RNA–Protein interactions for RNA: ENST00000254667.7

PTPRE-201, Transcript of protein tyrosine phosphatase, receptor type E, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTPRE, Length 5,331 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRE-201ENST00000254667 TMEM41BQ5BJD5 291 aa16.96■□□□□ 0.31
PTPRE-201ENST00000254667 FAM27D1Q5T7N8 215 aa16.96■□□□□ 0.31
PTPRE-201ENST00000254667 ADPRHL1Q8NDY3 354 aa16.96■□□□□ 0.31
PTPRE-201ENST00000254667 PCNPQ8WW12 178 aaKnown RBP16.96■□□□□ 0.31
PTPRE-201ENST00000254667 ZG16BQ96DA0 208 aa16.96■□□□□ 0.31
PTPRE-201ENST00000254667 OCIAD1Q9NX40 245 aa16.96■□□□□ 0.31
PTPRE-201ENST00000254667 AQP7P3A6NL99 342 aa16.96■□□□□ 0.31
PTPRE-201ENST00000254667 C21orf140B9A014 251 aa16.96■□□□□ 0.31
PTPRE-201ENST00000254667 TMEM128Q5BJH2 165 aa16.96■□□□□ 0.31
PTPRE-201ENST00000254667 SPATA46Q5T0L3 261 aa16.96■□□□□ 0.31
PTPRE-201ENST00000254667 ORAI1Q96D31 301 aa16.96■□□□□ 0.31
PTPRE-201ENST00000254667 TRAPPC4Q9Y296 219 aa16.96■□□□□ 0.31
PTPRE-201ENST00000254667 BPIFB3P59826 476 aa16.96■□□□□ 0.31
PTPRE-201ENST00000254667 SFTPA1Q8IWL2 248 aa16.96■□□□□ 0.31
PTPRE-201ENST00000254667 CT55Q8WUE5 264 aa16.96■□□□□ 0.31
PTPRE-201ENST00000254667 OR13G1Q8NGZ3 307 aa16.95■□□□□ 0.3
PTPRE-201ENST00000254667 HES7Q9BYE0 225 aa16.95■□□□□ 0.3
PTPRE-201ENST00000254667 MED9Q9NWA0 146 aa16.95■□□□□ 0.3
PTPRE-201ENST00000254667 IL5P05113 134 aa16.95■□□□□ 0.3
PTPRE-201ENST00000254667 HOXD11P31277 338 aaPredicted RBP16.95■□□□□ 0.3
PTPRE-201ENST00000254667 AVPI1Q5T686 147 aa16.95■□□□□ 0.3
PTPRE-201ENST00000254667 FAM58AQ8N1B3 248 aa16.95■□□□□ 0.3
PTPRE-201ENST00000254667 APH1BQ8WW43 257 aa16.95■□□□□ 0.3
PTPRE-201ENST00000254667 MYOZ1Q9NP98 299 aaPredicted RBP16.95■□□□□ 0.3
PTPRE-201ENST00000254667 FLVCR2Q9UPI3 526 aa16.95■□□□□ 0.3
PTPRE-201ENST00000254667 FAM96BQ9Y3D0 163 aa16.95■□□□□ 0.3
PTPRE-201ENST00000254667 PI3P19957 117 aa16.95■□□□□ 0.3
PTPRE-201ENST00000254667 OR6X1Q8NH79 312 aa16.95■□□□□ 0.3
PTPRE-201ENST00000254667 BSCL2Q96G97 398 aaPredicted RBP16.95■□□□□ 0.3
PTPRE-201ENST00000254667 FBXO34Q9NWN3 711 aa16.95■□□□□ 0.3
PTPRE-201ENST00000254667 TNKS1BP1Q9C0C2 1729 aaKnown RBP16.95■□□□□ 0.3
PTPRE-201ENST00000254667 ZNF724A8MTY0 619 aa16.95■□□□□ 0.3
PTPRE-201ENST00000254667 RAC3P60763 192 aa16.95■□□□□ 0.3
PTPRE-201ENST00000254667 RPL11P62913 178 aaKnown RBP16.95■□□□□ 0.3
PTPRE-201ENST00000254667 TRAT1Q6PIZ9 186 aa16.95■□□□□ 0.3
PTPRE-201ENST00000254667 NPEPL1Q8NDH3 523 aa16.95■□□□□ 0.3
PTPRE-201ENST00000254667 PSENENQ9NZ42 101 aa16.95■□□□□ 0.3
PTPRE-201ENST00000254667 OR4S1Q8NGB4 309 aa16.94■□□□□ 0.3
PTPRE-201ENST00000254667 SF3B5Q9BWJ5 86 aaKnown RBP16.94■□□□□ 0.3
PTPRE-201ENST00000254667 GNG13Q9P2W3 67 aa16.94■□□□□ 0.3
PTPRE-201ENST00000254667 CRYM-AS1A6NIL9 109 aa16.94■□□□□ 0.3
PTPRE-201ENST00000254667 RER1O15258 196 aa16.94■□□□□ 0.3
PTPRE-201ENST00000254667 MOSPD3O75425 235 aa16.94■□□□□ 0.3
PTPRE-201ENST00000254667 UBE2IP63279 158 aaKnown RBP16.94■□□□□ 0.3
PTPRE-201ENST00000254667 FLI1Q01543 452 aaPredicted RBP16.94■□□□□ 0.3
PTPRE-201ENST00000254667 KISS1Q15726 138 aa16.94■□□□□ 0.3
PTPRE-201ENST00000254667 VSTM2LQ96N03 204 aa16.94■□□□□ 0.3
PTPRE-201ENST00000254667 TCFL5Q9UL49 500 aa16.94■□□□□ 0.3
PTPRE-201ENST00000254667 SPRY3O43610 288 aa16.94■□□□□ 0.3
PTPRE-201ENST00000254667 ANGPTL7O43827 346 aa16.94■□□□□ 0.3
PTPRE-201ENST00000254667 CT45A10P0DMU9 189 aa16.94■□□□□ 0.3
PTPRE-201ENST00000254667 ZNF32P17041 273 aa16.94■□□□□ 0.3
PTPRE-201ENST00000254667 COX5AP20674 150 aa16.94■□□□□ 0.3
PTPRE-201ENST00000254667 PXDC1Q5TGL8 231 aa16.94■□□□□ 0.3
PTPRE-201ENST00000254667 CDH26Q8IXH8 852 aa16.94■□□□□ 0.3
PTPRE-201ENST00000254667 FBXO17Q96EF6 278 aa16.94■□□□□ 0.3
PTPRE-201ENST00000254667 KLK11Q9UBX7 282 aa16.94■□□□□ 0.3
PTPRE-201ENST00000254667 LIMS3P0CW19 117 aa16.94■□□□□ 0.3
PTPRE-201ENST00000254667 LIMS4P0CW20 117 aa16.94■□□□□ 0.3
PTPRE-201ENST00000254667 CD82P27701 267 aa16.94■□□□□ 0.3
PTPRE-201ENST00000254667 FOXB2Q5VYV0 432 aa16.94■□□□□ 0.3
PTPRE-201ENST00000254667 MAMSTRQ6ZN01 415 aa16.94■□□□□ 0.3
PTPRE-201ENST00000254667 GINS3Q9BRX5 216 aa16.94■□□□□ 0.3
PTPRE-201ENST00000254667 TRAF3IP2O43734 574 aaPredicted RBP16.94■□□□□ 0.3
PTPRE-201ENST00000254667 AQP8O94778 261 aa16.94■□□□□ 0.3
PTPRE-201ENST00000254667 METTL15P1P0C7V9 234 aa16.94■□□□□ 0.3
PTPRE-201ENST00000254667 MDH2P40926 338 aaKnown RBP16.94■□□□□ 0.3
PTPRE-201ENST00000254667 UBE2MP61081 183 aaKnown RBP16.94■□□□□ 0.3
PTPRE-201ENST00000254667 BAMBIQ13145 260 aa16.94■□□□□ 0.3
PTPRE-201ENST00000254667 PABPC1L2AQ5JQF8 200 aa16.94■□□□□ 0.3
PTPRE-201ENST00000254667 TOR2AQ5JU69 321 aa16.94■□□□□ 0.3
PTPRE-201ENST00000254667 ZDHHC22Q8N966 263 aa16.94■□□□□ 0.3
PTPRE-201ENST00000254667 SOX7Q9BT81 388 aa16.94■□□□□ 0.3
PTPRE-201ENST00000254667 AQP7O14520 342 aa16.93■□□□□ 0.3
PTPRE-201ENST00000254667 YIF1AO95070 293 aa16.93■□□□□ 0.3
PTPRE-201ENST00000254667 ZFPL1O95159 310 aa16.93■□□□□ 0.3
PTPRE-201ENST00000254667 FPR2P25090 351 aa16.93■□□□□ 0.3
PTPRE-201ENST00000254667 BAK1Q16611 211 aa16.93■□□□□ 0.3
PTPRE-201ENST00000254667 MICBQ29980 383 aa16.93■□□□□ 0.3
PTPRE-201ENST00000254667 OR2Z1Q8NG97 314 aa16.93■□□□□ 0.3
PTPRE-201ENST00000254667 SARGQ9BW04 601 aa16.93■□□□□ 0.3
PTPRE-201ENST00000254667 TUBG2Q9NRH3 451 aa16.93■□□□□ 0.3
PTPRE-201ENST00000254667 TXNL1O43396 289 aa16.93■□□□□ 0.3
PTPRE-201ENST00000254667 GP1BAP07359 652 aa16.93■□□□□ 0.3
PTPRE-201ENST00000254667 GABRA1P14867 456 aa16.93■□□□□ 0.3
PTPRE-201ENST00000254667 CDKN2AP42771 156 aaKnown RBP16.93■□□□□ 0.3
PTPRE-201ENST00000254667 SLC39A7Q92504 469 aa16.93■□□□□ 0.3
PTPRE-201ENST00000254667 TIAL1Q01085 375 aaKnown RBP eCLIP16.93■□□□□ 0.3
PTPRE-201ENST00000254667 CDONQ4KMG0 1287 aa16.93■□□□□ 0.3
PTPRE-201ENST00000254667 RASL10BQ96S79 203 aa16.93■□□□□ 0.3
PTPRE-201ENST00000254667 GPR37O15354 613 aa16.93■□□□□ 0.3
PTPRE-201ENST00000254667 LY86O95711 162 aa16.93■□□□□ 0.3
PTPRE-201ENST00000254667 TFF2Q03403 129 aa16.93■□□□□ 0.3
PTPRE-201ENST00000254667 CBLN3Q6UW01 205 aa16.93■□□□□ 0.3
PTPRE-201ENST00000254667 C17orf78Q8N4C9 275 aa16.93■□□□□ 0.3
PTPRE-201ENST00000254667 WDFY2Q96P53 400 aa16.93■□□□□ 0.3
PTPRE-201ENST00000254667 ADAM19Q9H013 955 aa16.93■□□□□ 0.3
PTPRE-201ENST00000254667 PATZ1Q9HBE1 687 aaKnown RBP16.93■□□□□ 0.3
PTPRE-201ENST00000254667 MTCH1Q9NZJ7 389 aa16.93■□□□□ 0.3
PTPRE-201ENST00000254667 OR13C7P0DN81 318 aa16.92■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 58.3 ms