RNA–Protein interactions for RNA: ENST00000299847.6

CHRFAM7A-201, Transcript of CHRNA7 (exons 5-10) and FAM7A (exons A-E) fusion, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHRFAM7A, Length 6,220 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRFAM7A-201ENST00000299847 CABLES2Q9BTV7 478 aa12.19□□□□□ -0.46
CHRFAM7A-201ENST00000299847 MAST2Q6P0Q8 1798 aa12.18□□□□□ -0.46
CHRFAM7A-201ENST00000299847 KLK8O60259 260 aa12.18□□□□□ -0.46
CHRFAM7A-201ENST00000299847 ZNF117Q03924 483 aa12.18□□□□□ -0.46
CHRFAM7A-201ENST00000299847 OXA1LQ15070 435 aa12.18□□□□□ -0.46
CHRFAM7A-201ENST00000299847 TIGITQ495A1 244 aa12.18□□□□□ -0.46
CHRFAM7A-201ENST00000299847 TMPRSS11FQ6ZWK6 438 aa12.18□□□□□ -0.46
CHRFAM7A-201ENST00000299847 BTLAQ7Z6A9 289 aa12.18□□□□□ -0.46
CHRFAM7A-201ENST00000299847 GNPNAT1Q96EK6 184 aaPredicted RBP12.18□□□□□ -0.46
CHRFAM7A-201ENST00000299847 FOXB1Q99853 325 aa12.18□□□□□ -0.46
CHRFAM7A-201ENST00000299847 GSX2Q9BZM3 304 aa12.18□□□□□ -0.46
CHRFAM7A-201ENST00000299847 SRRQ9GZT4 340 aa12.18□□□□□ -0.46
CHRFAM7A-201ENST00000299847 DOK5Q9P104 306 aa12.18□□□□□ -0.46
CHRFAM7A-201ENST00000299847 EVPLQ92817 2033 aa12.18□□□□□ -0.46
CHRFAM7A-201ENST00000299847 TMEM272A0A1B0GTI8 110 aa12.18□□□□□ -0.46
CHRFAM7A-201ENST00000299847 MPZL1O95297 269 aa12.18□□□□□ -0.46
CHRFAM7A-201ENST00000299847 PTBP1P26599 531 aaKnown RBP eCLIP12.18□□□□□ -0.46
CHRFAM7A-201ENST00000299847 PNLIPRP2P54317 469 aa12.18□□□□□ -0.46
CHRFAM7A-201ENST00000299847 RAB1AP62820 205 aa12.18□□□□□ -0.46
CHRFAM7A-201ENST00000299847 NKG7Q16617 165 aa12.18□□□□□ -0.46
CHRFAM7A-201ENST00000299847 BTNL3Q6UXE8 466 aa12.18□□□□□ -0.46
CHRFAM7A-201ENST00000299847 MRGPREQ86SM8 312 aa12.18□□□□□ -0.46
CHRFAM7A-201ENST00000299847 COMMD1Q8N668 190 aa12.18□□□□□ -0.46
CHRFAM7A-201ENST00000299847 RFESDQ8TAC1 157 aa12.18□□□□□ -0.46
CHRFAM7A-201ENST00000299847 MSL2Q9HCI7 577 aa12.18□□□□□ -0.46
CHRFAM7A-201ENST00000299847 BTAF1O14981 1849 aa12.18□□□□□ -0.46
CHRFAM7A-201ENST00000299847 ZBTB25P24278 435 aa12.18□□□□□ -0.46
CHRFAM7A-201ENST00000299847 PPP1CAP62136 330 aa12.18□□□□□ -0.46
CHRFAM7A-201ENST00000299847 DHRS13Q6UX07 377 aa12.18□□□□□ -0.46
CHRFAM7A-201ENST00000299847 SIRT5Q9NXA8 310 aa12.18□□□□□ -0.46
CHRFAM7A-201ENST00000299847 LAMP3Q9UQV4 416 aa12.18□□□□□ -0.46
CHRFAM7A-201ENST00000299847 ECM29Q5VYK3 1845 aa12.18□□□□□ -0.46
CHRFAM7A-201ENST00000299847 FIGNL2A6NMB9 653 aa12.18□□□□□ -0.46
CHRFAM7A-201ENST00000299847 TRIM77I1YAP6 450 aa12.18□□□□□ -0.46
CHRFAM7A-201ENST00000299847 RER1O15258 196 aa12.18□□□□□ -0.46
CHRFAM7A-201ENST00000299847 EXTL1Q92935 676 aa12.18□□□□□ -0.46
CHRFAM7A-201ENST00000299847 SERTM1A2A2V5 107 aa12.18□□□□□ -0.46
CHRFAM7A-201ENST00000299847 DSCR4P56555 118 aaPredicted RBP12.18□□□□□ -0.46
CHRFAM7A-201ENST00000299847 SLC38A6Q8IZM9 456 aa12.18□□□□□ -0.46
CHRFAM7A-201ENST00000299847 C17orf78Q8N4C9 275 aa12.18□□□□□ -0.46
CHRFAM7A-201ENST00000299847 FABP4P15090 132 aa12.17□□□□□ -0.46
CHRFAM7A-201ENST00000299847 SUMO1P63165 101 aaKnown RBP12.17□□□□□ -0.46
CHRFAM7A-201ENST00000299847 GAMTQ14353 236 aa12.17□□□□□ -0.46
CHRFAM7A-201ENST00000299847 FAHD1Q6P587 224 aa12.17□□□□□ -0.46
CHRFAM7A-201ENST00000299847 GAR1Q9NY12 217 aaKnown RBP12.17□□□□□ -0.46
CHRFAM7A-201ENST00000299847 ASPDHA6ND91 283 aa12.17□□□□□ -0.46
CHRFAM7A-201ENST00000299847 COX5AP20674 150 aa12.17□□□□□ -0.46
CHRFAM7A-201ENST00000299847 OR3A4PP47883 348 aa12.17□□□□□ -0.46
CHRFAM7A-201ENST00000299847 AANATQ16613 207 aa12.17□□□□□ -0.46
CHRFAM7A-201ENST00000299847 TGIF2LXQ8IUE1 241 aa12.17□□□□□ -0.46
CHRFAM7A-201ENST00000299847 ARHGAP5-AS1Q96IT6 56 aa12.17□□□□□ -0.46
CHRFAM7A-201ENST00000299847 FAAP24Q9BTP7 215 aa12.17□□□□□ -0.46
CHRFAM7A-201ENST00000299847 ALG1L2C9J202 215 aa12.17□□□□□ -0.46
CHRFAM7A-201ENST00000299847 CBR3O75828 277 aa12.17□□□□□ -0.46
CHRFAM7A-201ENST00000299847 SFTA3P0C7M3 94 aa12.17□□□□□ -0.46
CHRFAM7A-201ENST00000299847 C3AR1Q16581 482 aa12.17□□□□□ -0.46
CHRFAM7A-201ENST00000299847 ZNF766Q5HY98 468 aa12.17□□□□□ -0.46
CHRFAM7A-201ENST00000299847 FBXO34Q9NWN3 711 aa12.17□□□□□ -0.46
CHRFAM7A-201ENST00000299847 NPTNQ9Y639 398 aa12.17□□□□□ -0.46
CHRFAM7A-201ENST00000299847 RNF224P0DH78 156 aa12.17□□□□□ -0.46
CHRFAM7A-201ENST00000299847 FKBP2P26885 142 aaKnown RBP12.17□□□□□ -0.46
CHRFAM7A-201ENST00000299847 G0S2P27469 103 aa12.17□□□□□ -0.46
CHRFAM7A-201ENST00000299847 MEOX1P50221 254 aa12.17□□□□□ -0.46
CHRFAM7A-201ENST00000299847 DHRS7BQ6IAN0 325 aaPredicted RBP12.17□□□□□ -0.46
CHRFAM7A-201ENST00000299847 FBXL14Q8N1E6 418 aa12.17□□□□□ -0.46
CHRFAM7A-201ENST00000299847 OR1F12Q8NHA8 337 aa12.17□□□□□ -0.46
CHRFAM7A-201ENST00000299847 BTF3L4Q96K17 158 aa12.17□□□□□ -0.46
CHRFAM7A-201ENST00000299847 TRGV10A0A0A0MS01 117 aa12.17□□□□□ -0.46
CHRFAM7A-201ENST00000299847 IGHV5-51A0A0C4DH38 117 aa12.17□□□□□ -0.46
CHRFAM7A-201ENST00000299847 ADAM20O43506 726 aa12.17□□□□□ -0.46
CHRFAM7A-201ENST00000299847 FCGR3BO75015 233 aa12.17□□□□□ -0.46
CHRFAM7A-201ENST00000299847 LYZL6O75951 148 aa12.17□□□□□ -0.46
CHRFAM7A-201ENST00000299847 ALX3O95076 343 aa12.17□□□□□ -0.46
CHRFAM7A-201ENST00000299847 CD37P11049 281 aa12.17□□□□□ -0.46
CHRFAM7A-201ENST00000299847 COX7A1P24310 79 aa12.17□□□□□ -0.46
CHRFAM7A-201ENST00000299847 HTRA4P83105 476 aaPredicted RBP12.17□□□□□ -0.46
CHRFAM7A-201ENST00000299847 GSG1Q2KHT4 349 aa12.17□□□□□ -0.46
CHRFAM7A-201ENST00000299847 ZNF774Q6NX45 483 aa12.17□□□□□ -0.46
CHRFAM7A-201ENST00000299847 ZNF793Q6ZN11 406 aa12.17□□□□□ -0.46
CHRFAM7A-201ENST00000299847 DEFB124Q8NES8 71 aa12.17□□□□□ -0.46
CHRFAM7A-201ENST00000299847 OR2T6Q8NHC8 308 aa12.17□□□□□ -0.46
CHRFAM7A-201ENST00000299847 SPACA9Q96E40 222 aaPredicted RBP12.17□□□□□ -0.46
CHRFAM7A-201ENST00000299847 ZDHHC11Q9H8X9 412 aa12.17□□□□□ -0.46
CHRFAM7A-201ENST00000299847 ICAM5Q9UMF0 924 aa12.17□□□□□ -0.46
CHRFAM7A-201ENST00000299847 TRGV5A0A0B4J1U4 118 aa12.16□□□□□ -0.46
CHRFAM7A-201ENST00000299847 LOC102723971A0A1B0GUV8 181 aa12.16□□□□□ -0.46
CHRFAM7A-201ENST00000299847 DND1Q8IYX4 353 aaKnown RBP12.16□□□□□ -0.46
CHRFAM7A-201ENST00000299847 OR1L3Q8NH93 324 aa12.16□□□□□ -0.46
CHRFAM7A-201ENST00000299847 NT5CQ8TCD5 201 aa12.16□□□□□ -0.46
CHRFAM7A-201ENST00000299847 ZNF71Q9NQZ8 489 aaPredicted RBP12.16□□□□□ -0.46
CHRFAM7A-201ENST00000299847 ZNF205O95201 554 aa12.16□□□□□ -0.46
CHRFAM7A-201ENST00000299847 NTN1O95631 604 aa12.16□□□□□ -0.46
CHRFAM7A-201ENST00000299847 OPRK1P41145 380 aa12.16□□□□□ -0.46
CHRFAM7A-201ENST00000299847 FUT6P51993 359 aa12.16□□□□□ -0.46
CHRFAM7A-201ENST00000299847 SLC37A1P57057 533 aa12.16□□□□□ -0.46
CHRFAM7A-201ENST00000299847 SMIM21Q3B7S5 101 aa12.16□□□□□ -0.46
CHRFAM7A-201ENST00000299847 CCL17Q92583 94 aa12.16□□□□□ -0.46
CHRFAM7A-201ENST00000299847 MED30Q96HR3 178 aa12.16□□□□□ -0.46
CHRFAM7A-201ENST00000299847 DCAF16Q9NXF7 216 aa12.16□□□□□ -0.46
CHRFAM7A-201ENST00000299847 METTL12A8MUP2 240 aa12.16□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms