RNA–Protein interactions for RNA: ENST00000293778.10

CXCL16-201, Transcript of C-X-C motif chemokine ligand 16, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CXCL16, Length 2,222 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL16-201ENST00000293778 MICBQ29980 383 aa17.49■□□□□ 0.39
CXCL16-201ENST00000293778 NHLRC3Q5JS37 347 aa17.49■□□□□ 0.39
CXCL16-201ENST00000293778 ALKBH3Q96Q83 286 aaPredicted RBP17.49■□□□□ 0.39
CXCL16-201ENST00000293778 PCDHGA1Q9Y5H4 931 aa17.49■□□□□ 0.39
CXCL16-201ENST00000293778 C9orf170A2RU37 121 aa17.48■□□□□ 0.39
CXCL16-201ENST00000293778 SYNGR3O43761 229 aa17.48■□□□□ 0.39
CXCL16-201ENST00000293778 MGMTP16455 207 aa17.48■□□□□ 0.39
CXCL16-201ENST00000293778 CLDN15P56746 228 aa17.48■□□□□ 0.39
CXCL16-201ENST00000293778 SCRN3Q0VDG4 424 aa17.48■□□□□ 0.39
CXCL16-201ENST00000293778 ARFRP1Q13795 201 aa17.48■□□□□ 0.39
CXCL16-201ENST00000293778 ZNF774Q6NX45 483 aa17.48■□□□□ 0.39
CXCL16-201ENST00000293778 FAHD2BQ6P2I3 314 aaPredicted RBP17.48■□□□□ 0.39
CXCL16-201ENST00000293778 COMMD7Q86VX2 200 aa17.48■□□□□ 0.39
CXCL16-201ENST00000293778 HAS2Q92819 552 aa17.48■□□□□ 0.39
CXCL16-201ENST00000293778 PIGTQ969N2 578 aa17.48■□□□□ 0.39
CXCL16-201ENST00000293778 FAHD2AQ96GK7 314 aa17.48■□□□□ 0.39
CXCL16-201ENST00000293778 S100A13Q99584 98 aa17.48■□□□□ 0.39
CXCL16-201ENST00000293778 FOXJ2Q9P0K8 574 aa17.48■□□□□ 0.39
CXCL16-201ENST00000293778 ZNF230Q9UIE0 474 aaPredicted RBP17.48■□□□□ 0.39
CXCL16-201ENST00000293778 TRAV14DV4A0A0A6YYC5 116 aa17.48■□□□□ 0.39
CXCL16-201ENST00000293778 TUBAL3A6NHL2 446 aa17.48■□□□□ 0.39
CXCL16-201ENST00000293778 CD8AP01732 235 aa17.48■□□□□ 0.39
CXCL16-201ENST00000293778 B4GALT1P15291 398 aa17.48■□□□□ 0.39
CXCL16-201ENST00000293778 RPA2P15927 270 aa17.48■□□□□ 0.39
CXCL16-201ENST00000293778 IL13RA1P78552 427 aa17.48■□□□□ 0.39
CXCL16-201ENST00000293778 ACTBL2Q562R1 376 aa17.48■□□□□ 0.39
CXCL16-201ENST00000293778 HOGA1Q86XE5 327 aa17.48■□□□□ 0.39
CXCL16-201ENST00000293778 OR10K1Q8NGX5 313 aa17.48■□□□□ 0.39
CXCL16-201ENST00000293778 OR1F12Q8NHA8 337 aa17.48■□□□□ 0.39
CXCL16-201ENST00000293778 CYYR1Q96J86 154 aa17.48■□□□□ 0.39
CXCL16-201ENST00000293778 OCSTAMPQ9BR26 566 aa17.48■□□□□ 0.39
CXCL16-201ENST00000293778 MFFQ9GZY8 342 aa17.48■□□□□ 0.39
CXCL16-201ENST00000293778 LRFN1Q9P244 771 aa17.48■□□□□ 0.39
CXCL16-201ENST00000293778 M0R296 226 aa17.47■□□□□ 0.39
CXCL16-201ENST00000293778 SERPINA2P20848 420 aa17.47■□□□□ 0.39
CXCL16-201ENST00000293778 CBX5P45973 191 aa17.47■□□□□ 0.39
CXCL16-201ENST00000293778 SRSF4Q08170 494 aaKnown RBP17.47■□□□□ 0.39
CXCL16-201ENST00000293778 FOXO1Q12778 655 aa17.47■□□□□ 0.39
CXCL16-201ENST00000293778 VAX1Q5SQQ9 334 aa17.47■□□□□ 0.39
CXCL16-201ENST00000293778 SPINK14Q6IE38 97 aa17.47■□□□□ 0.39
CXCL16-201ENST00000293778 ADAD2Q8NCV1 583 aaKnown RBP17.47■□□□□ 0.39
CXCL16-201ENST00000293778 ANGPTL6Q8NI99 470 aa17.47■□□□□ 0.39
CXCL16-201ENST00000293778 MARCH1Q8TCQ1 289 aa17.47■□□□□ 0.39
CXCL16-201ENST00000293778 MITD1Q8WV92 249 aa17.47■□□□□ 0.39
CXCL16-201ENST00000293778 PHB2Q99623 299 aa17.47■□□□□ 0.39
CXCL16-201ENST00000293778 PDCD10Q9BUL8 212 aa17.47■□□□□ 0.39
CXCL16-201ENST00000293778 FN3KRPQ9HA64 309 aa17.47■□□□□ 0.39
CXCL16-201ENST00000293778 BOKQ9UMX3 212 aaPredicted RBP17.47■□□□□ 0.39
CXCL16-201ENST00000293778 CCSO14618 274 aa17.47■□□□□ 0.39
CXCL16-201ENST00000293778 ZNF32P17041 273 aa17.47■□□□□ 0.39
CXCL16-201ENST00000293778 AKR1C4P17516 323 aa17.47■□□□□ 0.39
CXCL16-201ENST00000293778 GFRA1P56159 465 aa17.47■□□□□ 0.39
CXCL16-201ENST00000293778 FGL1Q08830 312 aa17.47■□□□□ 0.39
CXCL16-201ENST00000293778 SLC16A14Q7RTX9 510 aa17.47■□□□□ 0.39
CXCL16-201ENST00000293778 SEMA6DQ8NFY4 1073 aa17.47■□□□□ 0.39
CXCL16-201ENST00000293778 OR2AE1Q8NHA4 323 aa17.47■□□□□ 0.39
CXCL16-201ENST00000293778 TERB2Q8NHR7 220 aa17.47■□□□□ 0.39
CXCL16-201ENST00000293778 ST8SIA4Q92187 359 aa17.47■□□□□ 0.39
CXCL16-201ENST00000293778 FBXW5Q969U6 566 aa17.47■□□□□ 0.39
CXCL16-201ENST00000293778 OR5H14A6NHG9 310 aa17.46■□□□□ 0.39
CXCL16-201ENST00000293778 FOXI3A8MTJ6 420 aaPredicted RBP17.46■□□□□ 0.39
CXCL16-201ENST00000293778 EFSO43281 561 aa17.46■□□□□ 0.39
CXCL16-201ENST00000293778 VAMP1P23763 118 aa17.46■□□□□ 0.39
CXCL16-201ENST00000293778 BLVRBP30043 206 aaPredicted RBP17.46■□□□□ 0.39
CXCL16-201ENST00000293778 DLSTP36957 453 aa17.46■□□□□ 0.39
CXCL16-201ENST00000293778 SMUG1Q53HV7 270 aa17.46■□□□□ 0.39
CXCL16-201ENST00000293778 TOR2AQ5JU69 321 aa17.46■□□□□ 0.39
CXCL16-201ENST00000293778 GSG1LQ6UXU4 331 aa17.46■□□□□ 0.39
CXCL16-201ENST00000293778 ARRDC1Q8N5I2 433 aa17.46■□□□□ 0.39
CXCL16-201ENST00000293778 CPNE4Q96A23 557 aaPredicted RBP17.46■□□□□ 0.39
CXCL16-201ENST00000293778 ZNF845Q96IR2 970 aaPredicted RBP17.46■□□□□ 0.39
CXCL16-201ENST00000293778 FOXB1Q99853 325 aa17.46■□□□□ 0.39
CXCL16-201ENST00000293778 ELL3Q9HB65 397 aaPredicted RBP17.46■□□□□ 0.39
CXCL16-201ENST00000293778 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP17.46■□□□□ 0.39
CXCL16-201ENST00000293778 KIF25Q9UIL4 384 aa17.46■□□□□ 0.39
CXCL16-201ENST00000293778 B3GALNT1O75752 331 aa17.45■□□□□ 0.38
CXCL16-201ENST00000293778 PATE4P0C8F1 98 aa17.45■□□□□ 0.38
CXCL16-201ENST00000293778 HLA-GP17693 338 aa17.45■□□□□ 0.38
CXCL16-201ENST00000293778 HGFACQ04756 655 aa17.45■□□□□ 0.38
CXCL16-201ENST00000293778 CEACAM16Q2WEN9 425 aa17.45■□□□□ 0.38
CXCL16-201ENST00000293778 REEP6Q96HR9 211 aa17.45■□□□□ 0.38
CXCL16-201ENST00000293778 GPR173Q9NS66 373 aa17.45■□□□□ 0.38
CXCL16-201ENST00000293778 A0A1W2PNU3 283 aaPredicted RBP17.45■□□□□ 0.38
CXCL16-201ENST00000293778 DHRS7CA6NNS2 312 aa17.45■□□□□ 0.38
CXCL16-201ENST00000293778 CYTIPO60759 359 aa17.45■□□□□ 0.38
CXCL16-201ENST00000293778 LCATP04180 440 aa17.45■□□□□ 0.38
CXCL16-201ENST00000293778 RRASP10301 218 aa17.45■□□□□ 0.38
CXCL16-201ENST00000293778 CD59P13987 128 aa17.45■□□□□ 0.38
CXCL16-201ENST00000293778 AMY2BP19961 511 aa17.45■□□□□ 0.38
CXCL16-201ENST00000293778 ACKR3P25106 362 aa17.45■□□□□ 0.38
CXCL16-201ENST00000293778 AGTR1P30556 359 aa17.45■□□□□ 0.38
CXCL16-201ENST00000293778 TAS2R31P59538 309 aa17.45■□□□□ 0.38
CXCL16-201ENST00000293778 RIPPLY2Q5TAB7 128 aa17.45■□□□□ 0.38
CXCL16-201ENST00000293778 OR5H2Q8NGV7 314 aa17.45■□□□□ 0.38
CXCL16-201ENST00000293778 AKR7LQ8NHP1 331 aa17.45■□□□□ 0.38
CXCL16-201ENST00000293778 CASTOR1Q8WTX7 329 aa17.45■□□□□ 0.38
CXCL16-201ENST00000293778 ABHD3Q8WU67 409 aa17.45■□□□□ 0.38
CXCL16-201ENST00000293778 TM2D1Q9BX74 207 aa17.45■□□□□ 0.38
CXCL16-201ENST00000293778 PECRQ9BY49 303 aa17.45■□□□□ 0.38
CXCL16-201ENST00000293778 COMMD9Q9P000 198 aa17.45■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 48.7 ms