RNA–Protein interactions for RNA: ENST00000265619.6

VAPB-201, Transcript of VAMP associated protein B and C, humanhuman

TSL 2

Gene VAPB, Length 3,596 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPB-201ENST00000265619 WDFY3Q8IZQ1 3526 aa7.79□□□□□ -1.16
VAPB-201ENST00000265619 TP53I11O14683 189 aa7.79□□□□□ -1.16
VAPB-201ENST00000265619 SPINT1O43278 529 aa7.79□□□□□ -1.16
VAPB-201ENST00000265619 LINC00614P0C842 121 aa7.79□□□□□ -1.16
VAPB-201ENST00000265619 NTSR1P30989 418 aa7.79□□□□□ -1.16
VAPB-201ENST00000265619 WNT5AP41221 380 aa7.79□□□□□ -1.16
VAPB-201ENST00000265619 CDKN2AP42771 156 aaKnown RBP7.79□□□□□ -1.16
VAPB-201ENST00000265619 SSR2P43308 183 aa7.79□□□□□ -1.16
VAPB-201ENST00000265619 CAMLGP49069 296 aa7.79□□□□□ -1.16
VAPB-201ENST00000265619 CX3CR1P49238 355 aa7.79□□□□□ -1.16
VAPB-201ENST00000265619 ELLP55199 621 aaPredicted RBP7.79□□□□□ -1.16
VAPB-201ENST00000265619 UBE2KP61086 200 aa7.79□□□□□ -1.16
VAPB-201ENST00000265619 PAX5Q02548 391 aa7.79□□□□□ -1.16
VAPB-201ENST00000265619 GLO1Q04760 184 aa7.79□□□□□ -1.16
VAPB-201ENST00000265619 GAGE1Q13065 139 aa7.79□□□□□ -1.16
VAPB-201ENST00000265619 IL15RAQ13261 267 aa7.79□□□□□ -1.16
VAPB-201ENST00000265619 GAS6Q14393 721 aa7.79□□□□□ -1.16
VAPB-201ENST00000265619 FBXW9Q5XUX1 488 aa7.79□□□□□ -1.16
VAPB-201ENST00000265619 ZNF776Q68DI1 518 aaPredicted RBP7.79□□□□□ -1.16
VAPB-201ENST00000265619 RTL6Q6ICC9 239 aa7.79□□□□□ -1.16
VAPB-201ENST00000265619 AMZ2Q86W34 360 aa7.79□□□□□ -1.16
VAPB-201ENST00000265619 OR4N5Q8IXE1 308 aa7.79□□□□□ -1.16
VAPB-201ENST00000265619 SLC35G3Q8N808 338 aa7.79□□□□□ -1.16
VAPB-201ENST00000265619 SHDQ96IW2 340 aa7.79□□□□□ -1.16
VAPB-201ENST00000265619 WDR76Q9H967 626 aa7.79□□□□□ -1.16
VAPB-201ENST00000265619 PLEKHA2Q9HB19 425 aa7.79□□□□□ -1.16
VAPB-201ENST00000265619 CUTCQ9NTM9 273 aa7.79□□□□□ -1.16
VAPB-201ENST00000265619 POLR3KQ9Y2Y1 108 aaPredicted RBP7.79□□□□□ -1.16
VAPB-201ENST00000265619 MED31Q9Y3C7 131 aa7.79□□□□□ -1.16
VAPB-201ENST00000265619 ASCC3Q8N3C0 2202 aaKnown RBP7.78□□□□□ -1.16
VAPB-201ENST00000265619 CDRT15L2A8MXV6 281 aa7.78□□□□□ -1.16
VAPB-201ENST00000265619 K7EQS6 105 aa7.78□□□□□ -1.16
VAPB-201ENST00000265619 SLC17A2O00624 439 aa7.78□□□□□ -1.16
VAPB-201ENST00000265619 P2RX6O15547 441 aa7.78□□□□□ -1.16
VAPB-201ENST00000265619 RPLP1P05386 114 aaKnown RBP7.78□□□□□ -1.16
VAPB-201ENST00000265619 DANCRP0C864 163 aa7.78□□□□□ -1.16
VAPB-201ENST00000265619 GNB3P16520 340 aa7.78□□□□□ -1.16
VAPB-201ENST00000265619 CHATP28329 748 aa7.78□□□□□ -1.16
VAPB-201ENST00000265619 RPL12P30050 165 aaKnown RBP7.78□□□□□ -1.16
VAPB-201ENST00000265619 C1orf61Q13536 156 aa7.78□□□□□ -1.16
VAPB-201ENST00000265619 DEGS2Q6QHC5 323 aa7.78□□□□□ -1.16
VAPB-201ENST00000265619 VHLLQ6RSH7 139 aa7.78□□□□□ -1.16
VAPB-201ENST00000265619 Q6ZVH6 145 aa7.78□□□□□ -1.16
VAPB-201ENST00000265619 RNF144BQ7Z419 303 aa7.78□□□□□ -1.16
VAPB-201ENST00000265619 FAM210BQ96KR6 192 aa7.78□□□□□ -1.16
VAPB-201ENST00000265619 ADAD1Q96M93 576 aaKnown RBP7.78□□□□□ -1.16
VAPB-201ENST00000265619 MRI1Q9BV20 369 aa7.78□□□□□ -1.16
VAPB-201ENST00000265619 AHSPQ9NZD4 102 aa7.78□□□□□ -1.16
VAPB-201ENST00000265619 SPTBN2O15020 2390 aa7.78□□□□□ -1.16
VAPB-201ENST00000265619 GPR179Q6PRD1 2367 aa7.78□□□□□ -1.16
VAPB-201ENST00000265619 SIAH2O43255 324 aa7.78□□□□□ -1.16
VAPB-201ENST00000265619 LDB3O75112 727 aa7.78□□□□□ -1.16
VAPB-201ENST00000265619 MMP9P14780 707 aa7.78□□□□□ -1.16
VAPB-201ENST00000265619 CD81P60033 236 aa7.78□□□□□ -1.16
VAPB-201ENST00000265619 COL10A1Q03692 680 aa7.78□□□□□ -1.16
VAPB-201ENST00000265619 WDR38Q5JTN6 314 aa7.78□□□□□ -1.16
VAPB-201ENST00000265619 MEX3BQ6ZN04 569 aaKnown RBP7.78□□□□□ -1.16
VAPB-201ENST00000265619 MAML2Q8IZL2 1156 aaPredicted RBP7.78□□□□□ -1.16
VAPB-201ENST00000265619 OR4X1Q8NH49 305 aa7.78□□□□□ -1.16
VAPB-201ENST00000265619 OR10G6Q8NH81 332 aa7.78□□□□□ -1.16
VAPB-201ENST00000265619 TSEN15Q8WW01 171 aaKnown RBP7.78□□□□□ -1.16
VAPB-201ENST00000265619 ANKRD9Q96BM1 317 aaPredicted RBP7.78□□□□□ -1.16
VAPB-201ENST00000265619 CCDC74BQ96LY2 380 aa7.78□□□□□ -1.16
VAPB-201ENST00000265619 ALG12Q9BV10 488 aa7.78□□□□□ -1.16
VAPB-201ENST00000265619 METTL8Q9H825 291 aaKnown RBP7.78□□□□□ -1.16
VAPB-201ENST00000265619 SUSD2Q9UGT4 822 aa7.78□□□□□ -1.16
VAPB-201ENST00000265619 MTCH2Q9Y6C9 303 aa7.78□□□□□ -1.16
VAPB-201ENST00000265619 CACNA1EQ15878 2313 aa7.78□□□□□ -1.16
VAPB-201ENST00000265619 A6NIZ1 184 aa7.77□□□□□ -1.16
VAPB-201ENST00000265619 PNPP00491 289 aa7.77□□□□□ -1.16
VAPB-201ENST00000265619 GPR3P46089 330 aa7.77□□□□□ -1.16
VAPB-201ENST00000265619 PRLHRP49683 370 aa7.77□□□□□ -1.16
VAPB-201ENST00000265619 RAP1BP61224 184 aa7.77□□□□□ -1.16
VAPB-201ENST00000265619 MTSS1LQ765P7 747 aa7.77□□□□□ -1.16
VAPB-201ENST00000265619 RABEPKQ7Z6M1 372 aa7.77□□□□□ -1.16
VAPB-201ENST00000265619 CYB561D1Q8N8Q1 229 aa7.77□□□□□ -1.16
VAPB-201ENST00000265619 HSD17B11Q8NBQ5 300 aa7.77□□□□□ -1.16
VAPB-201ENST00000265619 CCL4L1Q8NHW4 92 aa7.77□□□□□ -1.16
VAPB-201ENST00000265619 STT3BQ8TCJ2 826 aa7.77□□□□□ -1.16
VAPB-201ENST00000265619 SRA1Q9HD15 236 aaKnown RBP7.77□□□□□ -1.16
VAPB-201ENST00000265619 PRDM6Q9NQX0 595 aa7.77□□□□□ -1.16
VAPB-201ENST00000265619 TAS2R4Q9NYW5 299 aa7.77□□□□□ -1.16
VAPB-201ENST00000265619 ZNF581Q9P0T4 197 aa7.77□□□□□ -1.16
VAPB-201ENST00000265619 COLQQ9Y215 455 aaPredicted RBP7.77□□□□□ -1.16
VAPB-201ENST00000265619 SLC5A6Q9Y289 635 aa7.77□□□□□ -1.16
VAPB-201ENST00000265619 A0A1B0GUS0 222 aa7.77□□□□□ -1.17
VAPB-201ENST00000265619 DNAJB6O75190 326 aa7.77□□□□□ -1.17
VAPB-201ENST00000265619 DIRAS3O95661 229 aa7.77□□□□□ -1.17
VAPB-201ENST00000265619 BRS3P32247 399 aa7.77□□□□□ -1.17
VAPB-201ENST00000265619 SLC37A1P57057 533 aa7.77□□□□□ -1.17
VAPB-201ENST00000265619 SLC35A1P78382 337 aa7.77□□□□□ -1.17
VAPB-201ENST00000265619 CDK3Q00526 305 aa7.77□□□□□ -1.17
VAPB-201ENST00000265619 SPOCK1Q08629 439 aa7.77□□□□□ -1.17
VAPB-201ENST00000265619 AGBL4Q5VU57 503 aa7.77□□□□□ -1.17
VAPB-201ENST00000265619 WDR25Q64LD2 544 aaPredicted RBP7.77□□□□□ -1.17
VAPB-201ENST00000265619 ZNF705AQ6ZN79 300 aaPredicted RBP7.77□□□□□ -1.17
VAPB-201ENST00000265619 TMEM183AQ8IXX5 376 aa7.77□□□□□ -1.17
VAPB-201ENST00000265619 ZNF595Q8IYB9 648 aa7.77□□□□□ -1.17
VAPB-201ENST00000265619 ZDHHC22Q8N966 263 aa7.77□□□□□ -1.17
VAPB-201ENST00000265619 Q8NFD4 153 aa7.77□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 114.7 ms