RNA–Protein interactions for RNA: ENST00000295522.3

CLDN1-201, Transcript of claudin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLDN1, Length 3,481 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN1-201ENST00000295522 POC1AQ8NBT0 407 aa9.06□□□□□ -0.96
CLDN1-201ENST00000295522 M1APQ8TC57 530 aa9.06□□□□□ -0.96
CLDN1-201ENST00000295522 ABHD5Q8WTS1 349 aa9.06□□□□□ -0.96
CLDN1-201ENST00000295522 THRSPQ92748 146 aa9.06□□□□□ -0.96
CLDN1-201ENST00000295522 TVP23CQ96ET8 276 aa9.06□□□□□ -0.96
CLDN1-201ENST00000295522 CCDC3Q9BQI4 270 aa9.06□□□□□ -0.96
CLDN1-201ENST00000295522 ABHD6Q9BV23 337 aa9.06□□□□□ -0.96
CLDN1-201ENST00000295522 RIMS4Q9H426 269 aaPredicted RBP9.06□□□□□ -0.96
CLDN1-201ENST00000295522 C1orf123Q9NWV4 160 aa9.06□□□□□ -0.96
CLDN1-201ENST00000295522 XKRY2A2RUG3 117 aa9.06□□□□□ -0.96
CLDN1-201ENST00000295522 MARCH11A6NNE9 402 aa9.06□□□□□ -0.96
CLDN1-201ENST00000295522 C9J4A7 227 aa9.06□□□□□ -0.96
CLDN1-201ENST00000295522 VSIG8P0DPA2 414 aa9.06□□□□□ -0.96
CLDN1-201ENST00000295522 GZMBP10144 247 aa9.06□□□□□ -0.96
CLDN1-201ENST00000295522 DBX2Q6ZNG2 339 aa9.06□□□□□ -0.96
CLDN1-201ENST00000295522 TMEM156Q8N614 296 aa9.06□□□□□ -0.96
CLDN1-201ENST00000295522 AQP3Q92482 292 aa9.06□□□□□ -0.96
CLDN1-201ENST00000295522 RERGQ96A58 199 aaPredicted RBP9.06□□□□□ -0.96
CLDN1-201ENST00000295522 GNG13Q9P2W3 67 aa9.06□□□□□ -0.96
CLDN1-201ENST00000295522 PADI1Q9ULC6 663 aa9.06□□□□□ -0.96
CLDN1-201ENST00000295522 GPR132Q9UNW8 380 aa9.06□□□□□ -0.96
CLDN1-201ENST00000295522 CHD3Q12873 2000 aaKnown RBP9.05□□□□□ -0.96
CLDN1-201ENST00000295522 IGKV1D-16P01601 117 aa9.05□□□□□ -0.96
CLDN1-201ENST00000295522 H2BFMP0C1H6 154 aa9.05□□□□□ -0.96
CLDN1-201ENST00000295522 DANCRP0C864 163 aa9.05□□□□□ -0.96
CLDN1-201ENST00000295522 OR5H8P0DN80 308 aa9.05□□□□□ -0.96
CLDN1-201ENST00000295522 SUPT4H1P63272 117 aaKnown RBP9.05□□□□□ -0.96
CLDN1-201ENST00000295522 SP3Q02447 781 aa9.05□□□□□ -0.96
CLDN1-201ENST00000295522 COTL1Q14019 142 aa9.05□□□□□ -0.96
CLDN1-201ENST00000295522 RNF151Q2KHN1 245 aa9.05□□□□□ -0.96
CLDN1-201ENST00000295522 DEFB110Q30KQ9 67 aa9.05□□□□□ -0.96
CLDN1-201ENST00000295522 PHLDA2Q53GA4 152 aa9.05□□□□□ -0.96
CLDN1-201ENST00000295522 C1QL3Q5VWW1 255 aa9.05□□□□□ -0.96
CLDN1-201ENST00000295522 VN1R4Q7Z5H5 301 aa9.05□□□□□ -0.96
CLDN1-201ENST00000295522 ARHGAP5-AS1Q96IT6 56 aa9.05□□□□□ -0.96
CLDN1-201ENST00000295522 OR52A1Q9UKL2 312 aa9.05□□□□□ -0.96
CLDN1-201ENST00000295522 B3GALT5Q9Y2C3 310 aa9.05□□□□□ -0.96
CLDN1-201ENST00000295522 COL4A3Q01955 1670 aa9.05□□□□□ -0.96
CLDN1-201ENST00000295522 GNRH1P01148 92 aa9.05□□□□□ -0.96
CLDN1-201ENST00000295522 SOD2P04179 222 aa9.05□□□□□ -0.96
CLDN1-201ENST00000295522 MYOGP15173 224 aa9.05□□□□□ -0.96
CLDN1-201ENST00000295522 FUT3P21217 361 aa9.05□□□□□ -0.96
CLDN1-201ENST00000295522 ZNF10P21506 573 aaPredicted RBP9.05□□□□□ -0.96
CLDN1-201ENST00000295522 ZNF93P35789 620 aaPredicted RBP9.05□□□□□ -0.96
CLDN1-201ENST00000295522 ADPRHP54922 357 aa9.05□□□□□ -0.96
CLDN1-201ENST00000295522 RND3P61587 244 aa9.05□□□□□ -0.96
CLDN1-201ENST00000295522 FAM3AP98173 230 aa9.05□□□□□ -0.96
CLDN1-201ENST00000295522 MESP2Q0VG99 397 aa9.05□□□□□ -0.96
CLDN1-201ENST00000295522 UNC119Q13432 240 aa9.05□□□□□ -0.96
CLDN1-201ENST00000295522 CBLN3Q6UW01 205 aa9.05□□□□□ -0.96
CLDN1-201ENST00000295522 FBXW12Q6X9E4 464 aa9.05□□□□□ -0.96
CLDN1-201ENST00000295522 ZNF66Q6ZN08 573 aa9.05□□□□□ -0.96
CLDN1-201ENST00000295522 PRR22Q8IZ63 422 aa9.05□□□□□ -0.96
CLDN1-201ENST00000295522 LRRC18Q8N456 261 aa9.05□□□□□ -0.96
CLDN1-201ENST00000295522 RAB24Q969Q5 203 aa9.05□□□□□ -0.96
CLDN1-201ENST00000295522 FAM71F1Q96KD3 344 aaPredicted RBP9.05□□□□□ -0.96
CLDN1-201ENST00000295522 Q9N2J8 555 aa9.05□□□□□ -0.96
CLDN1-201ENST00000295522 LAMP3Q9UQV4 416 aa9.05□□□□□ -0.96
CLDN1-201ENST00000295522 CCDC187A0A096LP49 1063 aa9.04□□□□□ -0.96
CLDN1-201ENST00000295522 WIPF3A6NGB9 483 aa9.04□□□□□ -0.96
CLDN1-201ENST00000295522 OR4A8P0C604 315 aa9.04□□□□□ -0.96
CLDN1-201ENST00000295522 FCARP24071 287 aa9.04□□□□□ -0.96
CLDN1-201ENST00000295522 SLC37A1P57057 533 aa9.04□□□□□ -0.96
CLDN1-201ENST00000295522 ZNF658BQ4V348 819 aaPredicted RBP9.04□□□□□ -0.96
CLDN1-201ENST00000295522 TCEAL5Q5H9L2 206 aa9.04□□□□□ -0.96
CLDN1-201ENST00000295522 VITQ6UXI7 678 aa9.04□□□□□ -0.96
CLDN1-201ENST00000295522 DGAT2L6Q6ZPD8 337 aa9.04□□□□□ -0.96
CLDN1-201ENST00000295522 DCXRQ7Z4W1 244 aa9.04□□□□□ -0.96
CLDN1-201ENST00000295522 ARL6IP6Q8N6S5 226 aa9.04□□□□□ -0.96
CLDN1-201ENST00000295522 MFSD9Q8NBP5 474 aa9.04□□□□□ -0.96
CLDN1-201ENST00000295522 OR51T1Q8NGJ9 327 aa9.04□□□□□ -0.96
CLDN1-201ENST00000295522 RPS4Y2Q8TD47 263 aa9.04□□□□□ -0.96
CLDN1-201ENST00000295522 SCARF2Q96GP6 870 aaPredicted RBP9.04□□□□□ -0.96
CLDN1-201ENST00000295522 LINC00615Q96LM1 132 aaPredicted RBP9.04□□□□□ -0.96
CLDN1-201ENST00000295522 TMEM208Q9BTX3 173 aa9.04□□□□□ -0.96
CLDN1-201ENST00000295522 MBNL1Q9NR56 388 aaKnown RBP9.04□□□□□ -0.96
CLDN1-201ENST00000295522 COA3Q9Y2R0 106 aaPredicted RBP9.04□□□□□ -0.96
CLDN1-201ENST00000295522 SCN10AQ9Y5Y9 1956 aa9.04□□□□□ -0.96
CLDN1-201ENST00000295522 KIAA0100Q14667 2235 aaKnown RBP9.04□□□□□ -0.96
CLDN1-201ENST00000295522 FTCDNL1E5RQL4 147 aa9.04□□□□□ -0.96
CLDN1-201ENST00000295522 IFNL4K9M1U5 179 aa9.04□□□□□ -0.96
CLDN1-201ENST00000295522 GPR75O95800 540 aa9.04□□□□□ -0.96
CLDN1-201ENST00000295522 MMP16P51512 607 aa9.04□□□□□ -0.96
CLDN1-201ENST00000295522 MLF1P58340 268 aa9.04□□□□□ -0.96
CLDN1-201ENST00000295522 PAX5Q02548 391 aa9.04□□□□□ -0.96
CLDN1-201ENST00000295522 OR5I1Q13606 314 aa9.04□□□□□ -0.96
CLDN1-201ENST00000295522 ZNF74Q16587 644 aa9.04□□□□□ -0.96
CLDN1-201ENST00000295522 KLHL24Q6TFL4 600 aa9.04□□□□□ -0.96
CLDN1-201ENST00000295522 BTNL3Q6UXE8 466 aa9.04□□□□□ -0.96
CLDN1-201ENST00000295522 RNF144BQ7Z419 303 aa9.04□□□□□ -0.96
CLDN1-201ENST00000295522 GPR137CQ8N3F9 429 aa9.04□□□□□ -0.96
CLDN1-201ENST00000295522 ZNF784Q8NCA9 323 aaPredicted RBP9.04□□□□□ -0.96
CLDN1-201ENST00000295522 NOL4LQ96MY1 436 aaPredicted RBP9.04□□□□□ -0.96
CLDN1-201ENST00000295522 STACQ99469 402 aa9.04□□□□□ -0.96
CLDN1-201ENST00000295522 TMEM59Q9BXS4 323 aa9.04□□□□□ -0.96
CLDN1-201ENST00000295522 HCFC2Q9Y5Z7 792 aa9.04□□□□□ -0.96
CLDN1-201ENST00000295522 RAB4AP20338 218 aa9.04□□□□□ -0.96
CLDN1-201ENST00000295522 CST5P28325 142 aaPredicted RBP9.04□□□□□ -0.96
CLDN1-201ENST00000295522 PPM1AP35813 382 aa9.04□□□□□ -0.96
CLDN1-201ENST00000295522 ERVS71-1P61550 626 aa9.04□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 55.6 ms