RNA–Protein interactions for RNA: ENST00000228251.8

YBX3-201, Transcript of Y-box binding protein 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene YBX3, Length 1,796 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-201ENST00000228251 OCSTAMPQ9BR26 566 aa16.69■□□□□ 0.26
YBX3-201ENST00000228251 SLC6A15Q9H2J7 730 aa16.69■□□□□ 0.26
YBX3-201ENST00000228251 EIF3KQ9UBQ5 218 aaKnown RBP16.69■□□□□ 0.26
YBX3-201ENST00000228251 CACNA1HO95180 2353 aa16.69■□□□□ 0.26
YBX3-201ENST00000228251 ZNF407Q9C0G0 2248 aa16.69■□□□□ 0.26
YBX3-201ENST00000228251 ANKRD34BA5PLL1 514 aa16.69■□□□□ 0.26
YBX3-201ENST00000228251 NME2P1O60361 137 aa16.69■□□□□ 0.26
YBX3-201ENST00000228251 NME2P22392 152 aa16.69■□□□□ 0.26
YBX3-201ENST00000228251 NKPD1Q17RQ9 610 aa16.69■□□□□ 0.26
YBX3-201ENST00000228251 LY6G6FQ5SQ64 297 aa16.69■□□□□ 0.26
YBX3-201ENST00000228251 DCAF12L2Q5VW00 463 aa16.69■□□□□ 0.26
YBX3-201ENST00000228251 LINC00696Q6ZRV3 163 aa16.69■□□□□ 0.26
YBX3-201ENST00000228251 ZC3HAV1Q7Z2W4 902 aaKnown RBP16.69■□□□□ 0.26
YBX3-201ENST00000228251 ZDHHC22Q8N966 263 aa16.69■□□□□ 0.26
YBX3-201ENST00000228251 PNLDC1Q8NA58 520 aaKnown RBP16.69■□□□□ 0.26
YBX3-201ENST00000228251 SEMA6DQ8NFY4 1073 aa16.69■□□□□ 0.26
YBX3-201ENST00000228251 OR2AE1Q8NHA4 323 aa16.69■□□□□ 0.26
YBX3-201ENST00000228251 ASB13Q8WXK3 278 aa16.69■□□□□ 0.26
YBX3-201ENST00000228251 URM1Q9BTM9 101 aaKnown RBP16.69■□□□□ 0.26
YBX3-201ENST00000228251 CST11Q9H112 138 aa16.69■□□□□ 0.26
YBX3-201ENST00000228251 RNF122Q9H9V4 155 aa16.69■□□□□ 0.26
YBX3-201ENST00000228251 ARHGAP21Q5T5U3 1957 aa16.68■□□□□ 0.26
YBX3-201ENST00000228251 RPL36A-HNRNPH2H7BZ11 118 aa16.68■□□□□ 0.26
YBX3-201ENST00000228251 CRTAPO75718 401 aaPredicted RBP16.68■□□□□ 0.26
YBX3-201ENST00000228251 RGS11O94810 467 aa16.68■□□□□ 0.26
YBX3-201ENST00000228251 HRH1P35367 487 aa16.68■□□□□ 0.26
YBX3-201ENST00000228251 ZNF81P51508 661 aa16.68■□□□□ 0.26
YBX3-201ENST00000228251 PCBD1P61457 104 aa16.68■□□□□ 0.26
YBX3-201ENST00000228251 TSPAN5P62079 268 aa16.68■□□□□ 0.26
YBX3-201ENST00000228251 CXADRP78310 365 aa16.68■□□□□ 0.26
YBX3-201ENST00000228251 SPEM2Q0P670 501 aa16.68■□□□□ 0.26
YBX3-201ENST00000228251 C4orf46Q504U0 113 aa16.68■□□□□ 0.26
YBX3-201ENST00000228251 SLC25A42Q86VD7 318 aa16.68■□□□□ 0.26
YBX3-201ENST00000228251 ZNF100Q8IYN0 542 aa16.68■□□□□ 0.26
YBX3-201ENST00000228251 ZNF680Q8NEM1 530 aa16.68■□□□□ 0.26
YBX3-201ENST00000228251 NPRL2Q8WTW4 380 aa16.68■□□□□ 0.26
YBX3-201ENST00000228251 REEP6Q96HR9 211 aa16.68■□□□□ 0.26
YBX3-201ENST00000228251 ARHGAP5-AS1Q96IT6 56 aa16.68■□□□□ 0.26
YBX3-201ENST00000228251 FER1L6-AS2Q96M78 137 aa16.68■□□□□ 0.26
YBX3-201ENST00000228251 FN3KRPQ9HA64 309 aa16.68■□□□□ 0.26
YBX3-201ENST00000228251 ZNF318Q5VUA4 2279 aa16.68■□□□□ 0.26
YBX3-201ENST00000228251 OR2AT4A6NND4 320 aa16.67■□□□□ 0.26
YBX3-201ENST00000228251 FAM166BA8MTA8 275 aa16.67■□□□□ 0.26
YBX3-201ENST00000228251 SIX6O95475 246 aa16.67■□□□□ 0.26
YBX3-201ENST00000228251 IL2RAP01589 272 aa16.67■□□□□ 0.26
YBX3-201ENST00000228251 SP1P08047 785 aa16.67■□□□□ 0.26
YBX3-201ENST00000228251 FCGR2AP12318 317 aa16.67■□□□□ 0.26
YBX3-201ENST00000228251 MGMTP16455 207 aa16.67■□□□□ 0.26
YBX3-201ENST00000228251 CXCL2P19875 107 aa16.67■□□□□ 0.26
YBX3-201ENST00000228251 HTR5AP47898 357 aa16.67■□□□□ 0.26
YBX3-201ENST00000228251 GNG2P59768 71 aa16.67■□□□□ 0.26
YBX3-201ENST00000228251 SRSF4Q08170 494 aaKnown RBP16.67■□□□□ 0.26
YBX3-201ENST00000228251 TRIP6Q15654 476 aaKnown RBP16.67■□□□□ 0.26
YBX3-201ENST00000228251 VAX1Q5SQQ9 334 aa16.67■□□□□ 0.26
YBX3-201ENST00000228251 CD163Q86VB7 1156 aa16.67■□□□□ 0.26
YBX3-201ENST00000228251 OR5D18Q8NGL1 313 aa16.67■□□□□ 0.26
YBX3-201ENST00000228251 TNFAIP8L1Q8WVP5 186 aa16.67■□□□□ 0.26
YBX3-201ENST00000228251 ST8SIA4Q92187 359 aa16.67■□□□□ 0.26
YBX3-201ENST00000228251 SPSB1Q96BD6 273 aa16.67■□□□□ 0.26
YBX3-201ENST00000228251 IFT46Q9NQC8 304 aa16.67■□□□□ 0.26
YBX3-201ENST00000228251 B3GNT2Q9NY97 397 aa16.67■□□□□ 0.26
YBX3-201ENST00000228251 ATPIF1Q9UII2 106 aa16.67■□□□□ 0.26
YBX3-201ENST00000228251 ZNF391Q9UJN7 358 aa16.67■□□□□ 0.26
YBX3-201ENST00000228251 PLEKHA6Q9Y2H5 1048 aa16.67■□□□□ 0.26
YBX3-201ENST00000228251 OTOGLQ3ZCN5 2332 aa16.67■□□□□ 0.26
YBX3-201ENST00000228251 CEACAM18A8MTB9 384 aa16.66■□□□□ 0.26
YBX3-201ENST00000228251 ZNF35P13682 527 aa16.66■□□□□ 0.26
YBX3-201ENST00000228251 ZBTB25P24278 435 aa16.66■□□□□ 0.26
YBX3-201ENST00000228251 SSTR2P30874 369 aa16.66■□□□□ 0.26
YBX3-201ENST00000228251 DHRS2Q13268 280 aa16.66■□□□□ 0.26
YBX3-201ENST00000228251 SCGB2B2Q4G0G5 96 aa16.66■□□□□ 0.26
YBX3-201ENST00000228251 C12orf45Q8N5I9 185 aaPredicted RBP16.66■□□□□ 0.26
YBX3-201ENST00000228251 OR8H1Q8NGG4 311 aa16.66■□□□□ 0.26
YBX3-201ENST00000228251 PIGTQ969N2 578 aa16.66■□□□□ 0.26
YBX3-201ENST00000228251 BCO1Q9HAY6 547 aa16.66■□□□□ 0.26
YBX3-201ENST00000228251 SLC7A10Q9NS82 523 aa16.66■□□□□ 0.26
YBX3-201ENST00000228251 NOSIPQ9Y314 301 aaKnown RBP16.66■□□□□ 0.26
YBX3-201ENST00000228251 DNAJC13O75165 2243 aa16.66■□□□□ 0.26
YBX3-201ENST00000228251 hCG_38984A0A1B0GV85 526 aa16.66■□□□□ 0.26
YBX3-201ENST00000228251 OR6C65A6NJZ3 312 aa16.66■□□□□ 0.26
YBX3-201ENST00000228251 HMSDA8MTL9 139 aa16.66■□□□□ 0.26
YBX3-201ENST00000228251 F5H5P2 479 aa16.66■□□□□ 0.26
YBX3-201ENST00000228251 GOSR2O14653 212 aa16.66■□□□□ 0.26
YBX3-201ENST00000228251 TSC22D2O75157 780 aa16.66■□□□□ 0.26
YBX3-201ENST00000228251 CA11O75493 328 aa16.66■□□□□ 0.26
YBX3-201ENST00000228251 RIPPLY1Q0D2K3 151 aa16.66■□□□□ 0.26
YBX3-201ENST00000228251 MICBQ29980 383 aa16.66■□□□□ 0.26
YBX3-201ENST00000228251 ASCL4Q6XD76 172 aa16.66■□□□□ 0.26
YBX3-201ENST00000228251 C17orf107Q6ZR85 190 aa16.66■□□□□ 0.26
YBX3-201ENST00000228251 COLCA1Q6ZS62 124 aa16.66■□□□□ 0.26
YBX3-201ENST00000228251 GALNTL5Q7Z4T8 443 aa16.66■□□□□ 0.26
YBX3-201ENST00000228251 TMED4Q7Z7H5 227 aa16.66■□□□□ 0.26
YBX3-201ENST00000228251 HOGA1Q86XE5 327 aa16.66■□□□□ 0.26
YBX3-201ENST00000228251 ZFP62Q8NB50 900 aaPredicted RBP16.66■□□□□ 0.26
YBX3-201ENST00000228251 FBXW5Q969U6 566 aa16.66■□□□□ 0.26
YBX3-201ENST00000228251 RGCCQ9H4X1 137 aa16.66■□□□□ 0.26
YBX3-201ENST00000228251 GPR173Q9NS66 373 aa16.66■□□□□ 0.26
YBX3-201ENST00000228251 KLF13Q9Y2Y9 288 aaPredicted RBP16.66■□□□□ 0.26
YBX3-201ENST00000228251 IGKV1-27A0A075B6S5 117 aa16.65■□□□□ 0.26
YBX3-201ENST00000228251 ZNF724A8MTY0 619 aa16.65■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms