ -0.67
RNF4-201ENST00000314289 TERTO14746 1132 aaKnown RBP10.88□□□□□ -0.67
RNF4-201ENST00000314289 TMEM127O75204 238 aa10.88□□□□□ -0.67
RNF4-201ENST00000314289 TPPPO94811 219 aa10.88□□□□□ -0.67
RNF4-201ENST00000314289 IL5P05113 134 aa10.88□□□□□ -0.67
RNF4-201ENST00000314289 ZNF32P17041 273 aa10.88□□□□□ -0.67
RNF4-201ENST00000314289 SCAND1P57086 179 aa10.88□□□□□ -0.67
RNF4-201ENST00000314289 GRB2P62993 217 aaKnown RBP10.88□□□□□ -0.67
RNF4-201ENST00000314289 PLGLB1Q02325 96 aa10.88□□□□□ -0.67
RNF4-201ENST00000314289 HSD17B13Q7Z5P4 300 aaPredicted RBP10.88□□□□□ -0.67
RNF4-201ENST00000314289 GABRG1Q8N1C3 465 aa10.88□□□□□ -0.67
RNF4-201ENST00000314289 OR5M9Q8NGP3 310 aa10.88□□□□□ -0.67
RNF4-201ENST00000314289 ADAMTS17Q8TE56 1095 aa10.88□□□□□ -0.67
RNF4-201ENST00000314289 KCNE4Q8WWG9 221 aa10.88□□□□□ -0.67
RNF4-201ENST00000314289 GPR87Q9BY21 358 aa10.88□□□□□ -0.67
RNF4-201ENST00000314289 BOKQ9UMX3 212 aaPredicted RBP10.88□□□□□ -0.67
RNF4-201ENST00000314289 MRPS28Q9Y2Q9 187 aaKnown RBP10.88□□□□□ -0.67
RNF4-201ENST00000314289 A0A096LPE4 126 aa10.87□□□□□ -0.67
RNF4-201ENST00000314289 A0A1W2PPZ6 126 aa10.87□□□□□ -0.67
RNF4-201ENST00000314289 CSF1P09603 554 aa10.87□□□□□ -0.67
RNF4-201ENST00000314289 CFPP27918 469 aa10.87□□□□□ -0.67
RNF4-201ENST00000314289 FOXG1P55316 489 aaPredicted RBP10.87□□□□□ -0.67
RNF4-201ENST00000314289 GMFBP60983 142 aa10.87□□□□□ -0.67
RNF4-201ENST00000314289 RBMS2Q15434 407 aaKnown RBP10.87□□□□□ -0.67
RNF4-201ENST00000314289 CDNFQ49AH0 187 aa10.87□□□□□ -0.67
RNF4-201ENST00000314289 DNM1P46Q6ZS02 220 aa10.87□□□□□ -0.67
RNF4-201ENST00000314289 LINC00518Q8N0U6 118 aa10.87□□□□□ -0.67
RNF4-201ENST00000314289 FNDC9Q8TBE3 224 aa10.87□□□□□ -0.67
RNF4-201ENST00000314289 TTTY12Q9BZ98 90 aa10.87□□□□□ -0.67
RNF4-201ENST00000314289 ZNF703Q9H7S9 590 aaPredicted RBP10.87□□□□□ -0.67
RNF4-201ENST00000314289 CALHM2Q9HA72 323 aa10.87□□□□□ -0.67
RNF4-201ENST00000314289 ELL3Q9HB65 397 aaPredicted RBP10.87□□□□□ -0.67
RNF4-201ENST00000314289 TAS2R3Q9NYW6 316 aa10.87□□□□□ -0.67
RNF4-201ENST00000314289 PIGLQ9Y2B2 252 aa10.87□□□□□ -0.67
RNF4-201ENST00000314289 TTLL8A6PVC2 850 aa10.87□□□□□ -0.67
RNF4-201ENST00000314289 HMSDA8MTL9 139 aa10.87□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms