RNA–Protein interactions for RNA: ENST00000258781.10

CCM2-201, Transcript of CCM2 scaffold protein, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CCM2, Length 1,894 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-201ENST00000258781 WIPF3A6NGB9 483 aa24.02■■□□□ 1.44
CCM2-201ENST00000258781 TNK1Q13470 666 aa24.02■■□□□ 1.44
CCM2-201ENST00000258781 GSG1Q2KHT4 349 aa24.02■■□□□ 1.44
CCM2-201ENST00000258781 Q6ZTK2 550 aa24.02■■□□□ 1.44
CCM2-201ENST00000258781 TMEM229BQ8NBD8 167 aa24.02■■□□□ 1.44
CCM2-201ENST00000258781 OR10R2Q8NGX6 335 aa24.02■■□□□ 1.44
CCM2-201ENST00000258781 NPRL2Q8WTW4 380 aa24.02■■□□□ 1.44
CCM2-201ENST00000258781 RNF170Q96K19 258 aa24.02■■□□□ 1.44
CCM2-201ENST00000258781 TMEM59Q9BXS4 323 aa24.02■■□□□ 1.44
CCM2-201ENST00000258781 LOC100509620A0A075B734 347 aa24.01■■□□□ 1.43
CCM2-201ENST00000258781 TMEM235A6NFC5 223 aa24.01■■□□□ 1.43
CCM2-201ENST00000258781 A8MV72 311 aaPredicted RBP24.01■■□□□ 1.43
CCM2-201ENST00000258781 PEX14O75381 377 aa24.01■■□□□ 1.43
CCM2-201ENST00000258781 EDN3P14138 238 aa24.01■■□□□ 1.43
CCM2-201ENST00000258781 TAS2R19P59542 299 aa24.01■■□□□ 1.43
CCM2-201ENST00000258781 FAM3AP98173 230 aa24.01■■□□□ 1.43
CCM2-201ENST00000258781 CNN3Q15417 329 aaKnown RBP24.01■■□□□ 1.43
CCM2-201ENST00000258781 OR8B8Q15620 311 aa24.01■■□□□ 1.43
CCM2-201ENST00000258781 TMEM42Q69YG0 159 aa24.01■■□□□ 1.43
CCM2-201ENST00000258781 OR1K1Q8NGR3 316 aa24.01■■□□□ 1.43
CCM2-201ENST00000258781 CPNE2Q96FN4 548 aaPredicted RBP24.01■■□□□ 1.43
CCM2-201ENST00000258781 CST11Q9H112 138 aa24.01■■□□□ 1.43
CCM2-201ENST00000258781 MEIS3P1A6NDR6 274 aa24■■□□□ 1.43
CCM2-201ENST00000258781 MPIG6BO95866 241 aa24■■□□□ 1.43
CCM2-201ENST00000258781 CD79AP11912 226 aa24■■□□□ 1.43
CCM2-201ENST00000258781 PRKACBP22694 351 aa24■■□□□ 1.43
CCM2-201ENST00000258781 VEGFCP49767 419 aa24■■□□□ 1.43
CCM2-201ENST00000258781 ZNF92Q03936 586 aa24■■□□□ 1.43
CCM2-201ENST00000258781 CLVS2Q5SYC1 327 aa24■■□□□ 1.43
CCM2-201ENST00000258781 FAAP20Q6NZ36 180 aa24■■□□□ 1.43
CCM2-201ENST00000258781 RPUSD3Q6P087 351 aaKnown RBP24■■□□□ 1.43
CCM2-201ENST00000258781 TMEM104Q8NE00 496 aa24■■□□□ 1.43
CCM2-201ENST00000258781 GPR173Q9NS66 373 aa24■■□□□ 1.43
CCM2-201ENST00000258781 ZNF503-AS2A6NEH8 195 aa24■■□□□ 1.43
CCM2-201ENST00000258781 PRAF2O60831 178 aa24■■□□□ 1.43
CCM2-201ENST00000258781 NDUFB6O95139 128 aa24■■□□□ 1.43
CCM2-201ENST00000258781 IL18BPO95998 194 aa24■■□□□ 1.43
CCM2-201ENST00000258781 CDNFQ49AH0 187 aa24■■□□□ 1.43
CCM2-201ENST00000258781 ZBTB37Q5TC79 503 aa24■■□□□ 1.43
CCM2-201ENST00000258781 TCTE3Q8IZS6 198 aa24■■□□□ 1.43
CCM2-201ENST00000258781 GABRG1Q8N1C3 465 aa24■■□□□ 1.43
CCM2-201ENST00000258781 CHST4Q8NCG5 386 aa24■■□□□ 1.43
CCM2-201ENST00000258781 TNFAIP8L1Q8WVP5 186 aa24■■□□□ 1.43
CCM2-201ENST00000258781 PIGTQ969N2 578 aa24■■□□□ 1.43
CCM2-201ENST00000258781 URM1Q9BTM9 101 aaKnown RBP24■■□□□ 1.43
CCM2-201ENST00000258781 NOX3Q9HBY0 568 aa24■■□□□ 1.43
CCM2-201ENST00000258781 RANGRFQ9HD47 186 aaPredicted RBP24■■□□□ 1.43
CCM2-201ENST00000258781 STOMP27105 288 aa23.99■■□□□ 1.43
CCM2-201ENST00000258781 RAB1AP62820 205 aa23.99■■□□□ 1.43
CCM2-201ENST00000258781 ZFP69Q49AA0 526 aa23.99■■□□□ 1.43
CCM2-201ENST00000258781 STEAP1BQ6NZ63 245 aa23.99■■□□□ 1.43
CCM2-201ENST00000258781 GIMAP1Q8WWP7 306 aa23.99■■□□□ 1.43
CCM2-201ENST00000258781 BCL2L2Q92843 193 aaPredicted RBP23.99■■□□□ 1.43
CCM2-201ENST00000258781 CMBLQ96DG6 245 aa23.99■■□□□ 1.43
CCM2-201ENST00000258781 ZMAT3Q9HA38 289 aaKnown RBP23.99■■□□□ 1.43
CCM2-201ENST00000258781 NKIRAS2Q9NYR9 191 aa23.99■■□□□ 1.43
CCM2-201ENST00000258781 CRTAPO75718 401 aaPredicted RBP23.98■■□□□ 1.43
CCM2-201ENST00000258781 RCVRNP35243 200 aa23.98■■□□□ 1.43
CCM2-201ENST00000258781 CD83Q01151 205 aa23.98■■□□□ 1.43
CCM2-201ENST00000258781 PLP2Q04941 152 aa23.98■■□□□ 1.43
CCM2-201ENST00000258781 NANOS1Q8WY41 292 aaKnown RBP23.98■■□□□ 1.43
CCM2-201ENST00000258781 TRIB1Q96RU8 372 aa23.98■■□□□ 1.43
CCM2-201ENST00000258781 MED28Q9H204 178 aa23.98■■□□□ 1.43
CCM2-201ENST00000258781 OR51J1Q9H342 316 aa23.98■■□□□ 1.43
CCM2-201ENST00000258781 ITPR1Q14643 2758 aa23.98■■□□□ 1.43
CCM2-201ENST00000258781 GTF3C1Q12789 2109 aa23.98■■□□□ 1.43
CCM2-201ENST00000258781 A0A0A6YYD4 124 aa23.98■■□□□ 1.43
CCM2-201ENST00000258781 CD3DP04234 171 aa23.98■■□□□ 1.43
CCM2-201ENST00000258781 GUSBP1Q15486 140 aa23.98■■□□□ 1.43
CCM2-201ENST00000258781 SLC22A6Q4U2R8 563 aa23.98■■□□□ 1.43
CCM2-201ENST00000258781 ZNF782Q6ZMW2 699 aaPredicted RBP23.98■■□□□ 1.43
CCM2-201ENST00000258781 Q8NA96 180 aa23.98■■□□□ 1.43
CCM2-201ENST00000258781 OR56B1Q8NGI3 324 aa23.98■■□□□ 1.43
CCM2-201ENST00000258781 TECTBQ96PL2 329 aa23.98■■□□□ 1.43
CCM2-201ENST00000258781 NICN1Q9BSH3 213 aa23.98■■□□□ 1.43
CCM2-201ENST00000258781 MOV10Q9HCE1 1003 aaKnown RBP23.98■■□□□ 1.43
CCM2-201ENST00000258781 ING3Q9NXR8 418 aa23.98■■□□□ 1.43
CCM2-201ENST00000258781 ELF5Q9UKW6 265 aaPredicted RBP23.98■■□□□ 1.43
CCM2-201ENST00000258781 ING4Q9UNL4 249 aa23.98■■□□□ 1.43
CCM2-201ENST00000258781 ICMTO60725 284 aa23.97■■□□□ 1.43
CCM2-201ENST00000258781 CYB5AP00167 134 aa23.97■■□□□ 1.43
CCM2-201ENST00000258781 GSTP1P09211 210 aaKnown RBP23.97■■□□□ 1.43
CCM2-201ENST00000258781 RPS27AP62979 156 aaKnown RBP23.97■■□□□ 1.43
CCM2-201ENST00000258781 RBMS2Q15434 407 aaKnown RBP23.97■■□□□ 1.43
CCM2-201ENST00000258781 DMRTC1Q5HYR2 192 aa23.97■■□□□ 1.43
CCM2-201ENST00000258781 FJX1Q86VR8 437 aa23.97■■□□□ 1.43
CCM2-201ENST00000258781 OR5D18Q8NGL1 313 aa23.97■■□□□ 1.43
CCM2-201ENST00000258781 S100A13Q99584 98 aa23.97■■□□□ 1.43
CCM2-201ENST00000258781 OR10A4Q9H209 315 aa23.97■■□□□ 1.43
CCM2-201ENST00000258781 BANF2Q9H503 90 aa23.97■■□□□ 1.43
CCM2-201ENST00000258781 FLVCR2Q9UPI3 526 aa23.97■■□□□ 1.43
CCM2-201ENST00000258781 C5orf49A4QMS7 147 aa23.96■■□□□ 1.43
CCM2-201ENST00000258781 NRASP01111 189 aa23.96■■□□□ 1.43
CCM2-201ENST00000258781 MECP2P51608 486 aaKnown RBP23.96■■□□□ 1.43
CCM2-201ENST00000258781 CD276Q5ZPR3 534 aa23.96■■□□□ 1.43
CCM2-201ENST00000258781 TFAP2EQ6VUC0 442 aa23.96■■□□□ 1.43
CCM2-201ENST00000258781 LHFPL2Q6ZUX7 228 aa23.96■■□□□ 1.43
CCM2-201ENST00000258781 FAM89BQ8N5H3 189 aa23.96■■□□□ 1.43
CCM2-201ENST00000258781 APOBEC3DQ96AK3 386 aaPredicted RBP23.96■■□□□ 1.43
CCM2-201ENST00000258781 POM121L2Q96KW2 1035 aa23.96■■□□□ 1.43
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms