RNA–Protein interactions for RNA: ENST00000641009.1

LINC00339-211, long intergenic non-protein coding RNA 339, humanhuman

Gene LINC00339, Length 1,450 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00339-211ENST00000641009 SHFQ7M4L6 423 aa11.52□□□□□ -0.56
LINC00339-211ENST00000641009 HS3ST5Q8IZT8 346 aa11.52□□□□□ -0.56
LINC00339-211ENST00000641009 PNLDC1Q8NA58 520 aaKnown RBP11.52□□□□□ -0.56
LINC00339-211ENST00000641009 OR1M1Q8NGA1 313 aa11.52□□□□□ -0.56
LINC00339-211ENST00000641009 OR52H1Q8NGJ2 320 aa11.52□□□□□ -0.56
LINC00339-211ENST00000641009 CANT1Q8WVQ1 401 aa11.52□□□□□ -0.56
LINC00339-211ENST00000641009 SEH1LQ96EE3 360 aa11.52□□□□□ -0.56
LINC00339-211ENST00000641009 PGAM5Q96HS1 289 aa11.52□□□□□ -0.56
LINC00339-211ENST00000641009 WDFY2Q96P53 400 aa11.52□□□□□ -0.56
LINC00339-211ENST00000641009 PAPOLGQ9BWT3 736 aaKnown RBP11.52□□□□□ -0.56
LINC00339-211ENST00000641009 OR10A2Q9H208 303 aa11.52□□□□□ -0.56
LINC00339-211ENST00000641009 C1orf21Q9H246 121 aa11.52□□□□□ -0.56
LINC00339-211ENST00000641009 PRDM13Q9H4Q3 707 aa11.52□□□□□ -0.56
LINC00339-211ENST00000641009 SP140LQ9H930 580 aa11.52□□□□□ -0.56
LINC00339-211ENST00000641009 PDP1Q9P0J1 537 aaPredicted RBP11.52□□□□□ -0.56
LINC00339-211ENST00000641009 DUX4Q9UBX2 424 aa11.52□□□□□ -0.56
LINC00339-211ENST00000641009 RHBDD3Q9Y3P4 386 aa11.52□□□□□ -0.56
LINC00339-211ENST00000641009 CENPVL3A0A0U1RRI6 287 aa11.51□□□□□ -0.57
LINC00339-211ENST00000641009 SRRM5B3KS81 715 aa11.51□□□□□ -0.57
LINC00339-211ENST00000641009 PRR23D1E9PI22 279 aaPredicted RBP11.51□□□□□ -0.57
LINC00339-211ENST00000641009 P2RY10O00398 339 aa11.51□□□□□ -0.57
LINC00339-211ENST00000641009 GNGT2O14610 69 aa11.51□□□□□ -0.57
LINC00339-211ENST00000641009 LIPFP07098 398 aa11.51□□□□□ -0.57
LINC00339-211ENST00000641009 PRR23D2P0DMB1 279 aaPredicted RBP11.51□□□□□ -0.57
LINC00339-211ENST00000641009 ARF6P62330 175 aa11.51□□□□□ -0.57
LINC00339-211ENST00000641009 GK3PQ14409 553 aa11.51□□□□□ -0.57
LINC00339-211ENST00000641009 GINS1Q14691 196 aa11.51□□□□□ -0.57
LINC00339-211ENST00000641009 METTL11BQ5VVY1 283 aa11.51□□□□□ -0.57
LINC00339-211ENST00000641009 WDR82Q6UXN9 313 aa11.51□□□□□ -0.57
LINC00339-211ENST00000641009 Q6YL49 198 aa11.51□□□□□ -0.57
LINC00339-211ENST00000641009 RHOUQ7L0Q8 258 aa11.51□□□□□ -0.57
LINC00339-211ENST00000641009 THEM6Q8WUY1 208 aa11.51□□□□□ -0.57
LINC00339-211ENST00000641009 ST8SIA4Q92187 359 aa11.51□□□□□ -0.57
LINC00339-211ENST00000641009 TMIGD2Q96BF3 282 aa11.51□□□□□ -0.57
LINC00339-211ENST00000641009 SIRPDQ9H106 197 aa11.51□□□□□ -0.57
LINC00339-211ENST00000641009 RNPEPL1Q9HAU8 725 aa11.51□□□□□ -0.57
LINC00339-211ENST00000641009 KIF17Q9P2E2 1029 aa11.51□□□□□ -0.57
LINC00339-211ENST00000641009 FAM181BA6NEQ2 426 aa11.51□□□□□ -0.57
LINC00339-211ENST00000641009 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP11.51□□□□□ -0.57
LINC00339-211ENST00000641009 LYNP07948 512 aa11.51□□□□□ -0.57
LINC00339-211ENST00000641009 PRKACGP22612 351 aa11.51□□□□□ -0.57
LINC00339-211ENST00000641009 CFL1P23528 166 aaKnown RBP11.51□□□□□ -0.57
LINC00339-211ENST00000641009 GNALP38405 381 aa11.51□□□□□ -0.57
LINC00339-211ENST00000641009 NAA10P41227 235 aaPredicted RBP11.51□□□□□ -0.57
LINC00339-211ENST00000641009 BPIFB3P59826 476 aa11.51□□□□□ -0.57
LINC00339-211ENST00000641009 MICBQ29980 383 aa11.51□□□□□ -0.57
LINC00339-211ENST00000641009 WDR38Q5JTN6 314 aa11.51□□□□□ -0.57
LINC00339-211ENST00000641009 PRR31Q5SQ13 230 aa11.51□□□□□ -0.57
LINC00339-211ENST00000641009 HIST2H2ABQ8IUE6 130 aaPredicted RBP11.51□□□□□ -0.57
LINC00339-211ENST00000641009 CPOQ8IVL8 374 aa11.51□□□□□ -0.57
LINC00339-211ENST00000641009 BBS1Q8NFJ9 593 aa11.51□□□□□ -0.57
LINC00339-211ENST00000641009 OTOSQ8NHW6 89 aa11.51□□□□□ -0.57
LINC00339-211ENST00000641009 LHX4Q969G2 390 aa11.51□□□□□ -0.57
LINC00339-211ENST00000641009 CCL13Q99616 98 aa11.51□□□□□ -0.57
LINC00339-211ENST00000641009 KAAG1Q9UBP8 84 aa11.51□□□□□ -0.57
LINC00339-211ENST00000641009 KLHDC2Q9Y2U9 406 aa11.51□□□□□ -0.57
LINC00339-211ENST00000641009 AQP12BA6NM10 295 aa11.5□□□□□ -0.57
LINC00339-211ENST00000641009 CDIPTO14735 213 aa11.5□□□□□ -0.57
LINC00339-211ENST00000641009 E2F6O75461 281 aa11.5□□□□□ -0.57
LINC00339-211ENST00000641009 TIPRLO75663 272 aa11.5□□□□□ -0.57
LINC00339-211ENST00000641009 OSMP13725 252 aa11.5□□□□□ -0.57
LINC00339-211ENST00000641009 MUC1P15941 1255 aaPredicted RBP11.5□□□□□ -0.57
LINC00339-211ENST00000641009 ACKR3P25106 362 aa11.5□□□□□ -0.57
LINC00339-211ENST00000641009 GMFBP60983 142 aa11.5□□□□□ -0.57
LINC00339-211ENST00000641009 CDK5Q00535 292 aa11.5□□□□□ -0.57
LINC00339-211ENST00000641009 TMEM236Q5W0B7 351 aa11.5□□□□□ -0.57
LINC00339-211ENST00000641009 FIP1L1Q6UN15 594 aaKnown RBP11.5□□□□□ -0.57
LINC00339-211ENST00000641009 AQP12AQ8IXF9 295 aa11.5□□□□□ -0.57
LINC00339-211ENST00000641009 PDZD9Q8IXQ8 264 aa11.5□□□□□ -0.57
LINC00339-211ENST00000641009 FAM216BQ8N7L0 139 aa11.5□□□□□ -0.57
LINC00339-211ENST00000641009 CSNK2A3Q8NEV1 391 aa11.5□□□□□ -0.57
LINC00339-211ENST00000641009 GATAD2BQ8WXI9 593 aa11.5□□□□□ -0.57
LINC00339-211ENST00000641009 ITPKCQ96DU7 683 aa11.5□□□□□ -0.57
LINC00339-211ENST00000641009 LYZL4Q96KX0 146 aa11.5□□□□□ -0.57
LINC00339-211ENST00000641009 CHIAQ9BZP6 476 aa11.5□□□□□ -0.57
LINC00339-211ENST00000641009 TLNRD1Q9H1K6 362 aa11.5□□□□□ -0.57
LINC00339-211ENST00000641009 ZNF696Q9H7X3 374 aa11.5□□□□□ -0.57
LINC00339-211ENST00000641009 NOX4Q9NPH5 578 aa11.5□□□□□ -0.57
LINC00339-211ENST00000641009 ACOXLQ9NUZ1 547 aa11.5□□□□□ -0.57
LINC00339-211ENST00000641009 RPUSD1Q9UJJ7 312 aaKnown RBP11.5□□□□□ -0.57
LINC00339-211ENST00000641009 WNK1Q9H4A3 2382 aa11.49□□□□□ -0.57
LINC00339-211ENST00000641009 IGHV1-69DA0A0B4J2H0 117 aa11.49□□□□□ -0.57
LINC00339-211ENST00000641009 ANXA2P2A6NMY6 339 aa11.49□□□□□ -0.57
LINC00339-211ENST00000641009 POM121CA8CG34 1229 aa11.49□□□□□ -0.57
LINC00339-211ENST00000641009 ZNF850A8MQ14 1090 aa11.49□□□□□ -0.57
LINC00339-211ENST00000641009 PRODHO43272 600 aa11.49□□□□□ -0.57
LINC00339-211ENST00000641009 ECDO95905 644 aaPredicted RBP11.49□□□□□ -0.57
LINC00339-211ENST00000641009 IGHV1-69P01742 117 aa11.49□□□□□ -0.57
LINC00339-211ENST00000641009 MELTFP08582 738 aa11.49□□□□□ -0.57
LINC00339-211ENST00000641009 HCCSP53701 268 aa11.49□□□□□ -0.57
LINC00339-211ENST00000641009 PRDX4Q13162 271 aa11.49□□□□□ -0.57
LINC00339-211ENST00000641009 PDCD1Q15116 288 aa11.49□□□□□ -0.57
LINC00339-211ENST00000641009 SPATA24Q86W54 205 aa11.49□□□□□ -0.57
LINC00339-211ENST00000641009 GALNT4Q8N4A0 578 aa11.49□□□□□ -0.57
LINC00339-211ENST00000641009 FTMTQ8N4E7 242 aa11.49□□□□□ -0.57
LINC00339-211ENST00000641009 ZNF454Q8N9F8 522 aa11.49□□□□□ -0.57
LINC00339-211ENST00000641009 OR5T2Q8NGG2 359 aa11.49□□□□□ -0.57
LINC00339-211ENST00000641009 RPL3LQ92901 407 aaKnown RBP11.49□□□□□ -0.57
LINC00339-211ENST00000641009 MICU1Q9BPX6 476 aa11.49□□□□□ -0.57
LINC00339-211ENST00000641009 FGF23Q9GZV9 251 aaPredicted RBP11.49□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms