RNA–Protein interactions for RNA: ENST00000303354.10

SCN9A-201, Transcript of sodium voltage-gated channel alpha subunit 9, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SCN9A, Length 9,786 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN9A-201ENST00000303354 TCTAP57738 103 aa6.97□□□□□ -1.29
SCN9A-201ENST00000303354 FAM53BQ14153 422 aa6.97□□□□□ -1.29
SCN9A-201ENST00000303354 XKR7Q5GH72 579 aa6.97□□□□□ -1.29
SCN9A-201ENST00000303354 OR10P1Q8NGE3 313 aa6.97□□□□□ -1.29
SCN9A-201ENST00000303354 OR8B3Q8NGG8 313 aa6.97□□□□□ -1.29
SCN9A-201ENST00000303354 LINC01560Q8TB33 94 aa6.97□□□□□ -1.29
SCN9A-201ENST00000303354 DUS3LQ96G46 650 aaKnown RBP6.97□□□□□ -1.29
SCN9A-201ENST00000303354 OR8B2Q96RD0 313 aa6.97□□□□□ -1.29
SCN9A-201ENST00000303354 TINAGQ9UJW2 476 aa6.97□□□□□ -1.29
SCN9A-201ENST00000303354 GOLT1BQ9Y3E0 138 aa6.97□□□□□ -1.29
SCN9A-201ENST00000303354 SELENOKQ9Y6D0 94 aa6.97□□□□□ -1.29
SCN9A-201ENST00000303354 ACOT8O14734 319 aa6.97□□□□□ -1.29
SCN9A-201ENST00000303354 SELENOPP49908 381 aa6.97□□□□□ -1.29
SCN9A-201ENST00000303354 H3F3AP84243 136 aa6.97□□□□□ -1.29
SCN9A-201ENST00000303354 INPP5JQ15735 1006 aaPredicted RBP6.97□□□□□ -1.29
SCN9A-201ENST00000303354 LYSMD1Q96S90 227 aa6.97□□□□□ -1.29
SCN9A-201ENST00000303354 TMEM74BQ9NUR3 256 aa6.97□□□□□ -1.29
SCN9A-201ENST00000303354 LAMP3Q9UQV4 416 aa6.97□□□□□ -1.29
SCN9A-201ENST00000303354 SMIM17P0DL12 118 aa6.97□□□□□ -1.29
SCN9A-201ENST00000303354 ACHEP22303 614 aa6.97□□□□□ -1.29
SCN9A-201ENST00000303354 SNRPGP62308 76 aaKnown RBP6.97□□□□□ -1.29
SCN9A-201ENST00000303354 CCL8P80075 99 aa6.97□□□□□ -1.29
SCN9A-201ENST00000303354 DYNLRB2Q8TF09 96 aa6.97□□□□□ -1.29
SCN9A-201ENST00000303354 TMEM171Q8WVE6 324 aa6.97□□□□□ -1.29
SCN9A-201ENST00000303354 SCN11AQ9UI33 1791 aa6.97□□□□□ -1.29
SCN9A-201ENST00000303354 IGKV3D-11A0A0A0MRZ8 115 aa6.96□□□□□ -1.29
SCN9A-201ENST00000303354 ST8SIA5O15466 376 aa6.96□□□□□ -1.29
SCN9A-201ENST00000303354 IGKV3-11P04433 115 aa6.96□□□□□ -1.29
SCN9A-201ENST00000303354 TCRBP04435 133 aa6.96□□□□□ -1.29
SCN9A-201ENST00000303354 ADH4P08319 380 aa6.96□□□□□ -1.29
SCN9A-201ENST00000303354 TNFRSF1AP19438 455 aa6.96□□□□□ -1.29
SCN9A-201ENST00000303354 IL11P20809 199 aa6.96□□□□□ -1.29
SCN9A-201ENST00000303354 SLC17A1Q14916 467 aa6.96□□□□□ -1.29
SCN9A-201ENST00000303354 LGI3Q8N145 548 aa6.96□□□□□ -1.29
SCN9A-201ENST00000303354 TMEM38AQ9H6F2 299 aa6.96□□□□□ -1.29
SCN9A-201ENST00000303354 ZFP64Q9NPA5 681 aa6.96□□□□□ -1.29
SCN9A-201ENST00000303354 AK3Q9UIJ7 227 aa6.96□□□□□ -1.29
SCN9A-201ENST00000303354 NAP1L6A6NFF2 107 aa6.96□□□□□ -1.29
SCN9A-201ENST00000303354 DBX1A6NMT0 343 aa6.96□□□□□ -1.29
SCN9A-201ENST00000303354 FAM87AP0C7U9 286 aa6.96□□□□□ -1.29
SCN9A-201ENST00000303354 FOXO1Q12778 655 aa6.96□□□□□ -1.29
SCN9A-201ENST00000303354 BTN1A1Q13410 526 aa6.96□□□□□ -1.29
SCN9A-201ENST00000303354 MAMSTRQ6ZN01 415 aa6.96□□□□□ -1.29
SCN9A-201ENST00000303354 C6orf201Q7Z4U5 140 aa6.96□□□□□ -1.29
SCN9A-201ENST00000303354 MRGPREQ86SM8 312 aa6.96□□□□□ -1.29
SCN9A-201ENST00000303354 ZNF441Q8N8Z8 693 aa6.96□□□□□ -1.29
SCN9A-201ENST00000303354 DRAXINQ8NBI3 349 aaPredicted RBP6.96□□□□□ -1.29
SCN9A-201ENST00000303354 NT5CQ8TCD5 201 aa6.96□□□□□ -1.29
SCN9A-201ENST00000303354 DYRK2Q92630 601 aa6.96□□□□□ -1.29
SCN9A-201ENST00000303354 SLC6A13Q9NSD5 602 aa6.96□□□□□ -1.29
SCN9A-201ENST00000303354 MYH6P13533 1939 aa6.96□□□□□ -1.3
SCN9A-201ENST00000303354 CST7O76096 145 aa6.96□□□□□ -1.3
SCN9A-201ENST00000303354 LY6DQ14210 128 aa6.96□□□□□ -1.3
SCN9A-201ENST00000303354 SLC25A35Q3KQZ1 300 aa6.96□□□□□ -1.3
SCN9A-201ENST00000303354 C4orf17Q53FE4 359 aa6.96□□□□□ -1.3
SCN9A-201ENST00000303354 ISYNA1Q9NPH2 558 aa6.96□□□□□ -1.3
SCN9A-201ENST00000303354 EXOSC3Q9NQT5 275 aaKnown RBP6.96□□□□□ -1.3
SCN9A-201ENST00000303354 ERRFI1Q9UJM3 462 aaPredicted RBP6.96□□□□□ -1.3
SCN9A-201ENST00000303354 RGPD1P0DJD0 1748 aa6.96□□□□□ -1.3
SCN9A-201ENST00000303354 TXN2Q99757 166 aa6.96□□□□□ -1.3
SCN9A-201ENST00000303354 C11orf54Q9H0W9 315 aaPredicted RBP6.96□□□□□ -1.3
SCN9A-201ENST00000303354 ATPIF1Q9UII2 106 aa6.96□□□□□ -1.3
SCN9A-201ENST00000303354 KDM3BQ7LBC6 1761 aa6.96□□□□□ -1.3
SCN9A-201ENST00000303354 ZNF488Q96MN9 340 aa6.96□□□□□ -1.3
SCN9A-201ENST00000303354 ADGRL4Q9HBW9 690 aa6.96□□□□□ -1.3
SCN9A-201ENST00000303354 DIMT1Q9UNQ2 313 aaKnown RBP6.96□□□□□ -1.3
SCN9A-201ENST00000303354 BCL3P20749 454 aa6.96□□□□□ -1.3
SCN9A-201ENST00000303354 LIMS2Q7Z4I7 341 aa6.96□□□□□ -1.3
SCN9A-201ENST00000303354 C15orf54Q8N8G6 183 aa6.96□□□□□ -1.3
SCN9A-201ENST00000303354 SLC35B4Q969S0 331 aa6.96□□□□□ -1.3
SCN9A-201ENST00000303354 PRR19A6NJB7 356 aa6.96□□□□□ -1.3
SCN9A-201ENST00000303354 IGLV3-25P01717 112 aa6.96□□□□□ -1.3
SCN9A-201ENST00000303354 ACAA2P42765 397 aaKnown RBP6.96□□□□□ -1.3
SCN9A-201ENST00000303354 ACTBL2Q562R1 376 aa6.96□□□□□ -1.3
SCN9A-201ENST00000303354 OR1B1Q8NGR6 318 aa6.96□□□□□ -1.3
SCN9A-201ENST00000303354 GPBAR1Q8TDU6 330 aa6.96□□□□□ -1.3
SCN9A-201ENST00000303354 FGF11Q92914 225 aa6.96□□□□□ -1.3
SCN9A-201ENST00000303354 RABAC1Q9UI14 185 aa6.96□□□□□ -1.3
SCN9A-201ENST00000303354 HMX2A2RU54 273 aa6.95□□□□□ -1.3
SCN9A-201ENST00000303354 LILRA5A6NI73 299 aa6.95□□□□□ -1.3
SCN9A-201ENST00000303354 MGMTP16455 207 aa6.95□□□□□ -1.3
SCN9A-201ENST00000303354 CEBPDP49716 269 aaPredicted RBP6.95□□□□□ -1.3
SCN9A-201ENST00000303354 ZNF620Q6ZNG0 422 aa6.95□□□□□ -1.3
SCN9A-201ENST00000303354 ST8SIA1Q92185 356 aa6.95□□□□□ -1.3
SCN9A-201ENST00000303354 DERL3Q96Q80 235 aa6.95□□□□□ -1.3
SCN9A-201ENST00000303354 PRRX2Q99811 253 aa6.95□□□□□ -1.3
SCN9A-201ENST00000303354 OR2D2Q9H210 308 aa6.95□□□□□ -1.3
SCN9A-201ENST00000303354 AKR1C3P42330 323 aa6.95□□□□□ -1.3
SCN9A-201ENST00000303354 OR3A1P47881 315 aa6.95□□□□□ -1.3
SCN9A-201ENST00000303354 TMPRSS3P57727 454 aa6.95□□□□□ -1.3
SCN9A-201ENST00000303354 ZNF85Q03923 595 aa6.95□□□□□ -1.3
SCN9A-201ENST00000303354 LSAMPQ13449 338 aa6.95□□□□□ -1.3
SCN9A-201ENST00000303354 NANOGP1Q8N7R0 232 aa6.95□□□□□ -1.3
SCN9A-201ENST00000303354 RASL11BQ9BPW5 248 aa6.95□□□□□ -1.3
SCN9A-201ENST00000303354 A0A1B0GTQ1 180 aa6.95□□□□□ -1.3
SCN9A-201ENST00000303354 CD3DP04234 171 aa6.95□□□□□ -1.3
SCN9A-201ENST00000303354 MTNR1BP49286 362 aa6.95□□□□□ -1.3
SCN9A-201ENST00000303354 EIF3IQ13347 325 aaKnown RBP6.95□□□□□ -1.3
SCN9A-201ENST00000303354 KCNRGQ8N5I3 272 aa6.95□□□□□ -1.3
SCN9A-201ENST00000303354 OR2M7Q8NG81 312 aa6.95□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 48.1 ms