RNA–Protein interactions for RNA: ENST00000263073.10

SMG6-201, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMG6, Length 5,960 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-201ENST00000263073 ARRDC5A6NEK1 342 aa10.84□□□□□ -0.67
SMG6-201ENST00000263073 FAM24AA6NFZ4 105 aa10.84□□□□□ -0.67
SMG6-201ENST00000263073 MPZL1O95297 269 aa10.84□□□□□ -0.67
SMG6-201ENST00000263073 KRASP01116 189 aa10.84□□□□□ -0.67
SMG6-201ENST00000263073 COX5AP20674 150 aa10.84□□□□□ -0.67
SMG6-201ENST00000263073 WNT3P56703 355 aa10.84□□□□□ -0.67
SMG6-201ENST00000263073 DMWDQ09019 674 aa10.84□□□□□ -0.67
SMG6-201ENST00000263073 GTF2H5Q6ZYL4 71 aa10.84□□□□□ -0.67
SMG6-201ENST00000263073 FZR1Q9UM11 496 aa10.84□□□□□ -0.67
SMG6-201ENST00000263073 F12P00748 615 aaPredicted RBP10.84□□□□□ -0.67
SMG6-201ENST00000263073 MEOX2P50222 304 aa10.84□□□□□ -0.67
SMG6-201ENST00000263073 ZNF574Q6ZN55 896 aaPredicted RBP10.84□□□□□ -0.67
SMG6-201ENST00000263073 ADGRG3Q86Y34 549 aa10.84□□□□□ -0.67
SMG6-201ENST00000263073 OSR2Q8N2R0 312 aa10.84□□□□□ -0.67
SMG6-201ENST00000263073 A0A0A6YYD5 115 aa10.84□□□□□ -0.67
SMG6-201ENST00000263073 ICAM2P13598 275 aa10.84□□□□□ -0.67
SMG6-201ENST00000263073 NKAIN1Q4KMZ8 207 aa10.84□□□□□ -0.67
SMG6-201ENST00000263073 MRGPREQ86SM8 312 aa10.84□□□□□ -0.67
SMG6-201ENST00000263073 ZDHHC19Q8WVZ1 309 aaPredicted RBP10.84□□□□□ -0.67
SMG6-201ENST00000263073 FAAP24Q9BTP7 215 aa10.84□□□□□ -0.67
SMG6-201ENST00000263073 CHRNB4P30926 498 aa10.84□□□□□ -0.67
SMG6-201ENST00000263073 OR3A4PP47883 348 aa10.84□□□□□ -0.67
SMG6-201ENST00000263073 PPP1CBP62140 327 aa10.84□□□□□ -0.67
SMG6-201ENST00000263073 C6orf201Q7Z4U5 140 aa10.84□□□□□ -0.67
SMG6-201ENST00000263073 LRFN3Q9BTN0 628 aa10.84□□□□□ -0.67
SMG6-201ENST00000263073 BCL2L10Q9HD36 194 aa10.84□□□□□ -0.67
SMG6-201ENST00000263073 C9orf170A2RU37 121 aa10.84□□□□□ -0.67
SMG6-201ENST00000263073 ADAP1O75689 374 aa10.84□□□□□ -0.67
SMG6-201ENST00000263073 ZFPL1O95159 310 aa10.84□□□□□ -0.67
SMG6-201ENST00000263073 CDK5Q00535 292 aa10.84□□□□□ -0.67
SMG6-201ENST00000263073 C11orf40Q8WZ69 217 aa10.84□□□□□ -0.67
SMG6-201ENST00000263073 DDX60Q8IY21 1712 aaKnown RBP10.83□□□□□ -0.68
SMG6-201ENST00000263073 LOC101059915A0A1B0GWI6 518 aaPredicted RBP10.83□□□□□ -0.68
SMG6-201ENST00000263073 RAB5AP20339 215 aa10.83□□□□□ -0.68
SMG6-201ENST00000263073 OR2A1Q8NGT9 310 aa10.83□□□□□ -0.68
SMG6-201ENST00000263073 PELI1Q96FA3 418 aa10.83□□□□□ -0.68
SMG6-201ENST00000263073 TRIB1Q96RU8 372 aa10.83□□□□□ -0.68
SMG6-201ENST00000263073 LIN7CQ9NUP9 197 aaKnown RBP10.83□□□□□ -0.68
SMG6-201ENST00000263073 M0R1B8 84 aa10.83□□□□□ -0.68
SMG6-201ENST00000263073 TTRP02766 147 aa10.83□□□□□ -0.68
SMG6-201ENST00000263073 CT45A10P0DMU9 189 aa10.83□□□□□ -0.68
SMG6-201ENST00000263073 RAC1P63000 192 aa10.83□□□□□ -0.68
SMG6-201ENST00000263073 RPS19BP1Q86WX3 136 aaKnown RBP10.83□□□□□ -0.68
SMG6-201ENST00000263073 OR11H7Q8NGC8 314 aa10.83□□□□□ -0.68
SMG6-201ENST00000263073 NAT6Q93015 286 aa10.83□□□□□ -0.68
SMG6-201ENST00000263073 PRRX2Q99811 253 aa10.83□□□□□ -0.68
SMG6-201ENST00000263073 NUP205Q92621 2012 aa10.83□□□□□ -0.68
SMG6-201ENST00000263073 SHBQ15464 509 aa10.83□□□□□ -0.68
SMG6-201ENST00000263073 MANEAQ5SRI9 462 aa10.83□□□□□ -0.68
SMG6-201ENST00000263073 DHRS7BQ6IAN0 325 aaPredicted RBP10.83□□□□□ -0.68
SMG6-201ENST00000263073 DPF1Q92782 380 aa10.83□□□□□ -0.68
SMG6-201ENST00000263073 CDCA3Q99618 268 aaPredicted RBP10.83□□□□□ -0.68
SMG6-201ENST00000263073 GLI3P10071 1580 aa10.83□□□□□ -0.68
SMG6-201ENST00000263073 SLC17A2O00624 439 aa10.83□□□□□ -0.68
SMG6-201ENST00000263073 LGALS4P56470 323 aa10.83□□□□□ -0.68
SMG6-201ENST00000263073 TSPO2Q5TGU0 170 aa10.83□□□□□ -0.68
SMG6-201ENST00000263073 MRM1Q6IN84 353 aaKnown RBP10.83□□□□□ -0.68
SMG6-201ENST00000263073 PRSS41Q7RTY9 318 aa10.83□□□□□ -0.68
SMG6-201ENST00000263073 S100A7AQ86SG5 101 aa10.83□□□□□ -0.68
SMG6-201ENST00000263073 LINC01465Q8N7H1 131 aa10.83□□□□□ -0.68
SMG6-201ENST00000263073 OR5C1Q8NGR4 320 aa10.83□□□□□ -0.68
SMG6-201ENST00000263073 CD63P08962 238 aa10.83□□□□□ -0.68
SMG6-201ENST00000263073 PRR35P0CG20 571 aa10.83□□□□□ -0.68
SMG6-201ENST00000263073 LIMS3P0CW19 117 aa10.83□□□□□ -0.68
SMG6-201ENST00000263073 LIMS4P0CW20 117 aa10.83□□□□□ -0.68
SMG6-201ENST00000263073 TBPP20226 339 aa10.83□□□□□ -0.68
SMG6-201ENST00000263073 CCR2P41597 374 aa10.83□□□□□ -0.68
SMG6-201ENST00000263073 ZNF793Q6ZN11 406 aa10.83□□□□□ -0.68
SMG6-201ENST00000263073 OR1J1Q8NGS3 322 aa10.83□□□□□ -0.68
SMG6-201ENST00000263073 GOLT1BQ9Y3E0 138 aa10.83□□□□□ -0.68
SMG6-201ENST00000263073 V9GYH0 126 aa10.83□□□□□ -0.68
SMG6-201ENST00000263073 CTAG2O75638 210 aa10.82□□□□□ -0.68
SMG6-201ENST00000263073 CALCRP30988 508 aa10.82□□□□□ -0.68
SMG6-201ENST00000263073 FFAR4Q5NUL3 377 aa10.82□□□□□ -0.68
SMG6-201ENST00000263073 ZDHHC23Q8IYP9 409 aa10.82□□□□□ -0.68
SMG6-201ENST00000263073 ADPRHL1Q8NDY3 354 aa10.82□□□□□ -0.68
SMG6-201ENST00000263073 DUSP18Q8NEJ0 188 aa10.82□□□□□ -0.68
SMG6-201ENST00000263073 OR4D9Q8NGE8 314 aa10.82□□□□□ -0.68
SMG6-201ENST00000263073 SLC25A22Q9H936 323 aa10.82□□□□□ -0.68
SMG6-201ENST00000263073 CACNA1SQ13698 1873 aa10.82□□□□□ -0.68
SMG6-201ENST00000263073 CD200P41217 278 aa10.82□□□□□ -0.68
SMG6-201ENST00000263073 NOVA1P51513 510 aaKnown RBP10.82□□□□□ -0.68
SMG6-201ENST00000263073 Q1RN00 199 aa10.82□□□□□ -0.68
SMG6-201ENST00000263073 OR6S1Q8NH40 331 aa10.82□□□□□ -0.68
SMG6-201ENST00000263073 SARGQ9BW04 601 aa10.82□□□□□ -0.68
SMG6-201ENST00000263073 AMDHD2Q9Y303 409 aa10.82□□□□□ -0.68
SMG6-201ENST00000263073 COL18A1P39060 1754 aa10.82□□□□□ -0.68
SMG6-201ENST00000263073 TUBAL3A6NHL2 446 aa10.82□□□□□ -0.68
SMG6-201ENST00000263073 COX7A2P2O60397 106 aa10.82□□□□□ -0.68
SMG6-201ENST00000263073 CCL2P13500 99 aa10.82□□□□□ -0.68
SMG6-201ENST00000263073 CLDN15P56746 228 aa10.82□□□□□ -0.68
SMG6-201ENST00000263073 TCTAP57738 103 aa10.82□□□□□ -0.68
SMG6-201ENST00000263073 PJVKQ0ZLH3 352 aa10.82□□□□□ -0.68
SMG6-201ENST00000263073 Q7L0L9 218 aa10.82□□□□□ -0.68
SMG6-201ENST00000263073 LSMEM1Q8N8F7 131 aa10.82□□□□□ -0.68
SMG6-201ENST00000263073 OTOSQ8NHW6 89 aa10.82□□□□□ -0.68
SMG6-201ENST00000263073 SPPL3Q8TCT6 385 aa10.82□□□□□ -0.68
SMG6-201ENST00000263073 DDX60LQ5H9U9 1706 aaKnown RBP10.82□□□□□ -0.68
SMG6-201ENST00000263073 IGLV3-27P01718 113 aa10.82□□□□□ -0.68
SMG6-201ENST00000263073 PPICP45877 212 aa10.82□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms