RNA–Protein interactions for RNA: ENST00000258733.8

GPNMB-201, Transcript of glycoprotein nmb, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene GPNMB, Length 2,862 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPNMB-201ENST00000258733 SLC35A1P78382 337 aa6.86□□□□□ -1.31
GPNMB-201ENST00000258733 DGCR2P98153 550 aa6.86□□□□□ -1.31
GPNMB-201ENST00000258733 FUT7Q11130 342 aa6.86□□□□□ -1.31
GPNMB-201ENST00000258733 IL10RAQ13651 578 aa6.86□□□□□ -1.31
GPNMB-201ENST00000258733 DUSP5Q16690 384 aa6.86□□□□□ -1.31
GPNMB-201ENST00000258733 PLK5Q496M5 336 aa6.86□□□□□ -1.31
GPNMB-201ENST00000258733 TMEM41BQ5BJD5 291 aa6.86□□□□□ -1.31
GPNMB-201ENST00000258733 SOHLH1Q5JUK2 328 aa6.86□□□□□ -1.31
GPNMB-201ENST00000258733 FAM182BQ5T319 152 aa6.86□□□□□ -1.31
GPNMB-201ENST00000258733 FAHD1Q6P587 224 aa6.86□□□□□ -1.31
GPNMB-201ENST00000258733 NEGR1Q7Z3B1 354 aa6.86□□□□□ -1.31
GPNMB-201ENST00000258733 TMPRSS12Q86WS5 348 aa6.86□□□□□ -1.31
GPNMB-201ENST00000258733 GATSQ8NAP1 163 aa6.86□□□□□ -1.31
GPNMB-201ENST00000258733 OR4D11Q8NGI4 311 aa6.86□□□□□ -1.31
GPNMB-201ENST00000258733 OR5D13Q8NGL4 314 aa6.86□□□□□ -1.31
GPNMB-201ENST00000258733 NEIL3Q8TAT5 605 aa6.86□□□□□ -1.31
GPNMB-201ENST00000258733 ABHD4Q8TB40 342 aa6.86□□□□□ -1.31
GPNMB-201ENST00000258733 ZNF480Q8WV37 535 aa6.86□□□□□ -1.31
GPNMB-201ENST00000258733 RXFP2Q8WXD0 754 aa6.86□□□□□ -1.31
GPNMB-201ENST00000258733 DNAJC19Q96DA6 116 aa6.86□□□□□ -1.31
GPNMB-201ENST00000258733 CXorf40BQ96DE9 158 aa6.86□□□□□ -1.31
GPNMB-201ENST00000258733 RSPRY1Q96DX4 576 aa6.86□□□□□ -1.31
GPNMB-201ENST00000258733 SIGLEC12Q96PQ1 595 aa6.86□□□□□ -1.31
GPNMB-201ENST00000258733 HIST1H2AAQ96QV6 131 aa6.86□□□□□ -1.31
GPNMB-201ENST00000258733 ARHGAP9Q9BRR9 750 aa6.86□□□□□ -1.31
GPNMB-201ENST00000258733 FAIM2Q9BWQ8 316 aa6.86□□□□□ -1.31
GPNMB-201ENST00000258733 ZBTB3Q9H5J0 574 aa6.86□□□□□ -1.31
GPNMB-201ENST00000258733 GREM2Q9H772 168 aa6.86□□□□□ -1.31
GPNMB-201ENST00000258733 CDC42EP3Q9UKI2 254 aa6.86□□□□□ -1.31
GPNMB-201ENST00000258733 F8VVB4 439 aa6.86□□□□□ -1.31
GPNMB-201ENST00000258733 F8VWA3 439 aa6.86□□□□□ -1.31
GPNMB-201ENST00000258733 CLDN1O95832 211 aa6.86□□□□□ -1.31
GPNMB-201ENST00000258733 PTPN7P35236 360 aa6.86□□□□□ -1.31
GPNMB-201ENST00000258733 GLRBP48167 497 aa6.86□□□□□ -1.31
GPNMB-201ENST00000258733 MVDP53602 400 aa6.86□□□□□ -1.31
GPNMB-201ENST00000258733 SMAD3P84022 425 aaKnown RBP6.86□□□□□ -1.31
GPNMB-201ENST00000258733 OR1Q1Q15612 314 aa6.86□□□□□ -1.31
GPNMB-201ENST00000258733 KIAA1644Q3SXP7 199 aa6.86□□□□□ -1.31
GPNMB-201ENST00000258733 ATP6AP1LQ52LC2 224 aa6.86□□□□□ -1.31
GPNMB-201ENST00000258733 LRRC10Q5BKY1 277 aa6.86□□□□□ -1.31
GPNMB-201ENST00000258733 PAGE3Q5JUK9 113 aa6.86□□□□□ -1.31
GPNMB-201ENST00000258733 ACSM6Q6P461 480 aa6.86□□□□□ -1.31
GPNMB-201ENST00000258733 NCEH1Q6PIU2 408 aa6.86□□□□□ -1.31
GPNMB-201ENST00000258733 APOOLQ6UXV4 268 aa6.86□□□□□ -1.31
GPNMB-201ENST00000258733 Q6ZNB5 142 aa6.86□□□□□ -1.31
GPNMB-201ENST00000258733 TSEN54Q7Z6J9 526 aaKnown RBP6.86□□□□□ -1.31
GPNMB-201ENST00000258733 C17orf64Q86WR6 236 aa6.86□□□□□ -1.31
GPNMB-201ENST00000258733 BCORP1Q8N888 145 aa6.86□□□□□ -1.31
GPNMB-201ENST00000258733 CDRT4Q8N9R6 151 aa6.86□□□□□ -1.31
GPNMB-201ENST00000258733 OR5A2Q8NGI9 324 aa6.86□□□□□ -1.31
GPNMB-201ENST00000258733 OR4X1Q8NH49 305 aa6.86□□□□□ -1.31
GPNMB-201ENST00000258733 ACY3Q96HD9 319 aa6.86□□□□□ -1.31
GPNMB-201ENST00000258733 GPR82Q96P67 336 aa6.86□□□□□ -1.31
GPNMB-201ENST00000258733 MACROD1Q9BQ69 325 aa6.86□□□□□ -1.31
GPNMB-201ENST00000258733 NDFIP1Q9BT67 221 aa6.86□□□□□ -1.31
GPNMB-201ENST00000258733 SLC52A3Q9NQ40 469 aa6.86□□□□□ -1.31
GPNMB-201ENST00000258733 ASB6Q9NWX5 421 aa6.86□□□□□ -1.31
GPNMB-201ENST00000258733 GREB1LQ9C091 1923 aaPredicted RBP6.86□□□□□ -1.31
GPNMB-201ENST00000258733 BAZ2BQ9UIF8 2168 aaKnown RBP6.85□□□□□ -1.31
GPNMB-201ENST00000258733 A0A1W2PR80 420 aa6.85□□□□□ -1.31
GPNMB-201ENST00000258733 NAP1L6A6NFF2 107 aa6.85□□□□□ -1.31
GPNMB-201ENST00000258733 HIDE1A8MVS5 230 aa6.85□□□□□ -1.31
GPNMB-201ENST00000258733 SAP18O00422 153 aaKnown RBP6.85□□□□□ -1.31
GPNMB-201ENST00000258733 EEDO75530 441 aaKnown RBP6.85□□□□□ -1.31
GPNMB-201ENST00000258733 ZIC2O95409 532 aaPredicted RBP6.85□□□□□ -1.31
GPNMB-201ENST00000258733 SOD1P00441 154 aa6.85□□□□□ -1.31
GPNMB-201ENST00000258733 C1RP00736 705 aa6.85□□□□□ -1.31
GPNMB-201ENST00000258733 FGF9P31371 208 aaPredicted RBP6.85□□□□□ -1.31
GPNMB-201ENST00000258733 GABRA5P31644 462 aa6.85□□□□□ -1.31
GPNMB-201ENST00000258733 ERVK11-1P61568 191 aa6.85□□□□□ -1.31
GPNMB-201ENST00000258733 RUNX1Q01196 453 aa6.85□□□□□ -1.31
GPNMB-201ENST00000258733 OR7A5Q15622 319 aa6.85□□□□□ -1.31
GPNMB-201ENST00000258733 FCRL6Q6DN72 434 aa6.85□□□□□ -1.31
GPNMB-201ENST00000258733 OR2T5Q6IEZ7 315 aa6.85□□□□□ -1.31
GPNMB-201ENST00000258733 BTNL8Q6UX41 500 aa6.85□□□□□ -1.31
GPNMB-201ENST00000258733 LRRC69Q6ZNQ3 347 aa6.85□□□□□ -1.31
GPNMB-201ENST00000258733 GPRIN1Q7Z2K8 1008 aa6.85□□□□□ -1.31
GPNMB-201ENST00000258733 TMEM116Q8NCL8 245 aa6.85□□□□□ -1.31
GPNMB-201ENST00000258733 OR2T29Q8NH02 315 aa6.85□□□□□ -1.31
GPNMB-201ENST00000258733 SLC25A43Q8WUT9 341 aaPredicted RBP6.85□□□□□ -1.31
GPNMB-201ENST00000258733 MS4A10Q96PG2 267 aa6.85□□□□□ -1.31
GPNMB-201ENST00000258733 MCRIP2Q9BUT9 160 aaKnown RBP6.85□□□□□ -1.31
GPNMB-201ENST00000258733 SMIM3Q9BZL3 60 aa6.85□□□□□ -1.31
GPNMB-201ENST00000258733 CDH20Q9HBT6 801 aa6.85□□□□□ -1.31
GPNMB-201ENST00000258733 KCNJ16Q9NPI9 418 aa6.85□□□□□ -1.31
GPNMB-201ENST00000258733 INPP5EQ9NRR6 644 aa6.85□□□□□ -1.31
GPNMB-201ENST00000258733 PIGVQ9NUD9 493 aa6.85□□□□□ -1.31
GPNMB-201ENST00000258733 SLAMF8Q9P0V8 285 aa6.85□□□□□ -1.31
GPNMB-201ENST00000258733 FBLN5Q9UBX5 448 aa6.85□□□□□ -1.31
GPNMB-201ENST00000258733 TRAPPC2LQ9UL33 140 aa6.85□□□□□ -1.31
GPNMB-201ENST00000258733 DAPP1Q9UN19 280 aa6.85□□□□□ -1.31
GPNMB-201ENST00000258733 COQ4Q9Y3A0 265 aa6.85□□□□□ -1.31
GPNMB-201ENST00000258733 LRRC37AA6NMS7 1700 aa6.85□□□□□ -1.31
GPNMB-201ENST00000258733 FRMPD3Q5JV73 1810 aa6.85□□□□□ -1.31
GPNMB-201ENST00000258733 LOC100509620A0A075B734 347 aa6.85□□□□□ -1.31
GPNMB-201ENST00000258733 IFITM5A6NNB3 132 aa6.85□□□□□ -1.31
GPNMB-201ENST00000258733 B4DEV8 164 aa6.85□□□□□ -1.31
GPNMB-201ENST00000258733 J3KR12 359 aa6.85□□□□□ -1.31
GPNMB-201ENST00000258733 IGLC1P0CG04 106 aa6.85□□□□□ -1.31
GPNMB-201ENST00000258733 SLC25A4P12235 298 aa6.85□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms