RNA–Protein interactions for RNA: ENST00000268049.11

USP3-201, Transcript of ubiquitin specific peptidase 3, humanhuman

TSL 5 BASIC

Gene USP3, Length 5,311 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-201ENST00000268049 RSRP1Q9BUV0 290 aa7.03□□□□□ -1.28
USP3-201ENST00000268049 TUBA4BQ9H853 241 aa7.03□□□□□ -1.28
USP3-201ENST00000268049 THYN1Q9P016 225 aa7.03□□□□□ -1.28
USP3-201ENST00000268049 SLC23A2Q9UGH3 650 aa7.03□□□□□ -1.28
USP3-201ENST00000268049 IL17BQ9UHF5 180 aa7.03□□□□□ -1.28
USP3-201ENST00000268049 HIST1H3AP68431 136 aa7.03□□□□□ -1.28
USP3-201ENST00000268049 ACVR1Q04771 509 aa7.03□□□□□ -1.28
USP3-201ENST00000268049 STEAP1BQ6NZ63 245 aa7.03□□□□□ -1.28
USP3-201ENST00000268049 MDGA2Q7Z553 956 aa7.03□□□□□ -1.28
USP3-201ENST00000268049 LINC00469Q8N7U9 141 aa7.03□□□□□ -1.28
USP3-201ENST00000268049 ZNF740Q8NDX6 193 aa7.03□□□□□ -1.28
USP3-201ENST00000268049 OR8D4Q8NGM9 314 aa7.03□□□□□ -1.28
USP3-201ENST00000268049 APIPQ96GX9 242 aa7.03□□□□□ -1.28
USP3-201ENST00000268049 UBQLN3Q9H347 655 aa7.03□□□□□ -1.28
USP3-201ENST00000268049 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP7.03□□□□□ -1.28
USP3-201ENST00000268049 ZMIZ1Q9ULJ6 1067 aa7.03□□□□□ -1.28
USP3-201ENST00000268049 RHBDD3Q9Y3P4 386 aa7.03□□□□□ -1.28
USP3-201ENST00000268049 GPR45Q9Y5Y3 372 aa7.03□□□□□ -1.28
USP3-201ENST00000268049 MAP1BP46821 2468 aaKnown RBP7.03□□□□□ -1.28
USP3-201ENST00000268049 ZNF638Q14966 1978 aaKnown RBP7.03□□□□□ -1.28
USP3-201ENST00000268049 G3V3Q6 166 aa7.03□□□□□ -1.28
USP3-201ENST00000268049 SYT5O00445 386 aa7.03□□□□□ -1.28
USP3-201ENST00000268049 H2AFB1P0C5Y9 115 aa7.03□□□□□ -1.28
USP3-201ENST00000268049 FCER1GP30273 86 aa7.03□□□□□ -1.28
USP3-201ENST00000268049 AKR1C3P42330 323 aa7.03□□□□□ -1.28
USP3-201ENST00000268049 CSN1S1P47710 185 aa7.03□□□□□ -1.28
USP3-201ENST00000268049 DAPP51397 102 aa7.03□□□□□ -1.28
USP3-201ENST00000268049 THEM4Q5T1C6 240 aa7.03□□□□□ -1.28
USP3-201ENST00000268049 OGFOD3Q6PK18 319 aa7.03□□□□□ -1.28
USP3-201ENST00000268049 THSD4Q6ZMP0 1018 aa7.03□□□□□ -1.28
USP3-201ENST00000268049 C17orf78Q8N4C9 275 aa7.03□□□□□ -1.28
USP3-201ENST00000268049 SLC35G3Q8N808 338 aa7.03□□□□□ -1.28
USP3-201ENST00000268049 BPIFCQ8NFQ6 507 aa7.03□□□□□ -1.28
USP3-201ENST00000268049 OR51L1Q8NGJ5 315 aa7.03□□□□□ -1.28
USP3-201ENST00000268049 BPIFA2Q96DR5 249 aa7.03□□□□□ -1.28
USP3-201ENST00000268049 PRRC1Q96M27 445 aa7.03□□□□□ -1.28
USP3-201ENST00000268049 TSSK2Q96PF2 358 aa7.03□□□□□ -1.28
USP3-201ENST00000268049 DCTN5Q9BTE1 182 aa7.03□□□□□ -1.28
USP3-201ENST00000268049 ELOVL1Q9BW60 279 aa7.03□□□□□ -1.28
USP3-201ENST00000268049 PARP12Q9H0J9 701 aaKnown RBP7.03□□□□□ -1.28
USP3-201ENST00000268049 SIDT1Q9NXL6 827 aaKnown RBP7.03□□□□□ -1.28
USP3-201ENST00000268049 EHFQ9NZC4 300 aa7.03□□□□□ -1.28
USP3-201ENST00000268049 LEUTXA8MZ59 168 aa7.02□□□□□ -1.29
USP3-201ENST00000268049 SLC2A1P11166 492 aa7.02□□□□□ -1.29
USP3-201ENST00000268049 PSMB10P40306 273 aa7.02□□□□□ -1.29
USP3-201ENST00000268049 NBL1P41271 181 aa7.02□□□□□ -1.29
USP3-201ENST00000268049 TAS2R46P59540 309 aa7.02□□□□□ -1.29
USP3-201ENST00000268049 RPL24P83731 157 aaKnown RBP7.02□□□□□ -1.29
USP3-201ENST00000268049 P2RY6Q15077 328 aa7.02□□□□□ -1.29
USP3-201ENST00000268049 LETMD1Q6P1Q0 360 aa7.02□□□□□ -1.29
USP3-201ENST00000268049 BTNL8Q6UX41 500 aa7.02□□□□□ -1.29
USP3-201ENST00000268049 LRRTM1Q86UE6 522 aa7.02□□□□□ -1.29
USP3-201ENST00000268049 NECAP1Q8NC96 275 aa7.02□□□□□ -1.29
USP3-201ENST00000268049 OR2Z1Q8NG97 314 aa7.02□□□□□ -1.29
USP3-201ENST00000268049 OR4S1Q8NGB4 309 aa7.02□□□□□ -1.29
USP3-201ENST00000268049 OR8J2Q8NGG1 315 aa7.02□□□□□ -1.29
USP3-201ENST00000268049 OR5R1Q8NH85 324 aa7.02□□□□□ -1.29
USP3-201ENST00000268049 SRRQ9GZT4 340 aa7.02□□□□□ -1.29
USP3-201ENST00000268049 TUBD1Q9UJT1 453 aa7.02□□□□□ -1.29
USP3-201ENST00000268049 RALYQ9UKM9 306 aaKnown RBP7.02□□□□□ -1.29
USP3-201ENST00000268049 hADV38S2A0JD32 116 aa7.02□□□□□ -1.29
USP3-201ENST00000268049 JTBO76095 146 aa7.02□□□□□ -1.29
USP3-201ENST00000268049 TTRP02766 147 aa7.02□□□□□ -1.29
USP3-201ENST00000268049 HPNP05981 417 aa7.02□□□□□ -1.29
USP3-201ENST00000268049 PRPH2P23942 346 aa7.02□□□□□ -1.29
USP3-201ENST00000268049 FPR3P25089 353 aa7.02□□□□□ -1.29
USP3-201ENST00000268049 HTR2CP28335 458 aa7.02□□□□□ -1.29
USP3-201ENST00000268049 PIN1Q13526 163 aaPredicted RBP7.02□□□□□ -1.29
USP3-201ENST00000268049 TRAT1Q6PIZ9 186 aa7.02□□□□□ -1.29
USP3-201ENST00000268049 Q6ZPB1 254 aaPredicted RBP7.02□□□□□ -1.29
USP3-201ENST00000268049 Q8IYB0 196 aa7.02□□□□□ -1.29
USP3-201ENST00000268049 ZNF383Q8NA42 475 aa7.02□□□□□ -1.29
USP3-201ENST00000268049 OR51F2Q8NH61 342 aa7.02□□□□□ -1.29
USP3-201ENST00000268049 FAM222BQ8WU58 562 aa7.02□□□□□ -1.29
USP3-201ENST00000268049 ATOH8Q96SQ7 321 aa7.02□□□□□ -1.29
USP3-201ENST00000268049 OR51I2Q9H344 312 aa7.02□□□□□ -1.29
USP3-201ENST00000268049 ZNF331Q9NQX6 463 aaPredicted RBP7.02□□□□□ -1.29
USP3-201ENST00000268049 GPR173Q9NS66 373 aa7.02□□□□□ -1.29
USP3-201ENST00000268049 STRAPQ9Y3F4 350 aaKnown RBP7.02□□□□□ -1.29
USP3-201ENST00000268049 NUP205Q92621 2012 aa7.02□□□□□ -1.29
USP3-201ENST00000268049 BET1O15155 118 aa7.02□□□□□ -1.29
USP3-201ENST00000268049 AKR7A3O95154 331 aa7.02□□□□□ -1.29
USP3-201ENST00000268049 SFTA3P0C7M3 94 aa7.02□□□□□ -1.29
USP3-201ENST00000268049 KITLGP21583 273 aa7.02□□□□□ -1.29
USP3-201ENST00000268049 ENDOGQ14249 297 aaKnown RBP7.02□□□□□ -1.29
USP3-201ENST00000268049 IAH1Q2TAA2 248 aaPredicted RBP7.02□□□□□ -1.29
USP3-201ENST00000268049 IL34Q6ZMJ4 242 aa7.02□□□□□ -1.29
USP3-201ENST00000268049 BAP18Q8IXM2 172 aa7.02□□□□□ -1.29
USP3-201ENST00000268049 CYB561A3Q8NBI2 242 aa7.02□□□□□ -1.29
USP3-201ENST00000268049 OR2G3Q8NGZ4 309 aa7.02□□□□□ -1.29
USP3-201ENST00000268049 VN1R1Q9GZP7 353 aa7.02□□□□□ -1.29
USP3-201ENST00000268049 SLC35D1Q9NTN3 355 aa7.02□□□□□ -1.29
USP3-201ENST00000268049 ACOXLQ9NUZ1 547 aa7.02□□□□□ -1.29
USP3-201ENST00000268049 NTMQ9P121 344 aa7.02□□□□□ -1.29
USP3-201ENST00000268049 PIGLQ9Y2B2 252 aa7.02□□□□□ -1.29
USP3-201ENST00000268049 RLFQ13129 1914 aa7.02□□□□□ -1.29
USP3-201ENST00000268049 ZSWIM8A7E2V4 1837 aa7.02□□□□□ -1.29
USP3-201ENST00000268049 TRDV1A0A1B0GX56 115 aa7.02□□□□□ -1.29
USP3-201ENST00000268049 C17orf112F2Z3M2 114 aa7.02□□□□□ -1.29
USP3-201ENST00000268049 GPRIN2O60269 458 aa7.02□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms