RNA–Protein interactions for RNA: ENST00000275036.11

HMGN3-201, Transcript of high mobility group nucleosomal binding domain 3, humanhuman

TSL 1 (best) BASIC

Gene HMGN3, Length 831 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN3-201ENST00000275036 CFPP27918 469 aa11.98□□□□□ -0.49
HMGN3-201ENST00000275036 DCTDP32321 178 aa11.98□□□□□ -0.49
HMGN3-201ENST00000275036 UBA52P62987 128 aaKnown RBP11.98□□□□□ -0.49
HMGN3-201ENST00000275036 ACTG1P63261 375 aa11.98□□□□□ -0.49
HMGN3-201ENST00000275036 DMRTC1Q5HYR2 192 aa11.98□□□□□ -0.49
HMGN3-201ENST00000275036 DUX4L9Q6RFH8 374 aaPredicted RBP11.98□□□□□ -0.49
HMGN3-201ENST00000275036 ZNF322Q6U7Q0 402 aaPredicted RBP11.98□□□□□ -0.49
HMGN3-201ENST00000275036 PLEKHG7Q6ZR37 379 aa11.98□□□□□ -0.49
HMGN3-201ENST00000275036 CCDC121Q6ZUS5 278 aa11.98□□□□□ -0.49
HMGN3-201ENST00000275036 KRT74Q7RTS7 529 aa11.98□□□□□ -0.49
HMGN3-201ENST00000275036 SSX6Q7RTT6 188 aa11.98□□□□□ -0.49
HMGN3-201ENST00000275036 FGFRL1Q8N441 504 aa11.98□□□□□ -0.49
HMGN3-201ENST00000275036 GALNT4Q8N4A0 578 aa11.98□□□□□ -0.49
HMGN3-201ENST00000275036 ASB17Q8WXJ9 295 aa11.98□□□□□ -0.49
HMGN3-201ENST00000275036 OR5P3Q8WZ94 311 aa11.98□□□□□ -0.49
HMGN3-201ENST00000275036 PIGCQ92535 297 aa11.98□□□□□ -0.49
HMGN3-201ENST00000275036 NUDT16L1Q9BRJ7 211 aaKnown RBP11.98□□□□□ -0.49
HMGN3-201ENST00000275036 RNPEPL1Q9HAU8 725 aa11.98□□□□□ -0.49
HMGN3-201ENST00000275036 GPR84Q9NQS5 396 aa11.98□□□□□ -0.49
HMGN3-201ENST00000275036 HAO2Q9NYQ3 351 aa11.98□□□□□ -0.49
HMGN3-201ENST00000275036 H2AFY2Q9P0M6 372 aaPredicted RBP11.98□□□□□ -0.49
HMGN3-201ENST00000275036 DUX4Q9UBX2 424 aa11.98□□□□□ -0.49
HMGN3-201ENST00000275036 ENOPH1Q9UHY7 261 aa11.98□□□□□ -0.49
HMGN3-201ENST00000275036 ZNF391Q9UJN7 358 aa11.98□□□□□ -0.49
HMGN3-201ENST00000275036 IKZF2Q9UKS7 526 aa11.98□□□□□ -0.49
HMGN3-201ENST00000275036 NUP50Q9UKX7 468 aa11.98□□□□□ -0.49
HMGN3-201ENST00000275036 MPC1Q9Y5U8 109 aa11.98□□□□□ -0.49
HMGN3-201ENST00000275036 TMEM14AQ9Y6G1 99 aa11.98□□□□□ -0.49
HMGN3-201ENST00000275036 ACOD1A6NK06 481 aa11.97□□□□□ -0.49
HMGN3-201ENST00000275036 TRIM77I1YAP6 450 aa11.97□□□□□ -0.49
HMGN3-201ENST00000275036 TTRP02766 147 aa11.97□□□□□ -0.49
HMGN3-201ENST00000275036 PPIAL4GP0DN37 164 aa11.97□□□□□ -0.49
HMGN3-201ENST00000275036 CFHR2P36980 270 aa11.97□□□□□ -0.49
HMGN3-201ENST00000275036 COMPP49747 757 aaPredicted RBP11.97□□□□□ -0.49
HMGN3-201ENST00000275036 RIDAP52758 137 aaKnown RBP11.97□□□□□ -0.49
HMGN3-201ENST00000275036 IL5RAQ01344 420 aa11.97□□□□□ -0.49
HMGN3-201ENST00000275036 KCNJ8Q15842 424 aa11.97□□□□□ -0.49
HMGN3-201ENST00000275036 FAM76BQ5HYJ3 339 aa11.97□□□□□ -0.49
HMGN3-201ENST00000275036 BTNL3Q6UXE8 466 aa11.97□□□□□ -0.49
HMGN3-201ENST00000275036 C12orf54Q6X4T0 127 aa11.97□□□□□ -0.49
HMGN3-201ENST00000275036 GID4Q8IVV7 300 aa11.97□□□□□ -0.49
HMGN3-201ENST00000275036 FTMTQ8N4E7 242 aa11.97□□□□□ -0.49
HMGN3-201ENST00000275036 OR51G2Q8NGK0 314 aa11.97□□□□□ -0.49
HMGN3-201ENST00000275036 OR51E1Q8TCB6 317 aa11.97□□□□□ -0.49
HMGN3-201ENST00000275036 RPL3LQ92901 407 aaKnown RBP11.97□□□□□ -0.49
HMGN3-201ENST00000275036 UPRTQ96BW1 309 aa11.97□□□□□ -0.49
HMGN3-201ENST00000275036 FAM71F1Q96KD3 344 aaPredicted RBP11.97□□□□□ -0.49
HMGN3-201ENST00000275036 TECTBQ96PL2 329 aa11.97□□□□□ -0.49
HMGN3-201ENST00000275036 DUX5Q96PT3 197 aa11.97□□□□□ -0.49
HMGN3-201ENST00000275036 MICU1Q9BPX6 476 aa11.97□□□□□ -0.49
HMGN3-201ENST00000275036 RBM4BQ9BQ04 359 aaKnown RBP11.97□□□□□ -0.49
HMGN3-201ENST00000275036 RTL8AQ9BWD3 113 aa11.97□□□□□ -0.49
HMGN3-201ENST00000275036 CLN6Q9NWW5 311 aa11.97□□□□□ -0.49
HMGN3-201ENST00000275036 NUFIP1Q9UHK0 495 aaKnown RBP11.97□□□□□ -0.49
HMGN3-201ENST00000275036 MRM2Q9UI43 246 aaKnown RBP11.97□□□□□ -0.49
HMGN3-201ENST00000275036 ZNF816-ZNF321PA0A0X1KG74 233 aa11.96□□□□□ -0.49
HMGN3-201ENST00000275036 ANXA2P2A6NMY6 339 aa11.96□□□□□ -0.49
HMGN3-201ENST00000275036 SRRM5B3KS81 715 aa11.96□□□□□ -0.49
HMGN3-201ENST00000275036 APOL3O95236 402 aa11.96□□□□□ -0.49
HMGN3-201ENST00000275036 ALPLP05186 524 aa11.96□□□□□ -0.49
HMGN3-201ENST00000275036 AMY2BP19961 511 aa11.96□□□□□ -0.49
HMGN3-201ENST00000275036 FPR2P25090 351 aa11.96□□□□□ -0.49
HMGN3-201ENST00000275036 MAP2K3P46734 347 aa11.96□□□□□ -0.49
HMGN3-201ENST00000275036 NPY4RP50391 375 aa11.96□□□□□ -0.49
HMGN3-201ENST00000275036 SNCBQ16143 134 aa11.96□□□□□ -0.49
HMGN3-201ENST00000275036 ZNF829Q3KNS6 432 aaPredicted RBP11.96□□□□□ -0.49
HMGN3-201ENST00000275036 CEP78Q5JTW2 689 aa11.96□□□□□ -0.49
HMGN3-201ENST00000275036 DOK3Q7L591 496 aa11.96□□□□□ -0.49
HMGN3-201ENST00000275036 ZDHHC23Q8IYP9 409 aa11.96□□□□□ -0.49
HMGN3-201ENST00000275036 SCCPDHQ8NBX0 429 aa11.96□□□□□ -0.49
HMGN3-201ENST00000275036 FAM81AQ8TBF8 368 aa11.96□□□□□ -0.49
HMGN3-201ENST00000275036 UBE2FQ969M7 185 aa11.96□□□□□ -0.49
HMGN3-201ENST00000275036 RNF170Q96K19 258 aa11.96□□□□□ -0.49
HMGN3-201ENST00000275036 JMJD8Q96S16 334 aa11.96□□□□□ -0.49
HMGN3-201ENST00000275036 MNTQ99583 582 aa11.96□□□□□ -0.49
HMGN3-201ENST00000275036 TBX5Q99593 518 aa11.96□□□□□ -0.49
HMGN3-201ENST00000275036 WDR13Q9H1Z4 485 aa11.96□□□□□ -0.49
HMGN3-201ENST00000275036 TRIM36Q9NQ86 728 aa11.96□□□□□ -0.49
HMGN3-201ENST00000275036 ERVK-18Q9QC07 812 aa11.96□□□□□ -0.49
HMGN3-201ENST00000275036 KAAG1Q9UBP8 84 aa11.96□□□□□ -0.49
HMGN3-201ENST00000275036 WARS2Q9UGM6 360 aaKnown RBP11.96□□□□□ -0.49
HMGN3-201ENST00000275036 TRAV40A0A0B4J280 105 aa11.95□□□□□ -0.5
HMGN3-201ENST00000275036 MDFIC2A0A1B0GVS7 189 aa11.95□□□□□ -0.5
HMGN3-201ENST00000275036 DNAJC9-AS1A6NH13 148 aa11.95□□□□□ -0.5
HMGN3-201ENST00000275036 TMEM210A6NLX4 147 aa11.95□□□□□ -0.5
HMGN3-201ENST00000275036 E9PQ18 207 aa11.95□□□□□ -0.5
HMGN3-201ENST00000275036 ZNF670-ZNF695F2Z2N8 137 aa11.95□□□□□ -0.5
HMGN3-201ENST00000275036 DVL1O14640 695 aa11.95□□□□□ -0.5
HMGN3-201ENST00000275036 EI24O14681 340 aa11.95□□□□□ -0.5
HMGN3-201ENST00000275036 NDUFA2O43678 99 aa11.95□□□□□ -0.5
HMGN3-201ENST00000275036 ENSAO43768 121 aaKnown RBP11.95□□□□□ -0.5
HMGN3-201ENST00000275036 PLATP00750 562 aa11.95□□□□□ -0.5
HMGN3-201ENST00000275036 TFF1P04155 84 aa11.95□□□□□ -0.5
HMGN3-201ENST00000275036 MUC1P15941 1255 aaPredicted RBP11.95□□□□□ -0.5
HMGN3-201ENST00000275036 FAHP16930 419 aa11.95□□□□□ -0.5
HMGN3-201ENST00000275036 HTR1FP30939 366 aa11.95□□□□□ -0.5
HMGN3-201ENST00000275036 GPM6AP51674 278 aa11.95□□□□□ -0.5
HMGN3-201ENST00000275036 GMFBP60983 142 aa11.95□□□□□ -0.5
HMGN3-201ENST00000275036 FGF12P61328 243 aa11.95□□□□□ -0.5
HMGN3-201ENST00000275036 WDR38Q5JTN6 314 aa11.95□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms