RNA–Protein interactions for RNA: ENST00000216484.6

SPTLC2-201, Transcript of serine palmitoyltransferase long chain base subunit 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPTLC2, Length 8,170 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC2-201ENST00000216484 LOC389332A0A1B0GUA5 103 aa13.26□□□□□ -0.29
SPTLC2-201ENST00000216484 ZNF841Q6ZN19 808 aa13.26□□□□□ -0.29
SPTLC2-201ENST00000216484 FLVCR2Q9UPI3 526 aa13.26□□□□□ -0.29
SPTLC2-201ENST00000216484 OR5B21A6NL26 309 aa13.25□□□□□ -0.29
SPTLC2-201ENST00000216484 APOBEC1P41238 236 aaKnown RBP13.25□□□□□ -0.29
SPTLC2-201ENST00000216484 ADAT3Q96EY9 351 aaPredicted RBP13.25□□□□□ -0.29
SPTLC2-201ENST00000216484 GPANK1O95872 356 aa13.25□□□□□ -0.29
SPTLC2-201ENST00000216484 ORM2P19652 201 aa13.25□□□□□ -0.29
SPTLC2-201ENST00000216484 ARRB2P32121 409 aa13.25□□□□□ -0.29
SPTLC2-201ENST00000216484 ZXDAP98168 799 aa13.25□□□□□ -0.29
SPTLC2-201ENST00000216484 TMEM241Q24JQ0 296 aa13.25□□□□□ -0.29
SPTLC2-201ENST00000216484 CYS1Q717R9 158 aa13.25□□□□□ -0.29
SPTLC2-201ENST00000216484 WDR89Q96FK6 387 aaPredicted RBP13.25□□□□□ -0.29
SPTLC2-201ENST00000216484 ZIC5Q96T25 663 aa13.25□□□□□ -0.29
SPTLC2-201ENST00000216484 CITED2Q99967 270 aaPredicted RBP13.25□□□□□ -0.29
SPTLC2-201ENST00000216484 PAM16Q9Y3D7 125 aa13.25□□□□□ -0.29
SPTLC2-201ENST00000216484 IL2RAP01589 272 aa13.25□□□□□ -0.29
SPTLC2-201ENST00000216484 HIST1H1CP16403 213 aaKnown RBP13.25□□□□□ -0.29
SPTLC2-201ENST00000216484 GABRB1P18505 474 aa13.25□□□□□ -0.29
SPTLC2-201ENST00000216484 PPIAP62937 165 aaKnown RBP13.25□□□□□ -0.29
SPTLC2-201ENST00000216484 SPATA46Q5T0L3 261 aa13.25□□□□□ -0.29
SPTLC2-201ENST00000216484 OR4A47Q6IF82 309 aa13.25□□□□□ -0.29
SPTLC2-201ENST00000216484 ZNF680Q8NEM1 530 aa13.25□□□□□ -0.29
SPTLC2-201ENST00000216484 UBE2FQ969M7 185 aa13.25□□□□□ -0.29
SPTLC2-201ENST00000216484 TSPAN13O95857 204 aa13.25□□□□□ -0.29
SPTLC2-201ENST00000216484 RTP2Q5QGT7 225 aa13.25□□□□□ -0.29
SPTLC2-201ENST00000216484 LYG2Q86SG7 212 aa13.25□□□□□ -0.29
SPTLC2-201ENST00000216484 PLPPR2Q96GM1 343 aa13.25□□□□□ -0.29
SPTLC2-201ENST00000216484 SIT1Q9Y3P8 196 aa13.25□□□□□ -0.29
SPTLC2-201ENST00000216484 TIMM10BQ9Y5J6 103 aa13.25□□□□□ -0.29
SPTLC2-201ENST00000216484 MFNGO00587 321 aa13.25□□□□□ -0.29
SPTLC2-201ENST00000216484 ZNF749O43361 778 aa13.25□□□□□ -0.29
SPTLC2-201ENST00000216484 POLR2IP36954 125 aaKnown RBP13.25□□□□□ -0.29
SPTLC2-201ENST00000216484 CADM3Q8N126 398 aa13.25□□□□□ -0.29
SPTLC2-201ENST00000216484 MBD3L1Q8WWY6 194 aa13.25□□□□□ -0.29
SPTLC2-201ENST00000216484 ASCL1P50553 236 aa13.25□□□□□ -0.29
SPTLC2-201ENST00000216484 SPINK9Q5DT21 86 aa13.25□□□□□ -0.29
SPTLC2-201ENST00000216484 BPIFA4PQ86YQ2 179 aa13.25□□□□□ -0.29
SPTLC2-201ENST00000216484 OR52N1Q8NH53 320 aa13.25□□□□□ -0.29
SPTLC2-201ENST00000216484 TBX15Q96SF7 602 aa13.25□□□□□ -0.29
SPTLC2-201ENST00000216484 RSRP1Q9BUV0 290 aa13.25□□□□□ -0.29
SPTLC2-201ENST00000216484 RNF167Q9H6Y7 350 aa13.25□□□□□ -0.29
SPTLC2-201ENST00000216484 EXOGQ9Y2C4 368 aaKnown RBP13.25□□□□□ -0.29
SPTLC2-201ENST00000216484 ARNTLO00327 626 aa13.24□□□□□ -0.29
SPTLC2-201ENST00000216484 HSF5Q4G112 596 aaPredicted RBP13.24□□□□□ -0.29
SPTLC2-201ENST00000216484 OR2Z1Q8NG97 314 aa13.24□□□□□ -0.29
SPTLC2-201ENST00000216484 OR1N1Q8NGS0 311 aa13.24□□□□□ -0.29
SPTLC2-201ENST00000216484 ROBO4Q8WZ75 1007 aa13.24□□□□□ -0.29
SPTLC2-201ENST00000216484 HGDQ93099 445 aa13.24□□□□□ -0.29
SPTLC2-201ENST00000216484 FAM210BQ96KR6 192 aa13.24□□□□□ -0.29
SPTLC2-201ENST00000216484 HINT3Q9NQE9 182 aaKnown RBP13.24□□□□□ -0.29
SPTLC2-201ENST00000216484 CRYAAP02489 173 aa13.24□□□□□ -0.29
SPTLC2-201ENST00000216484 CTSCP53634 463 aa13.24□□□□□ -0.29
SPTLC2-201ENST00000216484 ABI3BPQ7Z7G0 1075 aa13.24□□□□□ -0.29
SPTLC2-201ENST00000216484 KCNE4Q8WWG9 221 aa13.24□□□□□ -0.29
SPTLC2-201ENST00000216484 NPAS1Q99742 590 aa13.24□□□□□ -0.29
SPTLC2-201ENST00000216484 OR2D2Q9H210 308 aa13.24□□□□□ -0.29
SPTLC2-201ENST00000216484 FKBP11Q9NYL4 201 aa13.24□□□□□ -0.29
SPTLC2-201ENST00000216484 TMPRSS11DO60235 418 aa13.24□□□□□ -0.29
SPTLC2-201ENST00000216484 CA3P07451 260 aa13.24□□□□□ -0.29
SPTLC2-201ENST00000216484 FECHP22830 423 aa13.24□□□□□ -0.29
SPTLC2-201ENST00000216484 FBXL6Q8N531 539 aa13.24□□□□□ -0.29
SPTLC2-201ENST00000216484 SPATA31D1Q6ZQQ2 1576 aa13.24□□□□□ -0.29
SPTLC2-201ENST00000216484 SLC19A1P41440 591 aa13.24□□□□□ -0.29
SPTLC2-201ENST00000216484 CSNK1EP49674 416 aaKnown RBP13.24□□□□□ -0.29
SPTLC2-201ENST00000216484 PLAURQ03405 335 aa13.24□□□□□ -0.29
SPTLC2-201ENST00000216484 DLK2Q6UY11 383 aa13.24□□□□□ -0.29
SPTLC2-201ENST00000216484 PARS2Q7L3T8 475 aaKnown RBP13.24□□□□□ -0.29
SPTLC2-201ENST00000216484 LINC00469Q8N7U9 141 aa13.24□□□□□ -0.29
SPTLC2-201ENST00000216484 MFRPQ9BY79 579 aa13.24□□□□□ -0.29
SPTLC2-201ENST00000216484 SLIT3O75094 1523 aa13.24□□□□□ -0.29
SPTLC2-201ENST00000216484 A0A1B0GUL6 1792 aa13.24□□□□□ -0.29
SPTLC2-201ENST00000216484 SHPRHQ149N8 1683 aa13.24□□□□□ -0.29
SPTLC2-201ENST00000216484 SPRY3O43610 288 aa13.24□□□□□ -0.29
SPTLC2-201ENST00000216484 INHBCP55103 352 aa13.24□□□□□ -0.29
SPTLC2-201ENST00000216484 EGR3Q06889 387 aa13.24□□□□□ -0.29
SPTLC2-201ENST00000216484 TXLNGYQ9BZA5 131 aa13.24□□□□□ -0.29
SPTLC2-201ENST00000216484 PROCRQ9UNN8 238 aa13.24□□□□□ -0.29
SPTLC2-201ENST00000216484 HSFX4A0A1B0GTS1 333 aaPredicted RBP13.24□□□□□ -0.29
SPTLC2-201ENST00000216484 HSFX3A0A1B0GWH4 333 aaPredicted RBP13.24□□□□□ -0.29
SPTLC2-201ENST00000216484 C7orf72A4D263 438 aa13.24□□□□□ -0.29
SPTLC2-201ENST00000216484 PPP6CO00743 305 aa13.24□□□□□ -0.29
SPTLC2-201ENST00000216484 NMUP48645 174 aa13.24□□□□□ -0.29
SPTLC2-201ENST00000216484 ZNF750Q32MQ0 723 aa13.24□□□□□ -0.29
SPTLC2-201ENST00000216484 BAP18Q8IXM2 172 aa13.24□□□□□ -0.29
SPTLC2-201ENST00000216484 OR2I1PQ8NGU4 316 aa13.24□□□□□ -0.29
SPTLC2-201ENST00000216484 SPAG8Q99932 426 aaPredicted RBP13.24□□□□□ -0.29
SPTLC2-201ENST00000216484 FNDC7Q5VTL7 733 aa13.24□□□□□ -0.29
SPTLC2-201ENST00000216484 UQCC3Q6UW78 93 aa13.24□□□□□ -0.29
SPTLC2-201ENST00000216484 MUC15Q8N387 334 aa13.24□□□□□ -0.29
SPTLC2-201ENST00000216484 LMX1BO60663 402 aa13.23□□□□□ -0.29
SPTLC2-201ENST00000216484 FGF8P55075 233 aaPredicted RBP13.23□□□□□ -0.29
SPTLC2-201ENST00000216484 SARGQ9BW04 601 aa13.23□□□□□ -0.29
SPTLC2-201ENST00000216484 OOEPA6NGQ2 149 aa13.23□□□□□ -0.29
SPTLC2-201ENST00000216484 SLC22A20A6NK97 555 aa13.23□□□□□ -0.29
SPTLC2-201ENST00000216484 TCF21O43680 179 aa13.23□□□□□ -0.29
SPTLC2-201ENST00000216484 CD1EP15812 388 aa13.23□□□□□ -0.29
SPTLC2-201ENST00000216484 D2HGDHQ8N465 521 aa13.23□□□□□ -0.29
SPTLC2-201ENST00000216484 AKR7A2O43488 359 aa13.23□□□□□ -0.29
SPTLC2-201ENST00000216484 ADGRB2O60241 1585 aa13.23□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 60 ms