RNA–Protein interactions for RNA: ENST00000300862.7

HIF3A-204, Transcript of hypoxia inducible factor 3 subunit alpha, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene HIF3A, Length 2,551 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF3A-204ENST00000300862 DTWD2Q8NBA8 298 aa11.35□□□□□ -0.59
HIF3A-204ENST00000300862 PGAM5Q96HS1 289 aa11.35□□□□□ -0.59
HIF3A-204ENST00000300862 COA4Q9NYJ1 87 aa11.35□□□□□ -0.59
HIF3A-204ENST00000300862 C19orf25Q9UFG5 118 aaPredicted RBP11.35□□□□□ -0.59
HIF3A-204ENST00000300862 PISDQ9UG56 409 aa11.35□□□□□ -0.59
HIF3A-204ENST00000300862 FAHP16930 419 aa11.34□□□□□ -0.59
HIF3A-204ENST00000300862 HIST3H3Q16695 136 aa11.34□□□□□ -0.59
HIF3A-204ENST00000300862 LPCAT3Q6P1A2 487 aa11.34□□□□□ -0.59
HIF3A-204ENST00000300862 ZNF600Q6ZNG1 722 aa11.34□□□□□ -0.59
HIF3A-204ENST00000300862 HOGA1Q86XE5 327 aa11.34□□□□□ -0.59
HIF3A-204ENST00000300862 KCNG3Q8TAE7 436 aa11.34□□□□□ -0.59
HIF3A-204ENST00000300862 ELP5Q8TE02 316 aa11.34□□□□□ -0.59
HIF3A-204ENST00000300862 SLC39A7Q92504 469 aa11.34□□□□□ -0.59
HIF3A-204ENST00000300862 WNT2BQ93097 391 aa11.34□□□□□ -0.59
HIF3A-204ENST00000300862 ZNF837Q96EG3 531 aaPredicted RBP11.34□□□□□ -0.59
HIF3A-204ENST00000300862 RBM24Q9BX46 236 aaKnown RBP11.34□□□□□ -0.59
HIF3A-204ENST00000300862 PIGMQ9H3S5 423 aa11.34□□□□□ -0.59
HIF3A-204ENST00000300862 MOB1AQ9H8S9 216 aa11.34□□□□□ -0.59
HIF3A-204ENST00000300862 SIT1Q9Y3P8 196 aa11.34□□□□□ -0.59
HIF3A-204ENST00000300862 ADAP1O75689 374 aa11.34□□□□□ -0.59
HIF3A-204ENST00000300862 CFIP05156 583 aa11.34□□□□□ -0.59
HIF3A-204ENST00000300862 CCL4P13236 92 aa11.34□□□□□ -0.59
HIF3A-204ENST00000300862 SNTB1Q13884 538 aaKnown RBP11.34□□□□□ -0.59
HIF3A-204ENST00000300862 ADPRHL1Q8NDY3 354 aa11.34□□□□□ -0.59
HIF3A-204ENST00000300862 BHLHE23Q8NDY6 225 aa11.34□□□□□ -0.59
HIF3A-204ENST00000300862 OR14K1Q8NGZ2 314 aa11.34□□□□□ -0.59
HIF3A-204ENST00000300862 TERB2Q8NHR7 220 aa11.34□□□□□ -0.59
HIF3A-204ENST00000300862 CLDN23Q96B33 292 aa11.34□□□□□ -0.59
HIF3A-204ENST00000300862 C5orf66Q9H5L9 145 aa11.34□□□□□ -0.59
HIF3A-204ENST00000300862 ELL3Q9HB65 397 aaPredicted RBP11.34□□□□□ -0.59
HIF3A-204ENST00000300862 ZNF160Q9HCG1 818 aa11.34□□□□□ -0.59
HIF3A-204ENST00000300862 ASF1BQ9NVP2 202 aa11.34□□□□□ -0.59
HIF3A-204ENST00000300862 LHX6Q9UPM6 363 aa11.34□□□□□ -0.59
HIF3A-204ENST00000300862 HDGFL3Q9Y3E1 203 aa11.34□□□□□ -0.59
HIF3A-204ENST00000300862 PTRH2Q9Y3E5 179 aaKnown RBP11.34□□□□□ -0.59
HIF3A-204ENST00000300862 TMEM218A2RU14 115 aa11.33□□□□□ -0.6
HIF3A-204ENST00000300862 F5H0A9 414 aaPredicted RBP11.33□□□□□ -0.6
HIF3A-204ENST00000300862 STMND1H3BQB6 276 aa11.33□□□□□ -0.6
HIF3A-204ENST00000300862 OR2F2O95006 317 aa11.33□□□□□ -0.6
HIF3A-204ENST00000300862 CHRM2P08172 466 aa11.33□□□□□ -0.6
HIF3A-204ENST00000300862 SLC25A4P12235 298 aa11.33□□□□□ -0.6
HIF3A-204ENST00000300862 PNLIPP16233 465 aa11.33□□□□□ -0.6
HIF3A-204ENST00000300862 MPZP25189 248 aa11.33□□□□□ -0.6
HIF3A-204ENST00000300862 CSNK1A1P48729 337 aa11.33□□□□□ -0.6
HIF3A-204ENST00000300862 SLC35A1P78382 337 aa11.33□□□□□ -0.6
HIF3A-204ENST00000300862 SRSF4Q08170 494 aaKnown RBP11.33□□□□□ -0.6
HIF3A-204ENST00000300862 OR2F1Q13607 317 aa11.33□□□□□ -0.6
HIF3A-204ENST00000300862 KISS1Q15726 138 aa11.33□□□□□ -0.6
HIF3A-204ENST00000300862 ZNF528Q3MIS6 628 aa11.33□□□□□ -0.6
HIF3A-204ENST00000300862 PAN3Q58A45 887 aaKnown RBP11.33□□□□□ -0.6
HIF3A-204ENST00000300862 HAGHLQ6PII5 290 aaPredicted RBP11.33□□□□□ -0.6
HIF3A-204ENST00000300862 ACOT7LQ6ZUV0 252 aa11.33□□□□□ -0.6
HIF3A-204ENST00000300862 PGAP1Q75T13 922 aa11.33□□□□□ -0.6
HIF3A-204ENST00000300862 DOK3Q7L591 496 aa11.33□□□□□ -0.6
HIF3A-204ENST00000300862 OR51T1Q8NGJ9 327 aa11.33□□□□□ -0.6
HIF3A-204ENST00000300862 THAP6Q8TBB0 222 aa11.33□□□□□ -0.6
HIF3A-204ENST00000300862 MR1Q95460 341 aa11.33□□□□□ -0.6
HIF3A-204ENST00000300862 HLA-CQ95604 372 aa11.33□□□□□ -0.6
HIF3A-204ENST00000300862 FBLN5Q9UBX5 448 aa11.33□□□□□ -0.6
HIF3A-204ENST00000300862 ZDBF2Q9HCK1 2354 aa11.33□□□□□ -0.6
HIF3A-204ENST00000300862 TP53I11O14683 189 aa11.33□□□□□ -0.6
HIF3A-204ENST00000300862 DUS4LO95620 317 aaKnown RBP11.33□□□□□ -0.6
HIF3A-204ENST00000300862 S100A6P06703 90 aa11.33□□□□□ -0.6
HIF3A-204ENST00000300862 UMODP07911 640 aa11.33□□□□□ -0.6
HIF3A-204ENST00000300862 SERPINA2P20848 420 aa11.33□□□□□ -0.6
HIF3A-204ENST00000300862 EIF1P41567 113 aaKnown RBP11.33□□□□□ -0.6
HIF3A-204ENST00000300862 RAB13P51153 203 aa11.33□□□□□ -0.6
HIF3A-204ENST00000300862 UBE2V2Q15819 145 aa11.33□□□□□ -0.6
HIF3A-204ENST00000300862 UQCC3Q6UW78 93 aa11.33□□□□□ -0.6
HIF3A-204ENST00000300862 RAB11FIP2Q7L804 512 aa11.33□□□□□ -0.6
HIF3A-204ENST00000300862 IFI44Q8TCB0 444 aa11.33□□□□□ -0.6
HIF3A-204ENST00000300862 SLC25A43Q8WUT9 341 aaPredicted RBP11.33□□□□□ -0.6
HIF3A-204ENST00000300862 PIGTQ969N2 578 aa11.33□□□□□ -0.6
HIF3A-204ENST00000300862 TMEM230Q96A57 120 aa11.33□□□□□ -0.6
HIF3A-204ENST00000300862 PHYHIPLQ96FC7 376 aa11.33□□□□□ -0.6
HIF3A-204ENST00000300862 GAREM1Q9H706 876 aa11.33□□□□□ -0.6
HIF3A-204ENST00000300862 CSAG2Q9Y5P2 127 aa11.33□□□□□ -0.6
HIF3A-204ENST00000300862 TLX3O43711 291 aaPredicted RBP11.32□□□□□ -0.6
HIF3A-204ENST00000300862 PGAM2P15259 253 aa11.32□□□□□ -0.6
HIF3A-204ENST00000300862 AMY2BP19961 511 aa11.32□□□□□ -0.6
HIF3A-204ENST00000300862 GUCA1AP43080 201 aaPredicted RBP11.32□□□□□ -0.6
HIF3A-204ENST00000300862 SCRN3Q0VDG4 424 aa11.32□□□□□ -0.6
HIF3A-204ENST00000300862 ENDOGQ14249 297 aaKnown RBP11.32□□□□□ -0.6
HIF3A-204ENST00000300862 RSPO1Q2MKA7 263 aaPredicted RBP11.32□□□□□ -0.6
HIF3A-204ENST00000300862 CRIP3Q6Q6R5 217 aa11.32□□□□□ -0.6
HIF3A-204ENST00000300862 CCDC36Q8IYA8 594 aa11.32□□□□□ -0.6
HIF3A-204ENST00000300862 SVBPQ8N300 66 aa11.32□□□□□ -0.6
HIF3A-204ENST00000300862 INO80EQ8NBZ0 244 aaPredicted RBP11.32□□□□□ -0.6
HIF3A-204ENST00000300862 CHMP1AQ9HD42 196 aaPredicted RBP11.32□□□□□ -0.6
HIF3A-204ENST00000300862 PATE3B3GLJ2 98 aa11.32□□□□□ -0.6
HIF3A-204ENST00000300862 MFNGO00587 321 aa11.32□□□□□ -0.6
HIF3A-204ENST00000300862 SCGNO76038 276 aa11.32□□□□□ -0.6
HIF3A-204ENST00000300862 ACTL6AO96019 429 aa11.32□□□□□ -0.6
HIF3A-204ENST00000300862 HLA-GP17693 338 aa11.32□□□□□ -0.6
HIF3A-204ENST00000300862 MSR1P21757 451 aa11.32□□□□□ -0.6
HIF3A-204ENST00000300862 PTGFRP43088 359 aa11.32□□□□□ -0.6
HIF3A-204ENST00000300862 CCDC157Q569K6 752 aa11.32□□□□□ -0.6
HIF3A-204ENST00000300862 ZNF468Q5VIY5 522 aaPredicted RBP11.32□□□□□ -0.6
HIF3A-204ENST00000300862 DCUN1D4Q92564 292 aa11.32□□□□□ -0.6
HIF3A-204ENST00000300862 RBM14Q96PK6 669 aaKnown RBP11.32□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms