RNA–Protein interactions for RNA: ENST00000297267.13

FNDC1-201, Transcript of fibronectin type III domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene FNDC1, Length 6,552 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FNDC1-201ENST00000297267 ZNF331Q9NQX6 463 aaPredicted RBP13.85□□□□□ -0.19
FNDC1-201ENST00000297267 GEMIN2O14893 280 aaKnown RBP13.85□□□□□ -0.19
FNDC1-201ENST00000297267 CPN1P15169 458 aa13.85□□□□□ -0.19
FNDC1-201ENST00000297267 HTRA4P83105 476 aaPredicted RBP13.85□□□□□ -0.19
FNDC1-201ENST00000297267 FABP9Q0Z7S8 132 aa13.85□□□□□ -0.19
FNDC1-201ENST00000297267 LPCAT3Q6P1A2 487 aa13.85□□□□□ -0.19
FNDC1-201ENST00000297267 RYDENQ9NUL5 291 aaKnown RBP13.85□□□□□ -0.19
FNDC1-201ENST00000297267 GALNSP34059 522 aa13.84□□□□□ -0.19
FNDC1-201ENST00000297267 PCBP4P57723 403 aaKnown RBP13.84□□□□□ -0.19
FNDC1-201ENST00000297267 HYAL1Q12794 435 aa13.84□□□□□ -0.19
FNDC1-201ENST00000297267 THSD4Q6ZMP0 1018 aa13.84□□□□□ -0.19
FNDC1-201ENST00000297267 MOGAT1Q96PD6 335 aa13.84□□□□□ -0.19
FNDC1-201ENST00000297267 SLC22A20A6NK97 555 aa13.84□□□□□ -0.19
FNDC1-201ENST00000297267 ST8SIA3O43173 380 aa13.84□□□□□ -0.19
FNDC1-201ENST00000297267 EML2O95834 649 aa13.84□□□□□ -0.19
FNDC1-201ENST00000297267 CDKN2AP42771 156 aaKnown RBP13.84□□□□□ -0.19
FNDC1-201ENST00000297267 DPTQ07507 201 aa13.84□□□□□ -0.19
FNDC1-201ENST00000297267 C1QL3Q5VWW1 255 aa13.84□□□□□ -0.19
FNDC1-201ENST00000297267 MSRB3Q8IXL7 192 aa13.84□□□□□ -0.19
FNDC1-201ENST00000297267 DUS3LQ96G46 650 aaKnown RBP13.84□□□□□ -0.19
FNDC1-201ENST00000297267 A0A087WUJ7 227 aa13.84□□□□□ -0.19
FNDC1-201ENST00000297267 H0YIG0 161 aa13.84□□□□□ -0.19
FNDC1-201ENST00000297267 CDC42EP2O14613 210 aa13.84□□□□□ -0.19
FNDC1-201ENST00000297267 GLAP06280 429 aa13.84□□□□□ -0.19
FNDC1-201ENST00000297267 THBS3P49746 956 aa13.84□□□□□ -0.19
FNDC1-201ENST00000297267 ERVS71-1P61550 626 aa13.84□□□□□ -0.19
FNDC1-201ENST00000297267 EGR3Q06889 387 aa13.84□□□□□ -0.19
FNDC1-201ENST00000297267 FZD5Q13467 585 aa13.84□□□□□ -0.19
FNDC1-201ENST00000297267 TEX261Q6UWH6 196 aa13.84□□□□□ -0.19
FNDC1-201ENST00000297267 TMPRSS11FQ6ZWK6 438 aa13.84□□□□□ -0.19
FNDC1-201ENST00000297267 TXNIPQ9H3M7 391 aa13.84□□□□□ -0.19
FNDC1-201ENST00000297267 POMT1Q9Y6A1 747 aa13.84□□□□□ -0.19
FNDC1-201ENST00000297267 U3KQ87 197 aa13.84□□□□□ -0.19
FNDC1-201ENST00000297267 TRAV20A0A0B4J274 112 aa13.84□□□□□ -0.19
FNDC1-201ENST00000297267 CBY3A6NI87 242 aa13.84□□□□□ -0.19
FNDC1-201ENST00000297267 EIF4E2O60573 245 aaKnown RBP13.84□□□□□ -0.19
FNDC1-201ENST00000297267 ZDHHC11BP0C7U3 371 aa13.84□□□□□ -0.19
FNDC1-201ENST00000297267 DAOP14920 347 aa13.84□□□□□ -0.19
FNDC1-201ENST00000297267 STUMQ69YW2 141 aa13.84□□□□□ -0.19
FNDC1-201ENST00000297267 CSF2RBP32927 897 aa13.83□□□□□ -0.19
FNDC1-201ENST00000297267 HLXQ14774 488 aaPredicted RBP13.83□□□□□ -0.19
FNDC1-201ENST00000297267 HMGCLL1Q8TB92 370 aa13.83□□□□□ -0.19
FNDC1-201ENST00000297267 LURAP1Q96LR2 239 aa13.83□□□□□ -0.19
FNDC1-201ENST00000297267 ARFGEF1Q9Y6D6 1849 aa13.83□□□□□ -0.19
FNDC1-201ENST00000297267 STRCQ7RTU9 1775 aa13.83□□□□□ -0.19
FNDC1-201ENST00000297267 GLI3P10071 1580 aa13.83□□□□□ -0.19
FNDC1-201ENST00000297267 IGHV3OR15-7A0A075B7D8 119 aa13.83□□□□□ -0.2
FNDC1-201ENST00000297267 ITGBL1O95965 494 aaPredicted RBP13.83□□□□□ -0.2
FNDC1-201ENST00000297267 ZNF17P17021 662 aa13.83□□□□□ -0.2
FNDC1-201ENST00000297267 LHX8Q68G74 356 aa13.83□□□□□ -0.2
FNDC1-201ENST00000297267 CBLN3Q6UW01 205 aa13.83□□□□□ -0.2
FNDC1-201ENST00000297267 KLHDC8BQ8IXV7 354 aa13.83□□□□□ -0.2
FNDC1-201ENST00000297267 AURKAIP1Q9NWT8 199 aaPredicted RBP13.83□□□□□ -0.2
FNDC1-201ENST00000297267 TMEM200CA6NKL6 621 aa13.83□□□□□ -0.2
FNDC1-201ENST00000297267 FAM157AC9JC47 383 aa13.83□□□□□ -0.2
FNDC1-201ENST00000297267 MMP7P09237 267 aaPredicted RBP13.83□□□□□ -0.2
FNDC1-201ENST00000297267 SLC35E1Q96K37 410 aa13.83□□□□□ -0.2
FNDC1-201ENST00000297267 TEX101Q9BY14 249 aa13.83□□□□□ -0.2
FNDC1-201ENST00000297267 GPR87Q9BY21 358 aa13.83□□□□□ -0.2
FNDC1-201ENST00000297267 G3V3Q6 166 aa13.83□□□□□ -0.2
FNDC1-201ENST00000297267 IGF2P01344 180 aa13.83□□□□□ -0.2
FNDC1-201ENST00000297267 MUC20Q8N307 709 aaPredicted RBP13.83□□□□□ -0.2
FNDC1-201ENST00000297267 TP53I13Q8NBR0 393 aaPredicted RBP13.83□□□□□ -0.2
FNDC1-201ENST00000297267 PRDM7Q9NQW5 492 aa13.83□□□□□ -0.2
FNDC1-201ENST00000297267 ADAMTSL3P82987 1691 aa13.83□□□□□ -0.2
FNDC1-201ENST00000297267 CLEC18AA5D8T8 446 aa13.83□□□□□ -0.2
FNDC1-201ENST00000297267 FRG2CA6NGY1 282 aa13.83□□□□□ -0.2
FNDC1-201ENST00000297267 OR1C1Q15619 314 aa13.83□□□□□ -0.2
FNDC1-201ENST00000297267 CLEC18CQ8NCF0 446 aa13.83□□□□□ -0.2
FNDC1-201ENST00000297267 OR10P1Q8NGE3 313 aa13.83□□□□□ -0.2
FNDC1-201ENST00000297267 ADAT1Q9BUB4 502 aaKnown RBP13.83□□□□□ -0.2
FNDC1-201ENST00000297267 PPP5D1E7EU14 171 aa13.82□□□□□ -0.2
FNDC1-201ENST00000297267 BTNL8Q6UX41 500 aa13.82□□□□□ -0.2
FNDC1-201ENST00000297267 ADGRG7Q96K78 797 aa13.82□□□□□ -0.2
FNDC1-201ENST00000297267 FAM60AQ9NP50 221 aa13.82□□□□□ -0.2
FNDC1-201ENST00000297267 LAMP3Q9UQV4 416 aa13.82□□□□□ -0.2
FNDC1-201ENST00000297267 A0A1W2PPC4 97 aa13.82□□□□□ -0.2
FNDC1-201ENST00000297267 COX7A2P2O60397 106 aa13.82□□□□□ -0.2
FNDC1-201ENST00000297267 EIF3GO75821 320 aaKnown RBP eCLIP13.82□□□□□ -0.2
FNDC1-201ENST00000297267 GYPAP02724 150 aa13.82□□□□□ -0.2
FNDC1-201ENST00000297267 HTN1P15515 57 aa13.82□□□□□ -0.2
FNDC1-201ENST00000297267 PRPH2P23942 346 aa13.82□□□□□ -0.2
FNDC1-201ENST00000297267 ERVFC1-1P60608 527 aa13.82□□□□□ -0.2
FNDC1-201ENST00000297267 SHBQ15464 509 aa13.82□□□□□ -0.2
FNDC1-201ENST00000297267 RAB39BQ96DA2 213 aa13.82□□□□□ -0.2
FNDC1-201ENST00000297267 SMIM7Q9BQ49 75 aa13.82□□□□□ -0.2
FNDC1-201ENST00000297267 RHOFQ9HBH0 211 aa13.82□□□□□ -0.2
FNDC1-201ENST00000297267 DEFB124Q8NES8 71 aa13.82□□□□□ -0.2
FNDC1-201ENST00000297267 LHX4Q969G2 390 aa13.82□□□□□ -0.2
FNDC1-201ENST00000297267 SLC25A21Q9BQT8 299 aaPredicted RBP13.82□□□□□ -0.2
FNDC1-201ENST00000297267 MS4A7Q9GZW8 240 aaPredicted RBP13.82□□□□□ -0.2
FNDC1-201ENST00000297267 OR51I2Q9H344 312 aa13.82□□□□□ -0.2
FNDC1-201ENST00000297267 CNTD2Q9H8S5 307 aa13.82□□□□□ -0.2
FNDC1-201ENST00000297267 KIAA1456Q9P272 454 aa13.82□□□□□ -0.2
FNDC1-201ENST00000297267 NPTNQ9Y639 398 aa13.82□□□□□ -0.2
FNDC1-201ENST00000297267 PPICP45877 212 aa13.82□□□□□ -0.2
FNDC1-201ENST00000297267 EAF1Q96JC9 268 aaPredicted RBP13.82□□□□□ -0.2
FNDC1-201ENST00000297267 RRP8O43159 456 aaKnown RBP13.82□□□□□ -0.2
FNDC1-201ENST00000297267 FCGR3BO75015 233 aa13.82□□□□□ -0.2
FNDC1-201ENST00000297267 PDGFBP01127 241 aaPredicted RBP13.82□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms