RNA–Protein interactions for RNA: ENST00000641375.1

PHGDH-216, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 2,196 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-216ENST00000641375 OR1K1Q8NGR3 316 aa14.31□□□□□ -0.12
PHGDH-216ENST00000641375 NANOS1Q8WY41 292 aaKnown RBP14.31□□□□□ -0.12
PHGDH-216ENST00000641375 AKAP1Q92667 903 aaKnown RBP eCLIP14.31□□□□□ -0.12
PHGDH-216ENST00000641375 NLKQ9UBE8 527 aa14.31□□□□□ -0.12
PHGDH-216ENST00000641375 FBLN5Q9UBX5 448 aa14.31□□□□□ -0.12
PHGDH-216ENST00000641375 NUP50Q9UKX7 468 aa14.31□□□□□ -0.12
PHGDH-216ENST00000641375 WISP2O76076 250 aa14.3□□□□□ -0.12
PHGDH-216ENST00000641375 IL18BPO95998 194 aa14.3□□□□□ -0.12
PHGDH-216ENST00000641375 PRF1P14222 555 aa14.3□□□□□ -0.12
PHGDH-216ENST00000641375 RAB1AP62820 205 aa14.3□□□□□ -0.12
PHGDH-216ENST00000641375 PLP2Q04941 152 aa14.3□□□□□ -0.12
PHGDH-216ENST00000641375 DNM1P46Q6ZS02 220 aa14.3□□□□□ -0.12
PHGDH-216ENST00000641375 PNLDC1Q8NA58 520 aaKnown RBP14.3□□□□□ -0.12
PHGDH-216ENST00000641375 OR2AE1Q8NHA4 323 aa14.3□□□□□ -0.12
PHGDH-216ENST00000641375 SSC4DQ8WTU2 575 aa14.3□□□□□ -0.12
PHGDH-216ENST00000641375 C12orf4Q9NQ89 552 aa14.3□□□□□ -0.12
PHGDH-216ENST00000641375 IGKV1-9A0A0C4DH69 117 aa14.3□□□□□ -0.12
PHGDH-216ENST00000641375 HMX3A6NHT5 357 aa14.3□□□□□ -0.12
PHGDH-216ENST00000641375 SCGNO76038 276 aa14.3□□□□□ -0.12
PHGDH-216ENST00000641375 CNOT4O95628 575 aaKnown RBP14.3□□□□□ -0.12
PHGDH-216ENST00000641375 TGFBR3Q03167 851 aa14.3□□□□□ -0.12
PHGDH-216ENST00000641375 KLF9Q13886 244 aaPredicted RBP14.3□□□□□ -0.12
PHGDH-216ENST00000641375 GUSBP1Q15486 140 aa14.3□□□□□ -0.12
PHGDH-216ENST00000641375 RAB12Q6IQ22 244 aa14.3□□□□□ -0.12
PHGDH-216ENST00000641375 MTFR2Q6P444 385 aa14.3□□□□□ -0.12
PHGDH-216ENST00000641375 GPER1Q99527 375 aa14.3□□□□□ -0.12
PHGDH-216ENST00000641375 LAMA5O15230 3695 aa14.3□□□□□ -0.12
PHGDH-216ENST00000641375 TRAV18A0A075B6X5 111 aa14.29□□□□□ -0.12
PHGDH-216ENST00000641375 UBBP0CG47 229 aa14.29□□□□□ -0.12
PHGDH-216ENST00000641375 IL32P24001 234 aa14.29□□□□□ -0.12
PHGDH-216ENST00000641375 STOMP27105 288 aa14.29□□□□□ -0.12
PHGDH-216ENST00000641375 HTR2BP41595 481 aa14.29□□□□□ -0.12
PHGDH-216ENST00000641375 PMPCAQ10713 525 aa14.29□□□□□ -0.12
PHGDH-216ENST00000641375 SNTB2Q13425 540 aaKnown RBP14.29□□□□□ -0.12
PHGDH-216ENST00000641375 TFAP2EQ6VUC0 442 aa14.29□□□□□ -0.12
PHGDH-216ENST00000641375 COLCA1Q6ZS62 124 aa14.29□□□□□ -0.12
PHGDH-216ENST00000641375 NOXA1Q86UR1 476 aa14.29□□□□□ -0.12
PHGDH-216ENST00000641375 GCNT2Q8N0V5 402 aa14.29□□□□□ -0.12
PHGDH-216ENST00000641375 DEDD2Q8WXF8 326 aa14.29□□□□□ -0.12
PHGDH-216ENST00000641375 GCDHQ92947 438 aaPredicted RBP14.29□□□□□ -0.12
PHGDH-216ENST00000641375 COPZ2Q9P299 210 aa14.29□□□□□ -0.12
PHGDH-216ENST00000641375 MRPS28Q9Y2Q9 187 aaKnown RBP14.29□□□□□ -0.12
PHGDH-216ENST00000641375 DOCK7Q96N67 2140 aa14.29□□□□□ -0.12
PHGDH-216ENST00000641375 APC2O95996 2303 aa14.29□□□□□ -0.12
PHGDH-216ENST00000641375 RRP8O43159 456 aaKnown RBP14.29□□□□□ -0.12
PHGDH-216ENST00000641375 KDM4BO94953 1096 aa14.29□□□□□ -0.12
PHGDH-216ENST00000641375 QRFPP83859 136 aa14.29□□□□□ -0.12
PHGDH-216ENST00000641375 KISS1Q15726 138 aa14.29□□□□□ -0.12
PHGDH-216ENST00000641375 UBE2V2Q15819 145 aa14.29□□□□□ -0.12
PHGDH-216ENST00000641375 FAM189A2Q15884 450 aa14.29□□□□□ -0.12
PHGDH-216ENST00000641375 ACSF3Q4G176 576 aaPredicted RBP14.29□□□□□ -0.12
PHGDH-216ENST00000641375 OR2W3Q7Z3T1 314 aa14.29□□□□□ -0.12
PHGDH-216ENST00000641375 BIVMQ86UB2 503 aa14.29□□□□□ -0.12
PHGDH-216ENST00000641375 BCL2L2Q92843 193 aaPredicted RBP14.29□□□□□ -0.12
PHGDH-216ENST00000641375 SPSB4Q96A44 273 aa14.29□□□□□ -0.12
PHGDH-216ENST00000641375 CREB3L1Q96BA8 519 aa14.29□□□□□ -0.12
PHGDH-216ENST00000641375 SPACA5Q96QH8 159 aa14.29□□□□□ -0.12
PHGDH-216ENST00000641375 MARVELD1Q9BSK0 173 aa14.29□□□□□ -0.12
PHGDH-216ENST00000641375 KLK11Q9UBX7 282 aa14.29□□□□□ -0.12
PHGDH-216ENST00000641375 LHX6Q9UPM6 363 aa14.29□□□□□ -0.12
PHGDH-216ENST00000641375 CACNA1GO43497 2377 aa14.28□□□□□ -0.12
PHGDH-216ENST00000641375 LOC100509620A0A075B734 347 aa14.28□□□□□ -0.12
PHGDH-216ENST00000641375 MEIOCA2RUB1 952 aa14.28□□□□□ -0.12
PHGDH-216ENST00000641375 RBBP9O75884 186 aa14.28□□□□□ -0.12
PHGDH-216ENST00000641375 VSIG8P0DPA2 414 aa14.28□□□□□ -0.12
PHGDH-216ENST00000641375 ACKR3P25106 362 aa14.28□□□□□ -0.12
PHGDH-216ENST00000641375 PRSS3P35030 304 aa14.28□□□□□ -0.12
PHGDH-216ENST00000641375 GSG1Q2KHT4 349 aa14.28□□□□□ -0.12
PHGDH-216ENST00000641375 NSUN5P2Q63ZY6 315 aa14.28□□□□□ -0.12
PHGDH-216ENST00000641375 OR10K2Q6IF99 312 aa14.28□□□□□ -0.12
PHGDH-216ENST00000641375 GLIPR1L1Q6UWM5 242 aa14.28□□□□□ -0.12
PHGDH-216ENST00000641375 CCDC36Q8IYA8 594 aa14.28□□□□□ -0.12
PHGDH-216ENST00000641375 ZNF101Q8IZC7 436 aa14.28□□□□□ -0.12
PHGDH-216ENST00000641375 PAQR4Q8N4S7 273 aaPredicted RBP14.28□□□□□ -0.12
PHGDH-216ENST00000641375 OR6K3Q8NGY3 331 aa14.28□□□□□ -0.12
PHGDH-216ENST00000641375 SPSB1Q96BD6 273 aa14.28□□□□□ -0.12
PHGDH-216ENST00000641375 CPNE2Q96FN4 548 aaPredicted RBP14.28□□□□□ -0.12
PHGDH-216ENST00000641375 DPAGT1Q9H3H5 408 aa14.28□□□□□ -0.12
PHGDH-216ENST00000641375 PLSCR3Q9NRY6 295 aa14.28□□□□□ -0.12
PHGDH-216ENST00000641375 B3GNT2Q9NY97 397 aa14.28□□□□□ -0.12
PHGDH-216ENST00000641375 TAS2R8Q9NYW2 309 aa14.28□□□□□ -0.12
PHGDH-216ENST00000641375 DKK4Q9UBT3 224 aa14.28□□□□□ -0.12
PHGDH-216ENST00000641375 GHRLQ9UBU3 117 aa14.28□□□□□ -0.12
PHGDH-216ENST00000641375 BOLA1Q9Y3E2 137 aa14.28□□□□□ -0.12
PHGDH-216ENST00000641375 ACACAQ13085 2346 aa14.28□□□□□ -0.12
PHGDH-216ENST00000641375 hCG_38984A0A1B0GV85 526 aa14.27□□□□□ -0.12
PHGDH-216ENST00000641375 C5orf49A4QMS7 147 aa14.27□□□□□ -0.12
PHGDH-216ENST00000641375 ZNF503-AS2A6NEH8 195 aa14.27□□□□□ -0.12
PHGDH-216ENST00000641375 NAP1L6A6NFF2 107 aa14.27□□□□□ -0.12
PHGDH-216ENST00000641375 K7ENP7 123 aa14.27□□□□□ -0.12
PHGDH-216ENST00000641375 SULT1C2O00338 296 aa14.27□□□□□ -0.12
PHGDH-216ENST00000641375 ZNHIT1O43257 154 aa14.27□□□□□ -0.12
PHGDH-216ENST00000641375 BTCP35070 178 aa14.27□□□□□ -0.12
PHGDH-216ENST00000641375 GSK3AP49840 483 aa14.27□□□□□ -0.12
PHGDH-216ENST00000641375 FAM3AP98173 230 aa14.27□□□□□ -0.12
PHGDH-216ENST00000641375 SSBP1Q04837 148 aaKnown RBP14.27□□□□□ -0.12
PHGDH-216ENST00000641375 CNN3Q15417 329 aaKnown RBP14.27□□□□□ -0.12
PHGDH-216ENST00000641375 HIKESHIQ53FT3 197 aa14.27□□□□□ -0.12
PHGDH-216ENST00000641375 PLA1AQ53H76 456 aa14.27□□□□□ -0.12
PHGDH-216ENST00000641375 ESCO2Q56NI9 601 aa14.27□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 58.2 ms