RNA–Protein interactions for RNA: ENST00000216639.7

VRK1-201, Transcript of vaccinia related kinase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VRK1, Length 1,745 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1-201ENST00000216639 CCNOP22674 350 aa15.12■□□□□ 0.01
VRK1-201ENST00000216639 MEF2DQ14814 521 aa15.12■□□□□ 0.01
VRK1-201ENST00000216639 TMEM42Q69YG0 159 aa15.12■□□□□ 0.01
VRK1-201ENST00000216639 SNIP1Q8TAD8 396 aaKnown RBP15.12■□□□□ 0.01
VRK1-201ENST00000216639 APOBEC3DQ96AK3 386 aaPredicted RBP15.12■□□□□ 0.01
VRK1-201ENST00000216639 BORCS8Q96FH0 119 aa15.12■□□□□ 0.01
VRK1-201ENST00000216639 GINS4Q9BRT9 223 aa15.12■□□□□ 0.01
VRK1-201ENST00000216639 NICN1Q9BSH3 213 aa15.12■□□□□ 0.01
VRK1-201ENST00000216639 GPN1Q9HCN4 374 aaPredicted RBP15.12■□□□□ 0.01
VRK1-201ENST00000216639 IFT46Q9NQC8 304 aa15.12■□□□□ 0.01
VRK1-201ENST00000216639 POU2F3Q9UKI9 436 aa15.12■□□□□ 0.01
VRK1-201ENST00000216639 SLC7A11Q9UPY5 501 aa15.12■□□□□ 0.01
VRK1-201ENST00000216639 ZNF407Q9C0G0 2248 aa15.11■□□□□ 0.01
VRK1-201ENST00000216639 LOC100509620A0A075B734 347 aa15.11■□□□□ 0.01
VRK1-201ENST00000216639 SSNA1O43805 119 aa15.11■□□□□ 0.01
VRK1-201ENST00000216639 SERPINA5P05154 406 aa15.11■□□□□ 0.01
VRK1-201ENST00000216639 GNB3P16520 340 aa15.11■□□□□ 0.01
VRK1-201ENST00000216639 RBP2P50120 134 aa15.11■□□□□ 0.01
VRK1-201ENST00000216639 MECP2P51608 486 aaKnown RBP15.11■□□□□ 0.01
VRK1-201ENST00000216639 GNG2P59768 71 aa15.11■□□□□ 0.01
VRK1-201ENST00000216639 RPS27AP62979 156 aaKnown RBP15.11■□□□□ 0.01
VRK1-201ENST00000216639 MRPS15P82914 257 aaKnown RBP15.11■□□□□ 0.01
VRK1-201ENST00000216639 TGFBR3Q03167 851 aa15.11■□□□□ 0.01
VRK1-201ENST00000216639 ARL6IP1Q15041 203 aa15.11■□□□□ 0.01
VRK1-201ENST00000216639 FCN2Q15485 313 aa15.11■□□□□ 0.01
VRK1-201ENST00000216639 PNLIPRP3Q17RR3 467 aa15.11■□□□□ 0.01
VRK1-201ENST00000216639 NOXA1Q86UR1 476 aa15.11■□□□□ 0.01
VRK1-201ENST00000216639 OR51S1Q8NGJ8 323 aa15.11■□□□□ 0.01
VRK1-201ENST00000216639 OR51T1Q8NGJ9 327 aa15.11■□□□□ 0.01
VRK1-201ENST00000216639 DVL3Q92997 716 aaPredicted RBP15.11■□□□□ 0.01
VRK1-201ENST00000216639 ZNF486Q96H40 463 aaPredicted RBP15.11■□□□□ 0.01
VRK1-201ENST00000216639 MED30Q96HR3 178 aa15.11■□□□□ 0.01
VRK1-201ENST00000216639 ELL3Q9HB65 397 aaPredicted RBP15.11■□□□□ 0.01
VRK1-201ENST00000216639 KCNN3Q9UGI6 736 aa15.11■□□□□ 0.01
VRK1-201ENST00000216639 KLK13Q9UKR3 277 aa15.11■□□□□ 0.01
VRK1-201ENST00000216639 FAM230AA0A1W2PPH8 454 aa15.1■□□□□ 0.01
VRK1-201ENST00000216639 WIPF3A6NGB9 483 aa15.1■□□□□ 0.01
VRK1-201ENST00000216639 DLL1O00548 723 aa15.1■□□□□ 0.01
VRK1-201ENST00000216639 IL18BPO95998 194 aa15.1■□□□□ 0.01
VRK1-201ENST00000216639 CD74P04233 296 aa15.1■□□□□ 0.01
VRK1-201ENST00000216639 TMEM225BP0DP42 221 aa15.1■□□□□ 0.01
VRK1-201ENST00000216639 HIST1H1DP16402 221 aaKnown RBP15.1■□□□□ 0.01
VRK1-201ENST00000216639 MGMTP16455 207 aa15.1■□□□□ 0.01
VRK1-201ENST00000216639 SERPINA2P20848 420 aa15.1■□□□□ 0.01
VRK1-201ENST00000216639 APLNRP35414 380 aa15.1■□□□□ 0.01
VRK1-201ENST00000216639 EIF2S3P41091 472 aaKnown RBP15.1■□□□□ 0.01
VRK1-201ENST00000216639 TNK1Q13470 666 aa15.1■□□□□ 0.01
VRK1-201ENST00000216639 ST3GAL2Q16842 350 aa15.1■□□□□ 0.01
VRK1-201ENST00000216639 DMRTC1Q5HYR2 192 aa15.1■□□□□ 0.01
VRK1-201ENST00000216639 OR4D10Q8NGI6 311 aa15.1■□□□□ 0.01
VRK1-201ENST00000216639 BCL2L2Q92843 193 aaPredicted RBP15.1■□□□□ 0.01
VRK1-201ENST00000216639 METTL9Q9H1A3 318 aa15.1■□□□□ 0.01
VRK1-201ENST00000216639 BEX1Q9HBH7 125 aa15.1■□□□□ 0.01
VRK1-201ENST00000216639 SCP2D1Q9UJQ7 156 aa15.1■□□□□ 0.01
VRK1-201ENST00000216639 ELF5Q9UKW6 265 aaPredicted RBP15.1■□□□□ 0.01
VRK1-201ENST00000216639 PAIP2BQ9ULR5 123 aaKnown RBP15.1■□□□□ 0.01
VRK1-201ENST00000216639 IL5P05113 134 aa15.09■□□□□ 0.01
VRK1-201ENST00000216639 FCER2P06734 321 aa15.09■□□□□ 0.01
VRK1-201ENST00000216639 CPT2P23786 658 aa15.09■□□□□ 0.01
VRK1-201ENST00000216639 FUT6P51993 359 aa15.09■□□□□ 0.01
VRK1-201ENST00000216639 ATP1B3P54709 279 aa15.09■□□□□ 0.01
VRK1-201ENST00000216639 CRIP3Q6Q6R5 217 aa15.09■□□□□ 0.01
VRK1-201ENST00000216639 GLDNQ6ZMI3 551 aaPredicted RBP15.09■□□□□ 0.01
VRK1-201ENST00000216639 FAM214BQ7L5A3 538 aa15.09■□□□□ 0.01
VRK1-201ENST00000216639 FAM89BQ8N5H3 189 aa15.09■□□□□ 0.01
VRK1-201ENST00000216639 BEST4Q8NFU0 473 aa15.09■□□□□ 0.01
VRK1-201ENST00000216639 TRAF4Q9BUZ4 470 aaPredicted RBP15.09■□□□□ 0.01
VRK1-201ENST00000216639 OPA3Q9H6K4 179 aa15.09■□□□□ 0.01
VRK1-201ENST00000216639 PLSCR2Q9NRY7 297 aa15.09■□□□□ 0.01
VRK1-201ENST00000216639 DNAJC13O75165 2243 aa15.09■□□□□ 0.01
VRK1-201ENST00000216639 A0A0A6YYD4 124 aa15.09■□□□□ 0.01
VRK1-201ENST00000216639 DISC1C4P0D8 188 aa15.09■□□□□ 0.01
VRK1-201ENST00000216639 SOCS1O15524 211 aa15.09■□□□□ 0.01
VRK1-201ENST00000216639 ZNF780AO75290 641 aaPredicted RBP15.09■□□□□ 0.01
VRK1-201ENST00000216639 C1QBP02746 253 aa15.09■□□□□ 0.01
VRK1-201ENST00000216639 CSTBP04080 98 aaKnown RBP15.09■□□□□ 0.01
VRK1-201ENST00000216639 AMY2AP04746 511 aa15.09■□□□□ 0.01
VRK1-201ENST00000216639 TBPP20226 339 aa15.09■□□□□ 0.01
VRK1-201ENST00000216639 ERP29P30040 261 aaKnown RBP15.09■□□□□ 0.01
VRK1-201ENST00000216639 ZP1P60852 638 aa15.09■□□□□ 0.01
VRK1-201ENST00000216639 OR2A2Q6IF42 318 aa15.09■□□□□ 0.01
VRK1-201ENST00000216639 MOB3CQ70IA8 216 aa15.09■□□□□ 0.01
VRK1-201ENST00000216639 MRPL21Q7Z2W9 205 aaKnown RBP15.09■□□□□ 0.01
VRK1-201ENST00000216639 C1QL2Q7Z5L3 287 aa15.09■□□□□ 0.01
VRK1-201ENST00000216639 CCDC36Q8IYA8 594 aa15.09■□□□□ 0.01
VRK1-201ENST00000216639 NUDCD2Q8WVJ2 157 aa15.09■□□□□ 0.01
VRK1-201ENST00000216639 PIGCQ92535 297 aa15.09■□□□□ 0.01
VRK1-201ENST00000216639 WNT2BQ93097 391 aa15.09■□□□□ 0.01
VRK1-201ENST00000216639 POM121L2Q96KW2 1035 aa15.09■□□□□ 0.01
VRK1-201ENST00000216639 SLC25A21Q9BQT8 299 aaPredicted RBP15.09■□□□□ 0.01
VRK1-201ENST00000216639 TM2D1Q9BX74 207 aa15.09■□□□□ 0.01
VRK1-201ENST00000216639 NPDC1Q9NQX5 325 aaPredicted RBP15.09■□□□□ 0.01
VRK1-201ENST00000216639 ZNF222Q9UK12 451 aa15.09■□□□□ 0.01
VRK1-201ENST00000216639 PLEKHA6Q9Y2H5 1048 aa15.09■□□□□ 0.01
VRK1-201ENST00000216639 A0A1W2PP11 408 aa15.08■□□□□ 0
VRK1-201ENST00000216639 OR14I1A6ND48 311 aa15.08■□□□□ 0
VRK1-201ENST00000216639 ZNF503-AS2A6NEH8 195 aa15.08■□□□□ 0
VRK1-201ENST00000216639 SNRPGP15A8MWD9 76 aa15.08■□□□□ 0
VRK1-201ENST00000216639 AHRRA9YTQ3 701 aa15.08■□□□□ 0
VRK1-201ENST00000216639 CREBL2O60519 120 aaPredicted RBP15.08■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 58.6 ms