RNA–Protein interactions for RNA: ENST00000642041.1

PHGDH-234, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 943 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-234ENST00000642041 LSRQ86X29 649 aaPredicted RBP14.97□□□□□ -0.01
PHGDH-234ENST00000642041 C1orf174Q8IYL3 243 aa14.97□□□□□ -0.01
PHGDH-234ENST00000642041 UBE2J2Q8N2K1 259 aa14.97□□□□□ -0.01
PHGDH-234ENST00000642041 LRRC18Q8N456 261 aa14.97□□□□□ -0.01
PHGDH-234ENST00000642041 POC5Q8NA72 575 aa14.97□□□□□ -0.01
PHGDH-234ENST00000642041 C1orf162Q8NEQ5 155 aaPredicted RBP14.97□□□□□ -0.01
PHGDH-234ENST00000642041 OR6K3Q8NGY3 331 aa14.97□□□□□ -0.01
PHGDH-234ENST00000642041 OR2H1Q9GZK4 316 aa14.97□□□□□ -0.01
PHGDH-234ENST00000642041 RNF121Q9H920 327 aa14.97□□□□□ -0.01
PHGDH-234ENST00000642041 LIN7BQ9HAP6 207 aa14.97□□□□□ -0.01
PHGDH-234ENST00000642041 OBP2BQ9NPH6 170 aa14.97□□□□□ -0.01
PHGDH-234ENST00000642041 TUBG2Q9NRH3 451 aa14.97□□□□□ -0.01
PHGDH-234ENST00000642041 PCDHB16Q9NRJ7 776 aa14.97□□□□□ -0.01
PHGDH-234ENST00000642041 SLC7A10Q9NS82 523 aa14.97□□□□□ -0.01
PHGDH-234ENST00000642041 CLCF1Q9UBD9 225 aa14.97□□□□□ -0.01
PHGDH-234ENST00000642041 LOC100289279A0A1B0GTE1 492 aa14.96□□□□□ -0.01
PHGDH-234ENST00000642041 METTL21EPA6NDL7 271 aa14.96□□□□□ -0.01
PHGDH-234ENST00000642041 FIGNL2A6NMB9 653 aa14.96□□□□□ -0.01
PHGDH-234ENST00000642041 ECDO95905 644 aaPredicted RBP14.96□□□□□ -0.01
PHGDH-234ENST00000642041 IGLV3-1P01715 115 aa14.96□□□□□ -0.01
PHGDH-234ENST00000642041 MAS1P04201 325 aa14.96□□□□□ -0.01
PHGDH-234ENST00000642041 GSTT2BP0CG30 244 aa14.96□□□□□ -0.01
PHGDH-234ENST00000642041 ELK1P19419 428 aa14.96□□□□□ -0.01
PHGDH-234ENST00000642041 RAB6AP20340 208 aa14.96□□□□□ -0.01
PHGDH-234ENST00000642041 CRYGSP22914 178 aa14.96□□□□□ -0.01
PHGDH-234ENST00000642041 HTR2CP28335 458 aa14.96□□□□□ -0.01
PHGDH-234ENST00000642041 AGTR1P30556 359 aa14.96□□□□□ -0.01
PHGDH-234ENST00000642041 MAP2K3P46734 347 aa14.96□□□□□ -0.01
PHGDH-234ENST00000642041 SLC6A9P48067 706 aa14.96□□□□□ -0.01
PHGDH-234ENST00000642041 GALK2Q01415 458 aa14.96□□□□□ -0.01
PHGDH-234ENST00000642041 SSBP1Q04837 148 aaKnown RBP14.96□□□□□ -0.01
PHGDH-234ENST00000642041 ASAH1Q13510 395 aa14.96□□□□□ -0.01
PHGDH-234ENST00000642041 KRTAP27-1Q3LI81 207 aa14.96□□□□□ -0.01
PHGDH-234ENST00000642041 NSUN5P2Q63ZY6 315 aa14.96□□□□□ -0.01
PHGDH-234ENST00000642041 STEAP3Q658P3 488 aa14.96□□□□□ -0.01
PHGDH-234ENST00000642041 SSX8Q7RTT4 187 aa14.96□□□□□ -0.01
PHGDH-234ENST00000642041 PRSS45Q7RTY3 260 aa14.96□□□□□ -0.01
PHGDH-234ENST00000642041 CD163Q86VB7 1156 aa14.96□□□□□ -0.01
PHGDH-234ENST00000642041 NR2C2APQ86WQ0 139 aa14.96□□□□□ -0.01
PHGDH-234ENST00000642041 COMMD2Q86X83 199 aa14.96□□□□□ -0.01
PHGDH-234ENST00000642041 CENPSQ8N2Z9 138 aa14.96□□□□□ -0.01
PHGDH-234ENST00000642041 FTMTQ8N4E7 242 aa14.96□□□□□ -0.01
PHGDH-234ENST00000642041 PNLDC1Q8NA58 520 aaKnown RBP14.96□□□□□ -0.01
PHGDH-234ENST00000642041 OR1M1Q8NGA1 313 aa14.96□□□□□ -0.01
PHGDH-234ENST00000642041 HAVCR1Q96D42 359 aa14.96□□□□□ -0.01
PHGDH-234ENST00000642041 FBXO17Q96EF6 278 aa14.96□□□□□ -0.01
PHGDH-234ENST00000642041 ALKBH3Q96Q83 286 aaPredicted RBP14.96□□□□□ -0.01
PHGDH-234ENST00000642041 USB1Q9BQ65 265 aaKnown RBP14.96□□□□□ -0.01
PHGDH-234ENST00000642041 NUDT16L1Q9BRJ7 211 aaKnown RBP14.96□□□□□ -0.01
PHGDH-234ENST00000642041 SLC22A4Q9H015 551 aa14.96□□□□□ -0.01
PHGDH-234ENST00000642041 FBLN5Q9UBX5 448 aa14.96□□□□□ -0.01
PHGDH-234ENST00000642041 PHF3Q92576 2039 aaKnown RBP14.95□□□□□ -0.02
PHGDH-234ENST00000642041 DNAJC13O75165 2243 aa14.95□□□□□ -0.02
PHGDH-234ENST00000642041 A0A1B0GTH9 108 aa14.95□□□□□ -0.02
PHGDH-234ENST00000642041 F5H5K5 113 aa14.95□□□□□ -0.02
PHGDH-234ENST00000642041 P2RY10O00398 339 aa14.95□□□□□ -0.02
PHGDH-234ENST00000642041 GSTZ1O43708 216 aaPredicted RBP14.95□□□□□ -0.02
PHGDH-234ENST00000642041 TPOP07202 933 aa14.95□□□□□ -0.02
PHGDH-234ENST00000642041 IL7P13232 177 aa14.95□□□□□ -0.02
PHGDH-234ENST00000642041 ZNF32P17041 273 aa14.95□□□□□ -0.02
PHGDH-234ENST00000642041 OR10A3P58181 314 aa14.95□□□□□ -0.02
PHGDH-234ENST00000642041 ARL6IP1Q15041 203 aa14.95□□□□□ -0.02
PHGDH-234ENST00000642041 ZNF79Q15937 498 aa14.95□□□□□ -0.02
PHGDH-234ENST00000642041 SLC25A35Q3KQZ1 300 aa14.95□□□□□ -0.02
PHGDH-234ENST00000642041 ZNF529Q6P280 563 aa14.95□□□□□ -0.02
PHGDH-234ENST00000642041 KRTAP1-3Q8IUG1 177 aa14.95□□□□□ -0.02
PHGDH-234ENST00000642041 RDH10Q8IZV5 341 aa14.95□□□□□ -0.02
PHGDH-234ENST00000642041 OR8B12Q8NGG6 310 aa14.95□□□□□ -0.02
PHGDH-234ENST00000642041 OR5L1Q8NGL2 311 aa14.95□□□□□ -0.02
PHGDH-234ENST00000642041 OR1J2Q8NGS2 313 aa14.95□□□□□ -0.02
PHGDH-234ENST00000642041 METTL17Q9H7H0 456 aaPredicted RBP14.95□□□□□ -0.02
PHGDH-234ENST00000642041 FAIMQ9NVQ4 179 aa14.95□□□□□ -0.02
PHGDH-234ENST00000642041 TAS2R8Q9NYW2 309 aa14.95□□□□□ -0.02
PHGDH-234ENST00000642041 V9GYS6 101 aa14.95□□□□□ -0.02
PHGDH-234ENST00000642041 HTR5AP47898 357 aa14.94□□□□□ -0.02
PHGDH-234ENST00000642041 ARF1P84077 181 aaKnown RBP14.94□□□□□ -0.02
PHGDH-234ENST00000642041 PSG4Q00888 419 aa14.94□□□□□ -0.02
PHGDH-234ENST00000642041 RIPPLY1Q0D2K3 151 aa14.94□□□□□ -0.02
PHGDH-234ENST00000642041 FAM57BQ71RH2 274 aa14.94□□□□□ -0.02
PHGDH-234ENST00000642041 C17orf78Q8N4C9 275 aa14.94□□□□□ -0.02
PHGDH-234ENST00000642041 OR51E1Q8TCB6 317 aa14.94□□□□□ -0.02
PHGDH-234ENST00000642041 RFT1Q96AA3 541 aa14.94□□□□□ -0.02
PHGDH-234ENST00000642041 SPSB1Q96BD6 273 aa14.94□□□□□ -0.02
PHGDH-234ENST00000642041 FGGYQ96C11 551 aa14.94□□□□□ -0.02
PHGDH-234ENST00000642041 ITPKCQ96DU7 683 aa14.94□□□□□ -0.02
PHGDH-234ENST00000642041 TP63Q9H3D4 680 aaPredicted RBP14.94□□□□□ -0.02
PHGDH-234ENST00000642041 GPR84Q9NQS5 396 aa14.94□□□□□ -0.02
PHGDH-234ENST00000642041 COPZ2Q9P299 210 aa14.94□□□□□ -0.02
PHGDH-234ENST00000642041 A0A1B0GTI1 187 aa14.93□□□□□ -0.02
PHGDH-234ENST00000642041 SULT1C2O00338 296 aa14.93□□□□□ -0.02
PHGDH-234ENST00000642041 CHRM2P08172 466 aa14.93□□□□□ -0.02
PHGDH-234ENST00000642041 MMP7P09237 267 aaPredicted RBP14.93□□□□□ -0.02
PHGDH-234ENST00000642041 B4GALT1P15291 398 aa14.93□□□□□ -0.02
PHGDH-234ENST00000642041 ARSBP15848 533 aa14.93□□□□□ -0.02
PHGDH-234ENST00000642041 PRKACBP22694 351 aa14.93□□□□□ -0.02
PHGDH-234ENST00000642041 NTF4P34130 210 aa14.93□□□□□ -0.02
PHGDH-234ENST00000642041 MALLQ13021 153 aa14.93□□□□□ -0.02
PHGDH-234ENST00000642041 CNN3Q15417 329 aaKnown RBP14.93□□□□□ -0.02
PHGDH-234ENST00000642041 ODF4Q2M2E3 257 aa14.93□□□□□ -0.02
PHGDH-234ENST00000642041 SHEQ5VZ18 495 aa14.93□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms