RNA–Protein interactions for RNA: ENST00000299957.10

CASC4-201, Transcript of cancer susceptibility 4, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene CASC4, Length 3,962 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4-201ENST00000299957 LIPHQ8WWY8 451 aa11.84□□□□□ -0.51
CASC4-201ENST00000299957 ZNF175Q9Y473 711 aa11.84□□□□□ -0.51
CASC4-201ENST00000299957 CDH23Q9H251 3354 aa11.84□□□□□ -0.51
CASC4-201ENST00000299957 CXCL13O43927 109 aa11.84□□□□□ -0.51
CASC4-201ENST00000299957 C1QL1O75973 258 aa11.84□□□□□ -0.51
CASC4-201ENST00000299957 FHL5Q5TD97 284 aa11.84□□□□□ -0.51
CASC4-201ENST00000299957 STPG1Q5TH74 334 aa11.84□□□□□ -0.51
CASC4-201ENST00000299957 TMPPEQ6ZT21 453 aa11.84□□□□□ -0.51
CASC4-201ENST00000299957 FBXL14Q8N1E6 418 aa11.84□□□□□ -0.51
CASC4-201ENST00000299957 SLC43A2Q8N370 569 aa11.84□□□□□ -0.51
CASC4-201ENST00000299957 GJC3Q8NFK1 279 aa11.84□□□□□ -0.51
CASC4-201ENST00000299957 OR13C8Q8NGS7 320 aa11.84□□□□□ -0.51
CASC4-201ENST00000299957 MITD1Q8WV92 249 aa11.84□□□□□ -0.51
CASC4-201ENST00000299957 RTN4IP1Q8WWV3 396 aaPredicted RBP11.84□□□□□ -0.51
CASC4-201ENST00000299957 LRFN5Q96NI6 719 aa11.84□□□□□ -0.51
CASC4-201ENST00000299957 RTN4RQ9BZR6 473 aa11.84□□□□□ -0.51
CASC4-201ENST00000299957 FAM234AQ9H0X4 552 aa11.84□□□□□ -0.51
CASC4-201ENST00000299957 PISDQ9UG56 409 aa11.84□□□□□ -0.51
CASC4-201ENST00000299957 COL4A6Q14031 1691 aa11.83□□□□□ -0.51
CASC4-201ENST00000299957 HMGB3O15347 200 aaKnown RBP11.83□□□□□ -0.52
CASC4-201ENST00000299957 HLA-HP01893 362 aa11.83□□□□□ -0.52
CASC4-201ENST00000299957 EFNB1P98172 346 aa11.83□□□□□ -0.52
CASC4-201ENST00000299957 SLC25A26Q70HW3 274 aa11.83□□□□□ -0.52
CASC4-201ENST00000299957 HAS2Q92819 552 aa11.83□□□□□ -0.52
CASC4-201ENST00000299957 DOCK10Q96BY6 2186 aa11.83□□□□□ -0.52
CASC4-201ENST00000299957 ALG1L2C9J202 215 aa11.83□□□□□ -0.52
CASC4-201ENST00000299957 TNFSF11O14788 317 aa11.83□□□□□ -0.52
CASC4-201ENST00000299957 TNFSF14O43557 240 aa11.83□□□□□ -0.52
CASC4-201ENST00000299957 TK1P04183 234 aa11.83□□□□□ -0.52
CASC4-201ENST00000299957 IGHV4-34P06331 123 aa11.83□□□□□ -0.52
CASC4-201ENST00000299957 CPN1P15169 458 aa11.83□□□□□ -0.52
CASC4-201ENST00000299957 FOSL2P15408 326 aa11.83□□□□□ -0.52
CASC4-201ENST00000299957 APOBEC1P41238 236 aaKnown RBP11.83□□□□□ -0.52
CASC4-201ENST00000299957 IDH3GP51553 393 aaPredicted RBP11.83□□□□□ -0.52
CASC4-201ENST00000299957 FUT7Q11130 342 aa11.83□□□□□ -0.52
CASC4-201ENST00000299957 MICBQ29980 383 aa11.83□□□□□ -0.52
CASC4-201ENST00000299957 LCN15Q6UWW0 184 aa11.83□□□□□ -0.52
CASC4-201ENST00000299957 OR9K2Q8NGE7 335 aa11.83□□□□□ -0.52
CASC4-201ENST00000299957 OR2G3Q8NGZ4 309 aa11.83□□□□□ -0.52
CASC4-201ENST00000299957 SLC25A28Q96A46 364 aa11.83□□□□□ -0.52
CASC4-201ENST00000299957 NOTCH3Q9UM47 2321 aa11.83□□□□□ -0.52
CASC4-201ENST00000299957 FAM166BA8MTA8 275 aa11.83□□□□□ -0.52
CASC4-201ENST00000299957 NME1P15531 152 aaKnown RBP11.83□□□□□ -0.52
CASC4-201ENST00000299957 TMEM268Q5VZI3 342 aa11.83□□□□□ -0.52
CASC4-201ENST00000299957 CLEC18BQ6UXF7 455 aa11.83□□□□□ -0.52
CASC4-201ENST00000299957 FAM24BQ8N5W8 94 aa11.83□□□□□ -0.52
CASC4-201ENST00000299957 VWCEQ96DN2 955 aa11.83□□□□□ -0.52
CASC4-201ENST00000299957 PFDN5Q99471 154 aa11.83□□□□□ -0.52
CASC4-201ENST00000299957 C12orf49Q9H741 205 aa11.83□□□□□ -0.52
CASC4-201ENST00000299957 ZNF705GA8MUZ8 300 aaPredicted RBP11.82□□□□□ -0.52
CASC4-201ENST00000299957 UMAD1C9J7I0 102 aa11.82□□□□□ -0.52
CASC4-201ENST00000299957 LMO7DNF2Z398 122 aa11.82□□□□□ -0.52
CASC4-201ENST00000299957 SSSCA1O60232 199 aa11.82□□□□□ -0.52
CASC4-201ENST00000299957 SFTA3P0C7M3 94 aa11.82□□□□□ -0.52
CASC4-201ENST00000299957 ELLP55199 621 aaPredicted RBP11.82□□□□□ -0.52
CASC4-201ENST00000299957 MLF1P58340 268 aa11.82□□□□□ -0.52
CASC4-201ENST00000299957 OR8B12Q8NGG6 310 aa11.82□□□□□ -0.52
CASC4-201ENST00000299957 GPX8Q8TED1 209 aa11.82□□□□□ -0.52
CASC4-201ENST00000299957 VOPP1Q96AW1 172 aa11.82□□□□□ -0.52
CASC4-201ENST00000299957 GABRG3Q99928 467 aa11.82□□□□□ -0.52
CASC4-201ENST00000299957 SOSTQ9BQB4 213 aa11.82□□□□□ -0.52
CASC4-201ENST00000299957 ZNF286AQ9HBT8 521 aa11.82□□□□□ -0.52
CASC4-201ENST00000299957 FANCMQ8IYD8 2048 aa11.82□□□□□ -0.52
CASC4-201ENST00000299957 CTDSPLO15194 276 aa11.82□□□□□ -0.52
CASC4-201ENST00000299957 CARD18P57730 90 aa11.82□□□□□ -0.52
CASC4-201ENST00000299957 LPCAT3Q6P1A2 487 aa11.82□□□□□ -0.52
CASC4-201ENST00000299957 GUSBP11Q6P575 273 aa11.82□□□□□ -0.52
CASC4-201ENST00000299957 RPS19BP1Q86WX3 136 aaKnown RBP11.82□□□□□ -0.52
CASC4-201ENST00000299957 NMNAT2Q9BZQ4 307 aa11.82□□□□□ -0.52
CASC4-201ENST00000299957 PIPOXQ9P0Z9 390 aa11.82□□□□□ -0.52
CASC4-201ENST00000299957 ZNF407Q9C0G0 2248 aa11.82□□□□□ -0.52
CASC4-201ENST00000299957 ABHD16AO95870 558 aa11.82□□□□□ -0.52
CASC4-201ENST00000299957 MSR1P21757 451 aa11.82□□□□□ -0.52
CASC4-201ENST00000299957 S100PP25815 95 aa11.82□□□□□ -0.52
CASC4-201ENST00000299957 TGIF1Q15583 401 aa11.82□□□□□ -0.52
CASC4-201ENST00000299957 CPEB4Q17RY0 729 aaKnown RBP eCLIP11.82□□□□□ -0.52
CASC4-201ENST00000299957 CMTM1Q8IZ96 169 aa11.82□□□□□ -0.52
CASC4-201ENST00000299957 SLC30A7Q8NEW0 376 aa11.82□□□□□ -0.52
CASC4-201ENST00000299957 TCTEX1D2Q8WW35 142 aa11.82□□□□□ -0.52
CASC4-201ENST00000299957 UCN2Q96RP3 112 aa11.82□□□□□ -0.52
CASC4-201ENST00000299957 CREBBPQ92793 2442 aa11.82□□□□□ -0.52
CASC4-201ENST00000299957 MTCL1Q9Y4B5 1905 aaKnown RBP11.81□□□□□ -0.52
CASC4-201ENST00000299957 IGHV1OR21-1A0A087WYE8 117 aa11.81□□□□□ -0.52
CASC4-201ENST00000299957 SHOXO15266 292 aa11.81□□□□□ -0.52
CASC4-201ENST00000299957 HIST1H1DP16402 221 aaKnown RBP11.81□□□□□ -0.52
CASC4-201ENST00000299957 ZXDAP98168 799 aa11.81□□□□□ -0.52
CASC4-201ENST00000299957 MIDNQ504T8 468 aa11.81□□□□□ -0.52
CASC4-201ENST00000299957 SPATA46Q5T0L3 261 aa11.81□□□□□ -0.52
CASC4-201ENST00000299957 OR8G2PQ6IF36 304 aa11.81□□□□□ -0.52
CASC4-201ENST00000299957 DOK3Q7L591 496 aa11.81□□□□□ -0.52
CASC4-201ENST00000299957 SLC38A9Q8NBW4 561 aa11.81□□□□□ -0.52
CASC4-201ENST00000299957 FRZBQ92765 325 aa11.81□□□□□ -0.52
CASC4-201ENST00000299957 SHDQ96IW2 340 aa11.81□□□□□ -0.52
CASC4-201ENST00000299957 CRISPLD2Q9H0B8 497 aa11.81□□□□□ -0.52
CASC4-201ENST00000299957 DUSP15Q9H1R2 295 aaPredicted RBP11.81□□□□□ -0.52
CASC4-201ENST00000299957 ST3GAL6Q9Y274 331 aa11.81□□□□□ -0.52
CASC4-201ENST00000299957 TIMM8BQ9Y5J9 83 aaPredicted RBP11.81□□□□□ -0.52
CASC4-201ENST00000299957 WIF1Q9Y5W5 379 aa11.81□□□□□ -0.52
CASC4-201ENST00000299957 ABCA4P78363 2273 aa11.81□□□□□ -0.52
CASC4-201ENST00000299957 TRAV39A0A0B4J263 110 aa11.81□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms