RNA–Protein interactions for RNA: ENST00000304236.2

RAB40A-201, Transcript of RAB40A, member RAS oncogene family, humanhuman

APPRIS P1 TSL 2 BASIC

Gene RAB40A, Length 1,969 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40A-201ENST00000304236 OR4K15Q8NH41 348 aa12.49□□□□□ -0.41
RAB40A-201ENST00000304236 MR1Q95460 341 aa12.49□□□□□ -0.41
RAB40A-201ENST00000304236 INTS12Q96CB8 462 aaKnown RBP12.49□□□□□ -0.41
RAB40A-201ENST00000304236 RAB3CQ96E17 227 aa12.49□□□□□ -0.41
RAB40A-201ENST00000304236 PGAM5Q96HS1 289 aa12.49□□□□□ -0.41
RAB40A-201ENST00000304236 TMEM41AQ96HV5 264 aa12.49□□□□□ -0.41
RAB40A-201ENST00000304236 TMEM59Q9BXS4 323 aa12.49□□□□□ -0.41
RAB40A-201ENST00000304236 CST11Q9H112 138 aa12.49□□□□□ -0.41
RAB40A-201ENST00000304236 SLC25A32Q9H2D1 315 aa12.49□□□□□ -0.41
RAB40A-201ENST00000304236 NELFAQ9H3P2 528 aa12.49□□□□□ -0.41
RAB40A-201ENST00000304236 AKIRIN1Q9H9L7 192 aaPredicted RBP12.49□□□□□ -0.41
RAB40A-201ENST00000304236 LOXL2Q9Y4K0 774 aa12.49□□□□□ -0.41
RAB40A-201ENST00000304236 SLC2A1P11166 492 aa12.48□□□□□ -0.41
RAB40A-201ENST00000304236 COX6A1P12074 109 aa12.48□□□□□ -0.41
RAB40A-201ENST00000304236 HIST1H1DP16402 221 aaKnown RBP12.48□□□□□ -0.41
RAB40A-201ENST00000304236 THBS4P35443 961 aa12.48□□□□□ -0.41
RAB40A-201ENST00000304236 SSR4P51571 173 aa12.48□□□□□ -0.41
RAB40A-201ENST00000304236 CSNK2A1P68400 391 aaPredicted RBP12.48□□□□□ -0.41
RAB40A-201ENST00000304236 ECH1Q13011 328 aa12.48□□□□□ -0.41
RAB40A-201ENST00000304236 PPP1R1AQ13522 171 aa12.48□□□□□ -0.41
RAB40A-201ENST00000304236 VAX1Q5SQQ9 334 aa12.48□□□□□ -0.41
RAB40A-201ENST00000304236 OR52W1Q6IF63 320 aa12.48□□□□□ -0.41
RAB40A-201ENST00000304236 C11orf87Q6NUJ2 197 aa12.48□□□□□ -0.41
RAB40A-201ENST00000304236 C17orf107Q6ZR85 190 aa12.48□□□□□ -0.41
RAB40A-201ENST00000304236 ARRDC1Q8N5I2 433 aa12.48□□□□□ -0.41
RAB40A-201ENST00000304236 AGBL5Q8NDL9 886 aa12.48□□□□□ -0.41
RAB40A-201ENST00000304236 SSC4DQ8WTU2 575 aa12.48□□□□□ -0.41
RAB40A-201ENST00000304236 NTNG2Q96CW9 530 aa12.48□□□□□ -0.41
RAB40A-201ENST00000304236 C1orf147Q96MC9 270 aaPredicted RBP12.48□□□□□ -0.41
RAB40A-201ENST00000304236 SCGB3A2Q96PL1 93 aa12.48□□□□□ -0.41
RAB40A-201ENST00000304236 GPER1Q99527 375 aa12.48□□□□□ -0.41
RAB40A-201ENST00000304236 ZNF416Q9BWM5 594 aa12.48□□□□□ -0.41
RAB40A-201ENST00000304236 ZNF319Q9P2F9 582 aa12.48□□□□□ -0.41
RAB40A-201ENST00000304236 PTRH2Q9Y3E5 179 aaKnown RBP12.48□□□□□ -0.41
RAB40A-201ENST00000304236 A0A0U1RQV5 110 aa12.47□□□□□ -0.41
RAB40A-201ENST00000304236 KANTRA0A1W2PQU2 76 aa12.47□□□□□ -0.41
RAB40A-201ENST00000304236 KRBOX1C9JBD0 128 aa12.47□□□□□ -0.41
RAB40A-201ENST00000304236 IGLV3-1P01715 115 aa12.47□□□□□ -0.41
RAB40A-201ENST00000304236 UMODP07911 640 aa12.47□□□□□ -0.41
RAB40A-201ENST00000304236 LIFP15018 202 aa12.47□□□□□ -0.41
RAB40A-201ENST00000304236 ZNF17P17021 662 aa12.47□□□□□ -0.41
RAB40A-201ENST00000304236 ALDH3B1P43353 468 aa12.47□□□□□ -0.41
RAB40A-201ENST00000304236 HOGA1Q86XE5 327 aa12.47□□□□□ -0.41
RAB40A-201ENST00000304236 PAQR8Q8TEZ7 354 aa12.47□□□□□ -0.41
RAB40A-201ENST00000304236 MRGPRFQ96AM1 343 aa12.47□□□□□ -0.41
RAB40A-201ENST00000304236 ZNF160Q9HCG1 818 aa12.47□□□□□ -0.41
RAB40A-201ENST00000304236 TNFSF18Q9UNG2 199 aa12.47□□□□□ -0.41
RAB40A-201ENST00000304236 LOC400499M0QZD8 3231 aa12.47□□□□□ -0.41
RAB40A-201ENST00000304236 NPIPA2E9PIF3 369 aa12.47□□□□□ -0.41
RAB40A-201ENST00000304236 NPIPA3F8WFD2 350 aa12.47□□□□□ -0.41
RAB40A-201ENST00000304236 EFSO43281 561 aa12.47□□□□□ -0.41
RAB40A-201ENST00000304236 DUS4LO95620 317 aaKnown RBP12.47□□□□□ -0.41
RAB40A-201ENST00000304236 OR3A4PP47883 348 aa12.47□□□□□ -0.41
RAB40A-201ENST00000304236 ARL6IP1Q15041 203 aa12.47□□□□□ -0.41
RAB40A-201ENST00000304236 ACOT7LQ6ZUV0 252 aa12.47□□□□□ -0.41
RAB40A-201ENST00000304236 HSD17B13Q7Z5P4 300 aaPredicted RBP12.47□□□□□ -0.41
RAB40A-201ENST00000304236 TERB2Q8NHR7 220 aa12.47□□□□□ -0.41
RAB40A-201ENST00000304236 FBXW5Q969U6 566 aa12.47□□□□□ -0.41
RAB40A-201ENST00000304236 C10orf35Q96D05 121 aa12.47□□□□□ -0.41
RAB40A-201ENST00000304236 OCSTAMPQ9BR26 566 aa12.47□□□□□ -0.41
RAB40A-201ENST00000304236 NICN1Q9BSH3 213 aa12.47□□□□□ -0.41
RAB40A-201ENST00000304236 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP12.47□□□□□ -0.41
RAB40A-201ENST00000304236 ZNF230Q9UIE0 474 aaPredicted RBP12.47□□□□□ -0.41
RAB40A-201ENST00000304236 DKKL1Q9UK85 242 aa12.47□□□□□ -0.41
RAB40A-201ENST00000304236 EML6Q6ZMW3 1958 aa12.46□□□□□ -0.41
RAB40A-201ENST00000304236 A0A0A6YYD4 124 aa12.46□□□□□ -0.41
RAB40A-201ENST00000304236 GJE1A6NN92 205 aa12.46□□□□□ -0.41
RAB40A-201ENST00000304236 OR2AT4A6NND4 320 aa12.46□□□□□ -0.41
RAB40A-201ENST00000304236 PMP2P02689 132 aa12.46□□□□□ -0.41
RAB40A-201ENST00000304236 SUCLG1P53597 346 aaKnown RBP12.46□□□□□ -0.41
RAB40A-201ENST00000304236 HIST1H3AP68431 136 aa12.46□□□□□ -0.41
RAB40A-201ENST00000304236 MC2RQ01718 297 aa12.46□□□□□ -0.41
RAB40A-201ENST00000304236 HIST2H3PS2Q5TEC6 136 aa12.46□□□□□ -0.41
RAB40A-201ENST00000304236 RAET1LQ5VY80 246 aa12.46□□□□□ -0.41
RAB40A-201ENST00000304236 Q6ZSR3 168 aa12.46□□□□□ -0.41
RAB40A-201ENST00000304236 HIST2H3AQ71DI3 136 aa12.46□□□□□ -0.41
RAB40A-201ENST00000304236 OVCH2Q7RTZ1 564 aa12.46□□□□□ -0.41
RAB40A-201ENST00000304236 FAM89BQ8N5H3 189 aa12.46□□□□□ -0.41
RAB40A-201ENST00000304236 EIF4E3Q8N5X7 224 aaKnown RBP12.46□□□□□ -0.41
RAB40A-201ENST00000304236 TMEM104Q8NE00 496 aa12.46□□□□□ -0.41
RAB40A-201ENST00000304236 PP6455Q8WZ26 134 aa12.46□□□□□ -0.41
RAB40A-201ENST00000304236 ST8SIA2Q92186 375 aa12.46□□□□□ -0.41
RAB40A-201ENST00000304236 ST8SIA4Q92187 359 aa12.46□□□□□ -0.41
RAB40A-201ENST00000304236 CXorf58Q96LI9 332 aa12.46□□□□□ -0.41
RAB40A-201ENST00000304236 SPACA5Q96QH8 159 aa12.46□□□□□ -0.41
RAB40A-201ENST00000304236 SOX7Q9BT81 388 aa12.46□□□□□ -0.41
RAB40A-201ENST00000304236 OR10A2Q9H208 303 aa12.46□□□□□ -0.41
RAB40A-201ENST00000304236 SH2D2AQ9NP31 389 aa12.46□□□□□ -0.41
RAB40A-201ENST00000304236 KCNMB2Q9Y691 235 aa12.46□□□□□ -0.41
RAB40A-201ENST00000304236 V9GYS6 101 aa12.46□□□□□ -0.41
RAB40A-201ENST00000304236 CEACAM18A8MTB9 384 aa12.45□□□□□ -0.42
RAB40A-201ENST00000304236 SOCS1O15524 211 aa12.45□□□□□ -0.42
RAB40A-201ENST00000304236 DHHO43323 396 aa12.45□□□□□ -0.42
RAB40A-201ENST00000304236 BCL2L11O43521 198 aa12.45□□□□□ -0.42
RAB40A-201ENST00000304236 DNPH1O43598 174 aa12.45□□□□□ -0.42
RAB40A-201ENST00000304236 CRTAPO75718 401 aaPredicted RBP12.45□□□□□ -0.42
RAB40A-201ENST00000304236 IGHEP01854 428 aa12.45□□□□□ -0.42
RAB40A-201ENST00000304236 ZNF84P51523 738 aa12.45□□□□□ -0.42
RAB40A-201ENST00000304236 RAC1P63000 192 aa12.45□□□□□ -0.42
RAB40A-201ENST00000304236 CYCSP99999 105 aaKnown RBP12.45□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms