RNA–Protein interactions for RNA: ENST00000162749.6

TNFRSF1A-201, Transcript of TNF receptor superfamily member 1A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TNFRSF1A, Length 2,223 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-201ENST00000162749 FAM57AQ8TBR7 257 aa17.06■□□□□ 0.32
TNFRSF1A-201ENST00000162749 PP6455Q8WZ26 134 aa17.06■□□□□ 0.32
TNFRSF1A-201ENST00000162749 STARD4Q96DR4 205 aa17.06■□□□□ 0.32
TNFRSF1A-201ENST00000162749 MS4A3Q96HJ5 214 aa17.06■□□□□ 0.32
TNFRSF1A-201ENST00000162749 POM121L2Q96KW2 1035 aa17.06■□□□□ 0.32
TNFRSF1A-201ENST00000162749 ZNF75AQ96N20 296 aa17.06■□□□□ 0.32
TNFRSF1A-201ENST00000162749 UQCC2Q9BRT2 126 aa17.06■□□□□ 0.32
TNFRSF1A-201ENST00000162749 RGCCQ9H4X1 137 aa17.06■□□□□ 0.32
TNFRSF1A-201ENST00000162749 HEATR1Q9H583 2144 aaKnown RBP17.06■□□□□ 0.32
TNFRSF1A-201ENST00000162749 GABARAPH6UMI1 98 aa17.06■□□□□ 0.32
TNFRSF1A-201ENST00000162749 CDK2P24941 298 aa17.06■□□□□ 0.32
TNFRSF1A-201ENST00000162749 ZNF93P35789 620 aaPredicted RBP17.06■□□□□ 0.32
TNFRSF1A-201ENST00000162749 PLP2Q04941 152 aa17.06■□□□□ 0.32
TNFRSF1A-201ENST00000162749 FCN2Q15485 313 aa17.06■□□□□ 0.32
TNFRSF1A-201ENST00000162749 C1orf185Q5T7R7 199 aa17.06■□□□□ 0.32
TNFRSF1A-201ENST00000162749 C3P1Q6ZMU1 363 aa17.06■□□□□ 0.32
TNFRSF1A-201ENST00000162749 MDP1Q86V88 176 aa17.06■□□□□ 0.32
TNFRSF1A-201ENST00000162749 SEMA6DQ8NFY4 1073 aa17.06■□□□□ 0.32
TNFRSF1A-201ENST00000162749 KLK11Q9UBX7 282 aa17.06■□□□□ 0.32
TNFRSF1A-201ENST00000162749 CGAP01215 116 aa17.05■□□□□ 0.32
TNFRSF1A-201ENST00000162749 ERP29P30040 261 aaKnown RBP17.05■□□□□ 0.32
TNFRSF1A-201ENST00000162749 GABRA6Q16445 453 aa17.05■□□□□ 0.32
TNFRSF1A-201ENST00000162749 TMEM255AQ5JRV8 349 aa17.05■□□□□ 0.32
TNFRSF1A-201ENST00000162749 SSC4DQ8WTU2 575 aa17.05■□□□□ 0.32
TNFRSF1A-201ENST00000162749 COPZ2Q9P299 210 aa17.05■□□□□ 0.32
TNFRSF1A-201ENST00000162749 NBASA2RRP1 2371 aa17.05■□□□□ 0.32
TNFRSF1A-201ENST00000162749 hCG_38984A0A1B0GV85 526 aa17.05■□□□□ 0.32
TNFRSF1A-201ENST00000162749 CIB4A0PJX0 185 aa17.05■□□□□ 0.32
TNFRSF1A-201ENST00000162749 GMDSO60547 372 aa17.05■□□□□ 0.32
TNFRSF1A-201ENST00000162749 FAM3AP98173 230 aa17.05■□□□□ 0.32
TNFRSF1A-201ENST00000162749 MAB21L1Q13394 359 aa17.05■□□□□ 0.32
TNFRSF1A-201ENST00000162749 UBE2V2Q15819 145 aa17.05■□□□□ 0.32
TNFRSF1A-201ENST00000162749 TMEM69Q5SWH9 247 aa17.05■□□□□ 0.32
TNFRSF1A-201ENST00000162749 BIVMQ86UB2 503 aa17.05■□□□□ 0.32
TNFRSF1A-201ENST00000162749 SPSB4Q96A44 273 aa17.05■□□□□ 0.32
TNFRSF1A-201ENST00000162749 XRCC2O43543 280 aa17.04■□□□□ 0.32
TNFRSF1A-201ENST00000162749 CTAG2O75638 210 aa17.04■□□□□ 0.32
TNFRSF1A-201ENST00000162749 HCKP08631 526 aa17.04■□□□□ 0.32
TNFRSF1A-201ENST00000162749 TSC22D1Q15714 1073 aa17.04■□□□□ 0.32
TNFRSF1A-201ENST00000162749 BTN2A1Q7KYR7 527 aa17.04■□□□□ 0.32
TNFRSF1A-201ENST00000162749 OR11H7Q8NGC8 314 aa17.04■□□□□ 0.32
TNFRSF1A-201ENST00000162749 ZFAND1Q8TCF1 268 aa17.04■□□□□ 0.32
TNFRSF1A-201ENST00000162749 SNRNP40Q96DI7 357 aaKnown RBP17.04■□□□□ 0.32
TNFRSF1A-201ENST00000162749 HRASLSQ9HDD0 168 aa17.04■□□□□ 0.32
TNFRSF1A-201ENST00000162749 TUBD1Q9UJT1 453 aa17.04■□□□□ 0.32
TNFRSF1A-201ENST00000162749 PROCRQ9UNN8 238 aa17.04■□□□□ 0.32
TNFRSF1A-201ENST00000162749 POLEQ07864 2286 aa17.04■□□□□ 0.32
TNFRSF1A-201ENST00000162749 A0A1W2PR80 420 aa17.04■□□□□ 0.32
TNFRSF1A-201ENST00000162749 LDLRAD4O15165 306 aa17.04■□□□□ 0.32
TNFRSF1A-201ENST00000162749 ALX3O95076 343 aa17.04■□□□□ 0.32
TNFRSF1A-201ENST00000162749 IL2RAP01589 272 aa17.04■□□□□ 0.32
TNFRSF1A-201ENST00000162749 CRHP06850 196 aa17.04■□□□□ 0.32
TNFRSF1A-201ENST00000162749 HOXD11P31277 338 aaPredicted RBP17.04■□□□□ 0.32
TNFRSF1A-201ENST00000162749 TIMP3P35625 211 aa17.04■□□□□ 0.32
TNFRSF1A-201ENST00000162749 RIPPLY1Q0D2K3 151 aa17.04■□□□□ 0.32
TNFRSF1A-201ENST00000162749 NDUFA5Q16718 116 aa17.04■□□□□ 0.32
TNFRSF1A-201ENST00000162749 ZNF610Q8N9Z0 462 aa17.04■□□□□ 0.32
TNFRSF1A-201ENST00000162749 TRAF4Q9BUZ4 470 aaPredicted RBP17.04■□□□□ 0.32
TNFRSF1A-201ENST00000162749 OPN3Q9H1Y3 402 aaPredicted RBP17.04■□□□□ 0.32
TNFRSF1A-201ENST00000162749 MED28Q9H204 178 aa17.04■□□□□ 0.32
TNFRSF1A-201ENST00000162749 ALDOBP05062 364 aa17.03■□□□□ 0.32
TNFRSF1A-201ENST00000162749 SERPINA5P05154 406 aa17.03■□□□□ 0.32
TNFRSF1A-201ENST00000162749 MNDAP41218 407 aa17.03■□□□□ 0.32
TNFRSF1A-201ENST00000162749 GSK3AP49840 483 aa17.03■□□□□ 0.32
TNFRSF1A-201ENST00000162749 TAS2R20P59543 309 aa17.03■□□□□ 0.32
TNFRSF1A-201ENST00000162749 OR8B8Q15620 311 aa17.03■□□□□ 0.32
TNFRSF1A-201ENST00000162749 PRR30Q53SZ7 412 aaPredicted RBP17.03■□□□□ 0.32
TNFRSF1A-201ENST00000162749 OR10K2Q6IF99 312 aa17.03■□□□□ 0.32
TNFRSF1A-201ENST00000162749 CDH26Q8IXH8 852 aa17.03■□□□□ 0.32
TNFRSF1A-201ENST00000162749 PKD1L2Q7Z442 2459 aa17.03■□□□□ 0.32
TNFRSF1A-201ENST00000162749 H2AFB2P0C5Z0 115 aa17.02■□□□□ 0.32
TNFRSF1A-201ENST00000162749 APLNRP35414 380 aa17.02■□□□□ 0.32
TNFRSF1A-201ENST00000162749 RAG2P55895 527 aa17.02■□□□□ 0.32
TNFRSF1A-201ENST00000162749 UBE2NP61088 152 aaKnown RBP17.02■□□□□ 0.32
TNFRSF1A-201ENST00000162749 EIF2S3LQ2VIR3 472 aaKnown RBP17.02■□□□□ 0.32
TNFRSF1A-201ENST00000162749 SFRP4Q6FHJ7 346 aaPredicted RBP17.02■□□□□ 0.32
TNFRSF1A-201ENST00000162749 CRIP3Q6Q6R5 217 aa17.02■□□□□ 0.32
TNFRSF1A-201ENST00000162749 CCDC36Q8IYA8 594 aa17.02■□□□□ 0.32
TNFRSF1A-201ENST00000162749 PAQR4Q8N4S7 273 aaPredicted RBP17.02■□□□□ 0.32
TNFRSF1A-201ENST00000162749 NPRL2Q8WTW4 380 aa17.02■□□□□ 0.32
TNFRSF1A-201ENST00000162749 FCAMRQ8WWV6 532 aa17.02■□□□□ 0.32
TNFRSF1A-201ENST00000162749 APOBEC3DQ96AK3 386 aaPredicted RBP17.02■□□□□ 0.32
TNFRSF1A-201ENST00000162749 BOD1Q96IK1 185 aa17.02■□□□□ 0.32
TNFRSF1A-201ENST00000162749 OR51J1Q9H342 316 aa17.02■□□□□ 0.32
TNFRSF1A-201ENST00000162749 MYEF2Q9P2K5 600 aaKnown RBP17.02■□□□□ 0.32
TNFRSF1A-201ENST00000162749 KDM4BO94953 1096 aa17.02■□□□□ 0.32
TNFRSF1A-201ENST00000162749 NGFP01138 241 aa17.02■□□□□ 0.32
TNFRSF1A-201ENST00000162749 PRF1P14222 555 aa17.02■□□□□ 0.32
TNFRSF1A-201ENST00000162749 ZNF14P17017 642 aaPredicted RBP17.02■□□□□ 0.32
TNFRSF1A-201ENST00000162749 CAPZA1P52907 286 aa17.02■□□□□ 0.32
TNFRSF1A-201ENST00000162749 C6orf183Q5T699 404 aa17.02■□□□□ 0.32
TNFRSF1A-201ENST00000162749 LAMTOR1Q6IAA8 161 aa17.02■□□□□ 0.32
TNFRSF1A-201ENST00000162749 MYPOPQ86VE0 399 aaPredicted RBP17.02■□□□□ 0.32
TNFRSF1A-201ENST00000162749 ZNF101Q8IZC7 436 aa17.02■□□□□ 0.32
TNFRSF1A-201ENST00000162749 C1orf162Q8NEQ5 155 aaPredicted RBP17.02■□□□□ 0.32
TNFRSF1A-201ENST00000162749 SLC30A7Q8NEW0 376 aa17.02■□□□□ 0.32
TNFRSF1A-201ENST00000162749 ASF1BQ9NVP2 202 aa17.02■□□□□ 0.32
TNFRSF1A-201ENST00000162749 XRCC3O43542 346 aa17.01■□□□□ 0.31
TNFRSF1A-201ENST00000162749 GK2Q14410 553 aaPredicted RBP17.01■□□□□ 0.31
TNFRSF1A-201ENST00000162749 KISS1Q15726 138 aa17.01■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 44.9 ms