RNA–Protein interactions for RNA: ENST00000261007.9

CHRNA1-201, Transcript of cholinergic receptor nicotinic alpha 1 subunit, humanhuman

TSL 2 BASIC

Gene CHRNA1, Length 1,980 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA1-201ENST00000261007 OR2S2Q9NQN1 319 aa9.57□□□□□ -0.88
CHRNA1-201ENST00000261007 OR5AC2Q9NZP5 309 aa9.57□□□□□ -0.88
CHRNA1-201ENST00000261007 FBLN5Q9UBX5 448 aa9.57□□□□□ -0.88
CHRNA1-201ENST00000261007 ANAPC10Q9UM13 185 aa9.57□□□□□ -0.88
CHRNA1-201ENST00000261007 STARD10Q9Y365 291 aa9.57□□□□□ -0.88
CHRNA1-201ENST00000261007 FLVCR1Q9Y5Y0 555 aa9.57□□□□□ -0.88
CHRNA1-201ENST00000261007 IGLV3-32A0A0A0MS00 114 aa9.56□□□□□ -0.88
CHRNA1-201ENST00000261007 TRBV11-1A0A0K0K1C0 115 aa9.56□□□□□ -0.88
CHRNA1-201ENST00000261007 C11orf98E9PRG8 122 aa9.56□□□□□ -0.88
CHRNA1-201ENST00000261007 SRSF10O75494 262 aaKnown RBP9.56□□□□□ -0.88
CHRNA1-201ENST00000261007 CER1O95813 267 aa9.56□□□□□ -0.88
CHRNA1-201ENST00000261007 BPNT1O95861 308 aa9.56□□□□□ -0.88
CHRNA1-201ENST00000261007 PLGP00747 810 aaPredicted RBP9.56□□□□□ -0.88
CHRNA1-201ENST00000261007 IFNA17P01571 189 aa9.56□□□□□ -0.88
CHRNA1-201ENST00000261007 FAM3AP98173 230 aa9.56□□□□□ -0.88
CHRNA1-201ENST00000261007 MFGE8Q08431 387 aaPredicted RBP9.56□□□□□ -0.88
CHRNA1-201ENST00000261007 RHEBQ15382 184 aa9.56□□□□□ -0.88
CHRNA1-201ENST00000261007 ACKR1Q16570 336 aa9.56□□□□□ -0.88
CHRNA1-201ENST00000261007 OR2B11Q5JQS5 317 aa9.56□□□□□ -0.88
CHRNA1-201ENST00000261007 VAX1Q5SQQ9 334 aa9.56□□□□□ -0.88
CHRNA1-201ENST00000261007 NSUN5P2Q63ZY6 315 aa9.56□□□□□ -0.88
CHRNA1-201ENST00000261007 POMZP3Q6PJE2 187 aa9.56□□□□□ -0.88
CHRNA1-201ENST00000261007 ARRDC1Q8N5I2 433 aa9.56□□□□□ -0.88
CHRNA1-201ENST00000261007 GVQW1Q8N7I0 195 aa9.56□□□□□ -0.88
CHRNA1-201ENST00000261007 OR13C3Q8NGS6 347 aa9.56□□□□□ -0.88
CHRNA1-201ENST00000261007 MARCH1Q8TCQ1 289 aa9.56□□□□□ -0.88
CHRNA1-201ENST00000261007 ZNF524Q96C55 264 aa9.56□□□□□ -0.88
CHRNA1-201ENST00000261007 MESP1Q9BRJ9 268 aa9.56□□□□□ -0.88
CHRNA1-201ENST00000261007 RGCCQ9H4X1 137 aa9.56□□□□□ -0.88
CHRNA1-201ENST00000261007 PPP4R1LQ9P1A2 415 aa9.56□□□□□ -0.88
CHRNA1-201ENST00000261007 COLQQ9Y215 455 aaPredicted RBP9.56□□□□□ -0.88
CHRNA1-201ENST00000261007 MEMO1Q9Y316 297 aa9.56□□□□□ -0.88
CHRNA1-201ENST00000261007 FER1L5A0AVI2 2057 aa9.56□□□□□ -0.88
CHRNA1-201ENST00000261007 ADAM10O14672 748 aa9.55□□□□□ -0.88
CHRNA1-201ENST00000261007 LAMTOR5O43504 91 aa9.55□□□□□ -0.88
CHRNA1-201ENST00000261007 JTBO76095 146 aa9.55□□□□□ -0.88
CHRNA1-201ENST00000261007 TDGF1P13385 188 aa9.55□□□□□ -0.88
CHRNA1-201ENST00000261007 NQO2P16083 231 aa9.55□□□□□ -0.88
CHRNA1-201ENST00000261007 NME2P22392 152 aa9.55□□□□□ -0.88
CHRNA1-201ENST00000261007 FKBP2P26885 142 aaKnown RBP9.55□□□□□ -0.88
CHRNA1-201ENST00000261007 HSD11B1P28845 292 aa9.55□□□□□ -0.88
CHRNA1-201ENST00000261007 QRFPP83859 136 aa9.55□□□□□ -0.88
CHRNA1-201ENST00000261007 AWAT1Q58HT5 328 aa9.55□□□□□ -0.88
CHRNA1-201ENST00000261007 SLC25A53Q5H9E4 307 aa9.55□□□□□ -0.88
CHRNA1-201ENST00000261007 RPL7L1Q6DKI1 246 aaKnown RBP9.55□□□□□ -0.88
CHRNA1-201ENST00000261007 SHISA6Q6ZSJ9 500 aa9.55□□□□□ -0.88
CHRNA1-201ENST00000261007 TMPPEQ6ZT21 453 aa9.55□□□□□ -0.88
CHRNA1-201ENST00000261007 HIST2H3AQ71DI3 136 aa9.55□□□□□ -0.88
CHRNA1-201ENST00000261007 POC1AQ8NBT0 407 aa9.55□□□□□ -0.88
CHRNA1-201ENST00000261007 CHST4Q8NCG5 386 aa9.55□□□□□ -0.88
CHRNA1-201ENST00000261007 OR4D6Q8NGJ1 314 aa9.55□□□□□ -0.88
CHRNA1-201ENST00000261007 OR51A2Q8NGJ7 313 aa9.55□□□□□ -0.88
CHRNA1-201ENST00000261007 OR4K15Q8NH41 348 aa9.55□□□□□ -0.88
CHRNA1-201ENST00000261007 PPP1R14AQ96A00 147 aa9.55□□□□□ -0.88
CHRNA1-201ENST00000261007 MRGPRX4Q96LA9 322 aa9.55□□□□□ -0.88
CHRNA1-201ENST00000261007 GGACTQ9BVM4 153 aa9.55□□□□□ -0.88
CHRNA1-201ENST00000261007 TOLLIPQ9H0E2 274 aa9.55□□□□□ -0.88
CHRNA1-201ENST00000261007 SERINC1Q9NRX5 453 aa9.55□□□□□ -0.88
CHRNA1-201ENST00000261007 R4GMQ9 66 aa9.55□□□□□ -0.88
CHRNA1-201ENST00000261007 IGHV3-20A0A0C4DH32 117 aa9.55□□□□□ -0.88
CHRNA1-201ENST00000261007 A6NLC8 198 aa9.55□□□□□ -0.88
CHRNA1-201ENST00000261007 FTCDNL1E5RQL4 147 aa9.55□□□□□ -0.88
CHRNA1-201ENST00000261007 GMFGO60234 142 aa9.55□□□□□ -0.88
CHRNA1-201ENST00000261007 GPANK1O95872 356 aa9.55□□□□□ -0.88
CHRNA1-201ENST00000261007 HLA-DQA2P01906 255 aa9.55□□□□□ -0.88
CHRNA1-201ENST00000261007 SERPINA5P05154 406 aa9.55□□□□□ -0.88
CHRNA1-201ENST00000261007 CHRM2P08172 466 aa9.55□□□□□ -0.88
CHRNA1-201ENST00000261007 HKR1P10072 659 aa9.55□□□□□ -0.88
CHRNA1-201ENST00000261007 ZNF41P51814 821 aaPredicted RBP9.55□□□□□ -0.88
CHRNA1-201ENST00000261007 GLO1Q04760 184 aa9.55□□□□□ -0.88
CHRNA1-201ENST00000261007 SPOCK1Q08629 439 aa9.55□□□□□ -0.88
CHRNA1-201ENST00000261007 HYAL4Q2M3T9 481 aa9.55□□□□□ -0.88
CHRNA1-201ENST00000261007 OPN5Q6U736 354 aa9.55□□□□□ -0.88
CHRNA1-201ENST00000261007 CLEC18BQ6UXF7 455 aa9.55□□□□□ -0.88
CHRNA1-201ENST00000261007 ETV3LQ6ZN32 361 aa9.55□□□□□ -0.88
CHRNA1-201ENST00000261007 Q6ZRG5 221 aa9.55□□□□□ -0.88
CHRNA1-201ENST00000261007 H1FNTQ75WM6 255 aaPredicted RBP9.55□□□□□ -0.88
CHRNA1-201ENST00000261007 PEG10Q86TG7 708 aaKnown RBP9.55□□□□□ -0.88
CHRNA1-201ENST00000261007 SLC38A9Q8NBW4 561 aa9.55□□□□□ -0.88
CHRNA1-201ENST00000261007 EXPH5Q8NEV8 1989 aa9.55□□□□□ -0.88
CHRNA1-201ENST00000261007 IFI44Q8TCB0 444 aa9.55□□□□□ -0.88
CHRNA1-201ENST00000261007 SECTM1Q8WVN6 248 aa9.55□□□□□ -0.88
CHRNA1-201ENST00000261007 TMEM230Q96A57 120 aa9.55□□□□□ -0.88
CHRNA1-201ENST00000261007 SPSB2Q99619 263 aa9.55□□□□□ -0.88
CHRNA1-201ENST00000261007 NKX3-1Q99801 234 aaPredicted RBP9.55□□□□□ -0.88
CHRNA1-201ENST00000261007 KLHDC3Q9BQ90 382 aa9.55□□□□□ -0.88
CHRNA1-201ENST00000261007 WDR77Q9BQA1 342 aaPredicted RBP9.55□□□□□ -0.88
CHRNA1-201ENST00000261007 ARID1BQ8NFD5 2236 aaPredicted RBP9.54□□□□□ -0.88
CHRNA1-201ENST00000261007 SEC16AO15027 2179 aa9.54□□□□□ -0.88
CHRNA1-201ENST00000261007 TRBV23-1A0A0A0MS06 115 aa9.54□□□□□ -0.88
CHRNA1-201ENST00000261007 IGLV1-36A0A0B4J1U3 117 aa9.54□□□□□ -0.88
CHRNA1-201ENST00000261007 A0A1W2PPH5 198 aa9.54□□□□□ -0.88
CHRNA1-201ENST00000261007 TIAF1O95411 115 aa9.54□□□□□ -0.88
CHRNA1-201ENST00000261007 SLC34A2O95436 690 aa9.54□□□□□ -0.88
CHRNA1-201ENST00000261007 CFIP05156 583 aa9.54□□□□□ -0.88
CHRNA1-201ENST00000261007 SNRNP70P08621 437 aaKnown RBP9.54□□□□□ -0.88
CHRNA1-201ENST00000261007 HOXB5P09067 269 aa9.54□□□□□ -0.88
CHRNA1-201ENST00000261007 GSTP1P09211 210 aaKnown RBP9.54□□□□□ -0.88
CHRNA1-201ENST00000261007 SPARCP09486 303 aa9.54□□□□□ -0.88
CHRNA1-201ENST00000261007 HOXA5P20719 270 aa9.54□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 48.4 ms