RNA–Protein interactions for RNA: ENST00000640916.1

SCARB2-226, Transcript of scavenger receptor class B member 2, humanhuman

TSL 2

Gene SCARB2, Length 689 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-226ENST00000640916 A6NIZ1 184 aa6.4□□□□□ -1.38
SCARB2-226ENST00000640916 ODF3BA8MYP8 253 aa6.4□□□□□ -1.38
SCARB2-226ENST00000640916 SIGLEC5O15389 551 aa6.4□□□□□ -1.38
SCARB2-226ENST00000640916 SERPINB7O75635 380 aa6.4□□□□□ -1.38
SCARB2-226ENST00000640916 LPLP06858 475 aa6.4□□□□□ -1.38
SCARB2-226ENST00000640916 ACAA1P09110 424 aaPredicted RBP6.4□□□□□ -1.38
SCARB2-226ENST00000640916 FRMD6-AS1P0C7T7 363 aa6.4□□□□□ -1.38
SCARB2-226ENST00000640916 GPX2P18283 190 aa6.4□□□□□ -1.38
SCARB2-226ENST00000640916 PAICSP22234 425 aaKnown RBP6.4□□□□□ -1.38
SCARB2-226ENST00000640916 COX7A1P24310 79 aa6.4□□□□□ -1.38
SCARB2-226ENST00000640916 RBM34P42696 430 aaKnown RBP6.4□□□□□ -1.38
SCARB2-226ENST00000640916 CRYBA2P53672 197 aa6.4□□□□□ -1.38
SCARB2-226ENST00000640916 RAP1BP61224 184 aa6.4□□□□□ -1.38
SCARB2-226ENST00000640916 RAP1AP62834 184 aa6.4□□□□□ -1.38
SCARB2-226ENST00000640916 ZNF92Q03936 586 aa6.4□□□□□ -1.38
SCARB2-226ENST00000640916 ECH1Q13011 328 aa6.4□□□□□ -1.38
SCARB2-226ENST00000640916 BLMHQ13867 455 aa6.4□□□□□ -1.38
SCARB2-226ENST00000640916 SNAI3Q3KNW1 292 aa6.4□□□□□ -1.38
SCARB2-226ENST00000640916 MESTQ5EB52 335 aa6.4□□□□□ -1.38
SCARB2-226ENST00000640916 C6orf10Q5SRN2 563 aa6.4□□□□□ -1.38
SCARB2-226ENST00000640916 LRIF1Q5T3J3 769 aa6.4□□□□□ -1.38
SCARB2-226ENST00000640916 CORO6Q6QEF8 472 aa6.4□□□□□ -1.38
SCARB2-226ENST00000640916 OR2W3Q7Z3T1 314 aa6.4□□□□□ -1.38
SCARB2-226ENST00000640916 MAVSQ7Z434 540 aa6.4□□□□□ -1.38
SCARB2-226ENST00000640916 WFDC3Q8IUB2 231 aa6.4□□□□□ -1.38
SCARB2-226ENST00000640916 OR1M1Q8NGA1 313 aa6.4□□□□□ -1.38
SCARB2-226ENST00000640916 OR5K1Q8NHB7 308 aa6.4□□□□□ -1.38
SCARB2-226ENST00000640916 ISOC1Q96CN7 298 aa6.4□□□□□ -1.38
SCARB2-226ENST00000640916 MALSU1Q96EH3 234 aa6.4□□□□□ -1.38
SCARB2-226ENST00000640916 RAX2Q96IS3 184 aa6.4□□□□□ -1.38
SCARB2-226ENST00000640916 RAB3IPQ96QF0 476 aaPredicted RBP6.4□□□□□ -1.38
SCARB2-226ENST00000640916 KRTAP4-6Q9BYQ5 205 aa6.4□□□□□ -1.38
SCARB2-226ENST00000640916 HDHD2Q9H0R4 259 aa6.4□□□□□ -1.38
SCARB2-226ENST00000640916 DNTTIP1Q9H147 329 aa6.4□□□□□ -1.38
SCARB2-226ENST00000640916 RMND5AQ9H871 391 aa6.4□□□□□ -1.38
SCARB2-226ENST00000640916 PNRC2Q9NPJ4 139 aaKnown RBP6.4□□□□□ -1.38
SCARB2-226ENST00000640916 C19orf12Q9NSK7 152 aa6.4□□□□□ -1.38
SCARB2-226ENST00000640916 VNN3Q9NY84 501 aa6.4□□□□□ -1.38
SCARB2-226ENST00000640916 HAO2Q9NYQ3 351 aa6.4□□□□□ -1.38
SCARB2-226ENST00000640916 MRPL15Q9P015 296 aaKnown RBP6.4□□□□□ -1.38
SCARB2-226ENST00000640916 VAPAQ9P0L0 249 aa6.4□□□□□ -1.38
SCARB2-226ENST00000640916 RPS6KA6Q9UK32 745 aa6.4□□□□□ -1.38
SCARB2-226ENST00000640916 PITPNC1Q9UKF7 332 aa6.4□□□□□ -1.38
SCARB2-226ENST00000640916 SLC13A4Q9UKG4 626 aa6.4□□□□□ -1.38
SCARB2-226ENST00000640916 ZNF256Q9Y2P7 627 aaPredicted RBP6.4□□□□□ -1.38
SCARB2-226ENST00000640916 COA3Q9Y2R0 106 aaPredicted RBP6.4□□□□□ -1.38
SCARB2-226ENST00000640916 PRSS37A4D1T9 235 aa6.39□□□□□ -1.39
SCARB2-226ENST00000640916 SH2D7A6NKC9 451 aaPredicted RBP6.39□□□□□ -1.39
SCARB2-226ENST00000640916 M0QX08 132 aa6.39□□□□□ -1.39
SCARB2-226ENST00000640916 LCATP04180 440 aa6.39□□□□□ -1.39
SCARB2-226ENST00000640916 NDUFB7P17568 137 aa6.39□□□□□ -1.39
SCARB2-226ENST00000640916 POLR2JP52435 117 aaKnown RBP6.39□□□□□ -1.39
SCARB2-226ENST00000640916 SLC25A1P53007 311 aa6.39□□□□□ -1.39
SCARB2-226ENST00000640916 LGALS4P56470 323 aa6.39□□□□□ -1.39
SCARB2-226ENST00000640916 CKAP4Q07065 602 aaKnown RBP6.39□□□□□ -1.39
SCARB2-226ENST00000640916 SSX2Q16385 188 aa6.39□□□□□ -1.39
SCARB2-226ENST00000640916 MEP1BQ16820 701 aa6.39□□□□□ -1.39
SCARB2-226ENST00000640916 GFOD2Q3B7J2 385 aa6.39□□□□□ -1.39
SCARB2-226ENST00000640916 KCTD18Q6PI47 426 aaPredicted RBP6.39□□□□□ -1.39
SCARB2-226ENST00000640916 CFAP77Q6ZQR2 320 aa6.39□□□□□ -1.39
SCARB2-226ENST00000640916 FAM122BQ7Z309 247 aa6.39□□□□□ -1.39
SCARB2-226ENST00000640916 OSR2Q8N2R0 312 aa6.39□□□□□ -1.39
SCARB2-226ENST00000640916 C17orf53Q8N3J3 647 aaPredicted RBP6.39□□□□□ -1.39
SCARB2-226ENST00000640916 OR2AE1Q8NHA4 323 aa6.39□□□□□ -1.39
SCARB2-226ENST00000640916 TMEM239Q8WW34 195 aa6.39□□□□□ -1.39
SCARB2-226ENST00000640916 Q96M85 177 aa6.39□□□□□ -1.39
SCARB2-226ENST00000640916 TLNRD1Q9H1K6 362 aa6.39□□□□□ -1.39
SCARB2-226ENST00000640916 ZMAT4Q9H898 229 aa6.39□□□□□ -1.39
SCARB2-226ENST00000640916 HEXA-AS1Q9H8Q6 139 aa6.39□□□□□ -1.39
SCARB2-226ENST00000640916 SDR39U1Q9NRG7 319 aaPredicted RBP6.39□□□□□ -1.39
SCARB2-226ENST00000640916 NOP16Q9Y3C1 178 aaKnown RBP6.39□□□□□ -1.39
SCARB2-226ENST00000640916 ADAM18Q9Y3Q7 739 aa6.39□□□□□ -1.39
SCARB2-226ENST00000640916 TRAV27A0A087WT01 109 aa6.38□□□□□ -1.39
SCARB2-226ENST00000640916 IGLV1-36A0A0B4J1U3 117 aa6.38□□□□□ -1.39
SCARB2-226ENST00000640916 F5H5K5 113 aa6.38□□□□□ -1.39
SCARB2-226ENST00000640916 DCTN6O00399 190 aa6.38□□□□□ -1.39
SCARB2-226ENST00000640916 CDIPTO14735 213 aa6.38□□□□□ -1.39
SCARB2-226ENST00000640916 HTR3BO95264 441 aa6.38□□□□□ -1.39
SCARB2-226ENST00000640916 CCL3L1P16619 93 aa6.38□□□□□ -1.39
SCARB2-226ENST00000640916 SDHAP31040 664 aa6.38□□□□□ -1.39
SCARB2-226ENST00000640916 SLC1A6P48664 564 aa6.38□□□□□ -1.39
SCARB2-226ENST00000640916 ENTPD1P49961 510 aa6.38□□□□□ -1.39
SCARB2-226ENST00000640916 DLX6P56179 175 aa6.38□□□□□ -1.39
SCARB2-226ENST00000640916 TRAP1Q12931 704 aaKnown RBP6.38□□□□□ -1.39
SCARB2-226ENST00000640916 ABCA11PQ4W5N1 156 aa6.38□□□□□ -1.39
SCARB2-226ENST00000640916 GLYATL3Q5SZD4 288 aa6.38□□□□□ -1.39
SCARB2-226ENST00000640916 C9orf66Q5T8R8 295 aa6.38□□□□□ -1.39
SCARB2-226ENST00000640916 TMEM200BQ69YZ2 307 aa6.38□□□□□ -1.39
SCARB2-226ENST00000640916 MRPL21Q7Z2W9 205 aaKnown RBP6.38□□□□□ -1.39
SCARB2-226ENST00000640916 DPY19L4Q7Z388 723 aa6.38□□□□□ -1.39
SCARB2-226ENST00000640916 ZNF329Q86UD4 541 aa6.38□□□□□ -1.39
SCARB2-226ENST00000640916 GLB1L2Q8IW92 636 aa6.38□□□□□ -1.39
SCARB2-226ENST00000640916 MICU2Q8IYU8 434 aa6.38□□□□□ -1.39
SCARB2-226ENST00000640916 FAM185AQ8N0U4 392 aa6.38□□□□□ -1.39
SCARB2-226ENST00000640916 ZNRF1Q8ND25 227 aa6.38□□□□□ -1.39
SCARB2-226ENST00000640916 GJC3Q8NFK1 279 aa6.38□□□□□ -1.39
SCARB2-226ENST00000640916 OR56B2PQ8NGI1 322 aa6.38□□□□□ -1.39
SCARB2-226ENST00000640916 OR51A7Q8NH64 312 aa6.38□□□□□ -1.39
SCARB2-226ENST00000640916 TAMM41Q96BW9 452 aa6.38□□□□□ -1.39
SCARB2-226ENST00000640916 MED30Q96HR3 178 aa6.38□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms